RefSeq NZ_CP024616
DoriC accession number pORI00001056
OriC length 1124 nt
OriC AT content 0.5979
The location of oriC region 6854..7977 nt
Browse in NCBI
OriC map
OriC sequences
TGTTTATTCCTTAGAACAACCATTCATACACAGAGTATTCTAAAAGGTGGATTATGTAAAGTGGATTTATCCACCTTTATGATTCCACCTTTAAACAAGATATATATCTGCTCTTAGCAGAATATAATCACCTTAATTATCAATATATTATACAGATCAAAACAACGGCACAGCCGTCCACCTTTCACAATTCAGAAAACTCAATTCAAACGGCATACCCATCCACCTTTCGATAAAAAAGCGCCAAGCGCACAAAAAATAGGCGTATGGTTATTTTTCAAATAGTTACGTAGCATGTAACCATGACAACAGTTTGATCTCATTATGAGATCGATATGACGGCAACACCTGACGGCATAGTCATCCACCTTTCACGGCATAGCCATCCACCTTTCGCGGCATAGTCATCCACCTTTCGCGGCATAGCCATCCACCTTTCGCGGCATAGCCATCCACCTTTCACGGCATAGCCATCCACCTTTCACGTGAGCATCATGTGAAAAATTACGCATAATTTACTGAAAATAAAAGATAAAAAACATTGGCATTAATTTTGCAAAAGTATTTTAAGTTTCTAAGATCTTAAAGTAGATCTAAAGATCTACATTTAAGATCTAAAGTTTAATAAGTGTTAGAAGCAAAAAATCACAAAAAATCTGTGGATAACTCAGCCGAAAATTACGCATTCACAATTTCTGTGGATAACTCGTTTTGTTAGCAGAGGACAGATCACTTTGAACCAGAACAGCAGCACTTGAAAACGATGTGCTTATTTTTCAACCACTGCGCGTAAGTGCCTGATGTTAACCCGCCGCAATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAATCTAAAGAAGTCAGATCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTTTCTGCCGCTTCGTTCGATAAGACCATGAGGAAAACCATGCGAGATCGAAAAAATCACTCAGAATGCGATACAGCACGTTTTAGAGGGTATTCACAAAACAGTCGTTCCCTTGAGGAAATTTTGATCGAGCTTGAACTACTATCCGGATCATGACAACAGA
TGTTTATTCCTTAGAACAACCATTCATACACAGAGTATTCTAAAAGGTGGATTATGTAAAGTGGATTTATCCACCTTTATGATTCCACCTTTAAACAAGATATATATCTGCTCTTAGCAGAATATAATCACCTTAATTATCAATATATTATACAGATCAAAACAACGGCACAGCCGTCCACCTTTCACAATTCAGAAAACTCAATTCAAACGGCATACCCATCCACCTTTCGATAAAAAAGCGCCAAGCGCACAAAAAATAGGCGTATGGTTATTTTTCAAATAGTTACGTAGCATGTAACCATGACAACAGTTTGATCTCATTATGAGATCGATATGACGGCAACACCTGACGGCATAGTCATCCACCTTTCACGGCATAGCCATCCACCTTTCGCGGCATAGTCATCCACCTTTCGCGGCATAGCCATCCACCTTTCGCGGCATAGCCATCCACCTTTCACGGCATAGCCATCCACCTTTCACGTGAGCATCATGTGAAAAATTACGCATAATTTACTGAAAATAAAAGATAAAAAACATTGGCATTAATTTTGCAAAAGTATTTTAAGTTTCTAAGATCTTAAAGTAGATCTAAAGATCTACATTTAAGATCTAAAGTTTAATAAGTGTTAGAAGCAAAAAATCACAAAAAATCTGTGGATAACTCAGCCGAAAATTACGCATTCACAATTTCTGTGGATAACTCGTTTTGTTAGCAGAGGACAGATCACTTTGAACCAGAACAGCAGCACTTGAAAACGATGTGCTTATTTTTCAACCACTGCGCGTAAGTGCCTGATGTTAACCCGCCGCAATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAATCTAAAGAAGTCAGATCATACGATCCGTTGATTGATCCTTTTTGGATCTTTCACTGAGAAGCCCTGAATCGCTTTCTGCCGCTTCGTTCGATAAGACCATGAGGAAAACCATGCGAGATCGAAAAAATCACTCAGAATGCGATACAGCACGTTTTAGAGGGTATTCACAAAACAGTCGTTCCCTTGAGGAAATTTTGATCGAGCTTGAACTACTATCCGGATCATGACAACAGA
AT-rich region
The information of repeat sequences

Motif CGGCATAGCCATCCACCTTTC

StartP-valueSite
4631.66e-13CCACCTTTCACGGCATAGCCATCCACCTTTCACGTGAGCAT
4411.66e-13CCACCTTTCGCGGCATAGCCATCCACCTTTCACGGCATAGC
4191.66e-13CCACCTTTCGCGGCATAGCCATCCACCTTTCGCGGCATAGC
3751.66e-13CCACCTTTCACGGCATAGCCATCCACCTTTCGCGGCATAGT
3973.63e-13CCACCTTTCGCGGCATAGTCATCCACCTTTCGCGGCATAGC

Motif ACGGCAYASYCRTCCACCTTTC

StartP-valueSite
1651.49e-13GATCAAAACAACGGCACAGCCGTCCACCTTTCACAATTCAGA
3522.13e-13GCAACACCTGACGGCATAGTCATCCACCTTTCACGGCATAGC
2103.19e-13CTCAATTCAAACGGCATACCCATCCACCTTTCGATAAAAAAG

Motif TCBGCTKCBKCGHTCGVTAWSWCS

StartP-valueSite
8576.42e-12GCTCGGTCGTTCGGCTGCGGCGAGCGGTGTCTCCTTTCTCAAAA
9651.12e-11TGAATCGCTTTCTGCCGCTTCGTTCGATAAGACCATGAGGAAAA
8192.30e-10CCGCCGCAATTCCGCTTCCTCGCTCACTAACTCGCTACGCTCGG
3185.80e-10AACAGTTTGATCTCATTATGAGATCGATATGACGGCAACACCTG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00001056 100.0 1124 0 0 1 1124 1 1124 0.0 2076
pORI00001056 96.552 87 3 0 397 483 353 439 2.26e-35 145
pORI00001056 96.552 87 3 0 353 439 397 483 2.26e-35 145
pORI00001056 97.674 43 1 0 441 483 353 395 3.01e-14 75
pORI00001056 97.674 43 1 0 353 395 441 483 3.01e-14 75
pORI00001020 100.0 1124 0 0 1 1124 1124 1 0.0 2076
pORI00001020 95.556 90 4 0 353 442 728 639 2.26e-35 145
pORI00001020 95.556 90 4 0 397 486 772 683 2.26e-35 145
pORI00001020 95.652 46 2 0 353 398 684 639 3.01e-14 75
pORI00001020 95.652 46 2 0 441 486 772 727 3.01e-14 75
pORI00001011 100.0 1124 0 0 1 1124 1 1124 0.0 2076
pORI00001011 96.552 87 3 0 397 483 353 439 2.26e-35 145
pORI00001011 96.552 87 3 0 353 439 397 483 2.26e-35 145
pORI00001011 97.674 43 1 0 441 483 353 395 3.01e-14 75
pORI00001011 97.674 43 1 0 353 395 441 483 3.01e-14 75
pORI00001144 99.911 1125 0 1 1 1124 1125 1 0.0 2071
pORI00001144 95.556 90 4 0 353 442 728 639 2.26e-35 145
pORI00001144 95.556 90 4 0 397 486 772 683 2.26e-35 145
pORI00001144 95.652 46 2 0 353 398 684 639 3.01e-14 75
pORI00001144 95.652 46 2 0 441 486 772 727 3.01e-14 75
pORI00001164 98.577 1124 16 0 1 1124 1 1124 0.0 1988
pORI00001164 96.552 87 3 0 397 483 353 439 2.26e-35 145
pORI00001164 95.402 87 4 0 353 439 397 483 1.05e-33 139
pORI00001164 97.674 43 1 0 441 483 353 395 3.01e-14 75
pORI00001164 95.349 43 2 0 353 395 441 483 1.4e-12 69
pORI00000834 98.577 1124 16 0 1 1124 1 1124 0.0 1988
pORI00000834 96.552 87 3 0 397 483 353 439 2.26e-35 145
pORI00000834 95.402 87 4 0 353 439 397 483 1.05e-33 139
pORI00000834 97.674 43 1 0 441 483 353 395 3.01e-14 75
pORI00000834 95.349 43 2 0 353 395 441 483 1.4e-12 69
pORI00001057 83.382 692 94 16 443 1124 331 1011 0.0 621
pORI00000921 83.552 687 90 17 449 1124 702 28 0.0 621
pORI00000947 81.552 786 111 20 362 1124 261 1035 0.0 617
pORI00000446 85.406 603 72 13 531 1124 623 28 0.0 612
pORI00000421 85.284 598 80 7 531 1124 818 225 0.0 610
pORI00000702 83.092 692 94 18 443 1124 331 1009 0.0 608
pORI00000031 83.016 683 95 16 451 1124 895 225 0.0 599
pORI00000072 90.099 404 39 1 721 1124 435 837 0.0 523
pORI00001062 89.604 404 41 1 721 1124 495 897 0.0 512
pORI00000990 88.366 404 47 0 721 1124 771 368 0.0 486
pORI00000343 93.151 73 5 0 818 890 244 316 2.97e-24 108
pORI00000308 95.455 66 3 0 809 874 808 743 1.07e-23 106
pORI00000914 92.958 71 3 1 817 887 710 642 1.38e-22 102
pORI00000595 92.958 71 3 1 817 887 710 642 1.38e-22 102
pORI00000478 92.958 71 3 1 817 887 354 286 1.38e-22 102
pORI00000094 98.276 58 1 0 817 874 1107 1164 1.38e-22 102
pORI00000093 98.276 58 1 0 817 874 191 248 1.38e-22 102
pORI00000320 91.667 72 6 0 818 889 870 799 4.97e-22 100
pORI00000315 91.667 72 6 0 818 889 1503 1432 4.97e-22 100
pORI00000312 91.667 72 6 0 818 889 870 799 4.97e-22 100
pORI00000309 91.667 72 6 0 818 889 799 728 4.97e-22 100
pORI00000111 95.238 63 3 0 819 881 781 719 4.97e-22 100
pORI00000307 96.61 59 2 0 817 875 996 938 1.79e-21 99
pORI00000116 96.61 59 2 0 817 875 996 938 1.79e-21 99
pORI00000110 96.61 59 2 0 817 875 2869 2811 1.79e-21 99
pORI00000098 96.61 59 2 0 817 875 996 938 1.79e-21 99
pORI00000095 96.61 59 2 0 817 875 996 938 1.79e-21 99
pORI00000301 90.278 72 7 0 818 889 939 868 2.31e-20 95
pORI00000294 96.491 57 2 0 818 874 372 428 2.31e-20 95
pORI00000292 96.491 57 2 0 818 874 372 428 2.31e-20 95
pORI00000290 96.491 57 2 0 818 874 363 419 2.31e-20 95
pORI00000239 96.491 57 2 0 818 874 186 242 2.31e-20 95
pORI00000224 90.278 72 7 0 818 889 939 868 2.31e-20 95
pORI00000223 90.278 72 7 0 818 889 939 868 2.31e-20 95
pORI00000222 90.278 72 7 0 818 889 939 868 2.31e-20 95
pORI00000097 90.278 72 7 0 818 889 939 868 2.31e-20 95
pORI00000058 90.278 72 7 0 818 889 756 685 2.31e-20 95
pORI00000240 92.424 66 3 2 825 890 1151 1088 8.32e-20 94
pORI00000092 86.957 69 8 1 821 889 935 868 8.38e-15 77