RefSeq NC_019102
DoriC accession number pORI00000308
OriC length 920 nt
OriC AT content 0.4804
The location of oriC region 118..1037 nt
Browse in NCBI
OriC map
OriC sequences
CATTGTTATTGTGTTGTAAGGTGAGTTGCGTTTTTGTAAGAAGATTGAAGCAACCACTTGAGATTTTTTTTGCGTGTGATTTATTGTCTTTAAACGAAAAAACCCACGTTATTAGGCGTGGGTTTTTTCGAAGGTTAGAAGTTTCGCGGACTATCTAACCCAAGGTAACAGGGTGTACAAGACCGCTGCAACCAAATCTGCCCTTTCAGTGTAGCCGCAGTTGGTCCTTCACTTCAAGATCTACGTATCAGCAATTTCTTGTACACCCTCTACCAATGGCTGCTGCCAATGGCGTTAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGGGCCGAGATACCAACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGGTTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCGGCGTGGCCTTTTCCGGGTTCTTGTTTTTTGCTCACATGTTTCTTTTGGTGTTATCCCCTGATTCTGTGGATAACCGCATTACTGTCTTTGAGTGAGCTTATACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTCAGTGAGCGAGGAAGCGGAATAGCGCCGGAAGCTGCATTTTCTCCTTACGCATCTGTGCGGCATTTCTACCCGGCATGGCGCACTTTTCATACAATCCGCACTGATGCCGCATGGTTAAGTCAGTATACACTCCGCTATCG
CATTGTTATTGTGTTGTAAGGTGAGTTGCGTTTTTGTAAGAAGATTGAAGCAACCACTTGAGATTTTTTTTGCGTGTGATTTATTGTCTTTAAACGAAAAAACCCACGTTATTAGGCGTGGGTTTTTTCGAAGGTTAGAAGTTTCGCGGACTATCTAACCCAAGGTAACAGGGTGTACAAGACCGCTGCAACCAAATCTGCCCTTTCAGTGTAGCCGCAGTTGGTCCTTCACTTCAAGATCTACGTATCAGCAATTTCTTGTACACCCTCTACCAATGGCTGCTGCCAATGGCGTTAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGGGCCGAGATACCAACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGGTTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCGGCGTGGCCTTTTCCGGGTTCTTGTTTTTTGCTCACATGTTTCTTTTGGTGTTATCCCCTGATTCTGTGGATAACCGCATTACTGTCTTTGAGTGAGCTTATACCGCTCGCCGCAGCCGAACGACCGAGCGTAGCGAGTCAGTGAGCGAGGAAGCGGAATAGCGCCGGAAGCTGCATTTTCTCCTTACGCATCTGTGCGGCATTTCTACCCGGCATGGCGCACTTTTCATACAATCCGCACTGATGCCGCATGGTTAAGTCAGTATACACTCCGCTATCG
AT-rich region
The information of repeat sequences

Motif ABGRRAAARCGCC

StartP-valueSite
6251.79e-08GGCGGAGCCTATGGAAAAACGCCAGCGGCGTGG
4372.58e-07AGCGTGAGCTATGAGAAAGCGCCACGCTTCCCG
941.09e-06TTGTCTTTAAACGAAAAAACCCACGTTATTAGG
5301.64e-06GGGAGCCACCAGGGGGAAACGCCTGGTATCTTT
7942.76e-06GAGCGAGGAAGCGGAATAGCGCCGGAAGCTGCA

Motif ATACMMWCMGC

StartP-valueSite
8691.51e-07CGCACTTTTCATACAATCCGCACTGATGCCG
9057.46e-07TTAAGTCAGTATACACTCCGCTATCG
4191.88e-06CCGGGCCGAGATACCAACAGCGTGAGCTATG

Motif ASAAGAYYGMWGCAACCA

StartP-valueSite
1778.21e-11AACAGGGTGTACAAGACCGCTGCAACCAAATCTGCCCT
391.62e-10CGTTTTTGTAAGAAGATTGAAGCAACCACTTGAGATTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000308 100.0 920 0 0 1 920 1 920 0.0 1700
pORI00000309 98.806 921 10 1 1 920 1 921 0.0 1639
pORI00000012 90.089 898 67 20 35 920 54 941 0.0 1146
pORI00000058 93.071 736 37 12 191 920 151 878 0.0 1064
pORI00000320 92.016 739 45 12 191 920 259 992 0.0 1026
pORI00000312 92.016 739 45 12 191 920 259 992 0.0 1026
pORI00000343 88.249 868 83 17 64 920 981 122 0.0 1020
pORI00000112 91.633 741 44 16 191 920 1117 1850 0.0 1013
pORI00000315 94.037 654 34 4 271 920 973 1625 0.0 987
pORI00000306 93.293 656 35 9 271 920 908 256 0.0 959
pORI00000022 86.72 881 84 27 64 920 27 898 0.0 948
pORI00000239 90.979 654 38 14 271 907 727 78 0.0 861
pORI00000301 92.727 550 25 9 271 806 398 946 0.0 780
pORI00000294 92.727 550 25 8 271 806 913 365 0.0 780
pORI00000292 92.727 550 25 8 271 806 913 365 0.0 780
pORI00000290 92.727 550 25 8 271 806 904 356 0.0 780
pORI00000224 92.727 550 25 9 271 806 398 946 0.0 780
pORI00000223 92.727 550 25 9 271 806 398 946 0.0 780
pORI00000222 92.727 550 25 9 271 806 398 946 0.0 780
pORI00000097 92.727 550 25 9 271 806 398 946 0.0 780
pORI00000092 92.407 540 25 10 271 796 398 935 0.0 756
pORI00000111 83.045 808 95 39 124 920 126 902 0.0 697
pORI00000094 79.815 540 79 24 121 654 1744 1229 0.0 366
pORI00000094 86.538 104 13 1 742 845 1165 1063 5.21e-26 113
pORI00000093 79.815 540 79 24 121 654 828 313 0.0 366
pORI00000093 86.538 104 13 1 742 845 249 147 5.21e-26 113
pORI00000008 88.487 304 32 3 271 572 1405 1103 0.0 364
pORI00000086 82.857 385 45 18 271 653 744 379 0.0 326
pORI00000061 82.564 390 45 18 271 657 374 743 0.0 322
pORI00000244 82.597 385 46 16 271 653 450 815 0.0 320
pORI00000043 82.552 384 47 17 271 652 350 715 0.0 320
pORI00000198 79.915 473 59 25 191 651 236 684 0.0 315
pORI00000110 82.199 382 49 16 271 651 2382 2745 0.0 311
pORI00000110 78.453 181 29 8 743 917 2812 2988 6.73e-25 110
pORI00000056 81.522 368 46 19 271 635 210 558 0.0 283
pORI00000060 78.444 450 70 21 191 635 2186 1759 0.0 268
pORI00000307 79.319 382 60 16 271 651 509 872 0.0 250
pORI00000307 98.305 59 1 0 743 801 939 997 3.13e-23 104
pORI00000116 79.319 382 60 16 271 651 509 872 0.0 250
pORI00000116 98.305 59 1 0 743 801 939 997 3.13e-23 104
pORI00000098 79.319 382 60 16 271 651 509 872 0.0 250
pORI00000098 98.305 59 1 0 743 801 939 997 3.13e-23 104
pORI00000095 79.319 382 60 16 271 651 509 872 0.0 250
pORI00000095 98.305 59 1 0 743 801 939 997 3.13e-23 104
pORI00000069 80.061 326 44 16 312 635 3374 3680 0.0 222
pORI00000240 84.889 225 21 9 697 920 1058 1270 0.0 215
pORI00000240 86.957 69 6 2 594 662 1002 1067 2.46e-14 75
pORI00000284 86.301 146 9 3 501 635 349 204 1.43e-36 148
pORI00000234 86.301 146 9 3 501 635 349 204 1.43e-36 148
pORI00000210 86.301 146 9 3 501 635 349 204 1.43e-36 148
pORI00000209 86.301 146 9 3 501 635 349 204 1.43e-36 148
pORI00001057 98.361 61 1 0 743 803 760 700 2.42e-24 108
pORI00000947 98.361 61 1 0 743 803 782 722 2.42e-24 108
pORI00000921 98.361 61 1 0 743 803 279 339 2.42e-24 108
pORI00000446 98.361 61 1 0 743 803 279 339 2.42e-24 108
pORI00000072 98.361 61 1 0 743 803 588 528 2.42e-24 108
pORI00000031 98.361 61 1 0 743 803 474 534 2.42e-24 108
pORI00001164 95.455 66 3 0 743 808 874 809 8.71e-24 106
pORI00001144 95.455 66 3 0 743 808 251 316 8.71e-24 106
pORI00001062 95.455 66 3 0 743 808 648 583 8.71e-24 106
pORI00001056 95.455 66 3 0 743 808 874 809 8.71e-24 106
pORI00001020 95.455 66 3 0 743 808 251 316 8.71e-24 106
pORI00001011 95.455 66 3 0 743 808 874 809 8.71e-24 106
pORI00000834 95.455 66 3 0 743 808 874 809 8.71e-24 106
pORI00000702 96.721 61 2 0 743 803 760 700 1.13e-22 102