RefSeq NC_002119
DoriC accession number pORI00000008
OriC length 1651 nt
OriC AT content 0.4282
The location of oriC region 9239..932 nt
Browse in NCBI
OriC map
OriC sequences
AAAACGCATCCGGCCCAGAGTTCAGCCAGACCGAAAAACAGGCCGATAACCAGGAAAGCCCCGGCCAGACCGTAATACTCCCTGTAAAGCCAGCTGACCCACGGGTAAATCTGCCGGGGCCAGCTCCGGGATATGCCACTGCCAGGTAAGCGAATCCGTATTAAACATGTAATCTCTCTCCTTCAGACGACGGGTTTACCGGCGTGGTGTGCAGCCCCCGCTGCACAAGCCGCGGACATGCCCCAAGGGATGGCGGCGGCGTTCACGTCCGTGGTGACTGCGTTCAGCTTTCACCACGGAGGCCAGCCTCTTTCCGCCCCATGCGGAAAAGGCGCAGCCCGGAGGAACAACGAGCACGCCCCAGCGTGTGAGAGGAAAAGGCGGCACCCCAGTGCGGTCTTTTCCGGTGTTCCGGCCCCCGTCAGAGTTCGCCATAGCGAGCGGCTGACCACCCGCAAAATCAGAGGCAGCTTTGCTGCGTCGTCAGGTGCGTCCAGCACCGTGGATTTTTGTGGGTGGTCGGGCGTGAGCCTGACGGGGGCCGGGTGAATTTCTGGCGTGGCCGGCGTCCAGCCGACAGAACCAGAAAGAGGGGGAAAGACCGTGCGTCGGTGGCGTCCAGCCAGCGTAAGCAGGGGATTGCCCCCTGAAGTCAGCCACGCCCCAGCGGGGATGACTTGCATTTCTCCGCAAGGAGAAAAAAGCAACAGAGATAGGTTAACGTAAAATGTTCAGCGAAAAACCGACATGGTTCACCTATCCTGATAATTGATCGTCAGGCAATAGAAAGACGTAATCAGGGGACAATATCCCACATCAGCGCGTCCGGTGACCGTCTTGCAGGTGCCGGGGAAATTGCGCCTCCTCGCTCACTCGGTCGCTACGCTCCGGCCGTGAGACTGCGGCGGGCGCTGCGGACACATACAAAGTTACCCACAGATTCCGTGTATAAGCAGGGGACTAACATGTGAGGCAAAACAGCAGGGCCGCGCCGGTGGCGTTTTTCCATAGGCTCCGCCCTCCTGCCAGAGTTCACATAAACAGACGCTTTTCCGGTGCATCTGTGGGAGCCGTGAGGCTCAACCATGAATCTGACAGTACGGGCGAAACCCGACAGGACTTAAAGATCCCCACCGTTTCCGGCGGGTCGCTCCCTCTTGCGCTCTCCTGTTCCGACCCTGCCGTTTACCGGATACCTGTTCCGCCTTTCTCCCTTACGGGAAGTGTGGCGCTTTCTCATAGCTCACACACTGGTATCTCGGCTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTAAGCAAGAACTCCCCGTTCAGCCCGACTGCTGCGCCTTATCCGGTAACTGTTCACTTGAGTCCAACCCGGAAAAGCACGGTAAAACGCCACTGGCAGCAGCCATTGGTAACTGGGAGTTCGCAGAGGATTTGTTTAGCTAAACACGCGGTTGCTCTTGAAGTGTGCGCCAAAGTCCGGCTACACTGGAAGGACAGATTTGGTTGCTGTGCTCTGCGAAAGCCAGTTACCACGGTTAAGCAGTTCCCCAACTGACTTAACCTTCGATCAAACCACCTCCCCAGGTGGTTTTTTCGTTTACAGGGCAAAAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTT
AAAACGCATCCGGCCCAGAGTTCAGCCAGACCGAAAAACAGGCCGATAACCAGGAAAGCCCCGGCCAGACCGTAATACTCCCTGTAAAGCCAGCTGACCCACGGGTAAATCTGCCGGGGCCAGCTCCGGGATATGCCACTGCCAGGTAAGCGAATCCGTATTAAACATGTAATCTCTCTCCTTCAGACGACGGGTTTACCGGCGTGGTGTGCAGCCCCCGCTGCACAAGCCGCGGACATGCCCCAAGGGATGGCGGCGGCGTTCACGTCCGTGGTGACTGCGTTCAGCTTTCACCACGGAGGCCAGCCTCTTTCCGCCCCATGCGGAAAAGGCGCAGCCCGGAGGAACAACGAGCACGCCCCAGCGTGTGAGAGGAAAAGGCGGCACCCCAGTGCGGTCTTTTCCGGTGTTCCGGCCCCCGTCAGAGTTCGCCATAGCGAGCGGCTGACCACCCGCAAAATCAGAGGCAGCTTTGCTGCGTCGTCAGGTGCGTCCAGCACCGTGGATTTTTGTGGGTGGTCGGGCGTGAGCCTGACGGGGGCCGGGTGAATTTCTGGCGTGGCCGGCGTCCAGCCGACAGAACCAGAAAGAGGGGGAAAGACCGTGCGTCGGTGGCGTCCAGCCAGCGTAAGCAGGGGATTGCCCCCTGAAGTCAGCCACGCCCCAGCGGGGATGACTTGCATTTCTCCGCAAGGAGAAAAAAGCAACAGAGATAGGTTAACGTAAAATGTTCAGCGAAAAACCGACATGGTTCACCTATCCTGATAATTGATCGTCAGGCAATAGAAAGACGTAATCAGGGGACAATATCCCACATCAGCGCGTCCGGTGACCGTCTTGCAGGTGCCGGGGAAATTGCGCCTCCTCGCTCACTCGGTCGCTACGCTCCGGCCGTGAGACTGCGGCGGGCGCTGCGGACACATACAAAGTTACCCACAGATTCCGTGTATAAGCAGGGGACTAACATGTGAGGCAAAACAGCAGGGCCGCGCCGGTGGCGTTTTTCCATAGGCTCCGCCCTCCTGCCAGAGTTCACATAAACAGACGCTTTTCCGGTGCATCTGTGGGAGCCGTGAGGCTCAACCATGAATCTGACAGTACGGGCGAAACCCGACAGGACTTAAAGATCCCCACCGTTTCCGGCGGGTCGCTCCCTCTTGCGCTCTCCTGTTCCGACCCTGCCGTTTACCGGATACCTGTTCCGCCTTTCTCCCTTACGGGAAGTGTGGCGCTTTCTCATAGCTCACACACTGGTATCTCGGCTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTAAGCAAGAACTCCCCGTTCAGCCCGACTGCTGCGCCTTATCCGGTAACTGTTCACTTGAGTCCAACCCGGAAAAGCACGGTAAAACGCCACTGGCAGCAGCCATTGGTAACTGGGAGTTCGCAGAGGATTTGTTTAGCTAAACACGCGGTTGCTCTTGAAGTGTGCGCCAAAGTCCGGCTACACTGGAAGGACAGATTTGGTTGCTGTGCTCTGCGAAAGCCAGTTACCACGGTTAAGCAGTTCCCCAACTGACTTAACCTTCGATCAAACCACCTCCCCAGGTGGTTTTTTCGTTTACAGGGCAAAAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTT
AT-rich region
The information of repeat sequences

Motif RTAAGCAGRGGAYT

StartP-valueSite
6283.09e-09TCCAGCCAGCGTAAGCAGGGGATTGCCCCCTGAA
9493.03e-08GATTCCGTGTATAAGCAGGGGACTAACATGTGAG
14133.52e-07GTAACTGGGAGTTCGCAGAGGATTTGTTTAGCTA
7933.82e-07ATAGAAAGACGTAATCAGGGGACAATATCCCACA
10379.16e-07CAGAGTTCACATAAACAGACGCTTTTCCGGTGCA

Motif GTGGHTTTTT

StartP-valueSite
5023.30e-07GTCCAGCACCGTGGATTTTTGTGGGTGGTC
15796.21e-07ACCTCCCCAGGTGGTTTTTTCGTTTACAGG
9955.63e-06GGCCGCGCCGGTGGCGTTTTTCCATAGGCT
5465.63e-06CGGGGGCCGGGTGAATTTCTGGCGTGGCCG

Motif GCGTYCAGC

StartP-valueSite
6157.31e-06TGCGTCGGTGGCGTCCAGCCAGCGTAAGC
5667.31e-06GGCGTGGCCGGCGTCCAGCCGACAGAACC
4907.31e-06GTCGTCAGGTGCGTCCAGCACCGTGGATT
2801.23e-05CGTGGTGACTGCGTTCAGCTTTCACCACG
182.20e-05ATCCGGCCCAGAGTTCAGCCAGACCGAAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000008 100.0 1651 0 0 1 1651 1 1651 0.0 3049
pORI00000058 85.379 554 52 20 1103 1651 530 1 0.0 547
pORI00000022 83.122 551 73 19 1103 1643 548 8 0.0 484
pORI00000301 81.528 563 76 25 1103 1651 700 152 0.0 438
pORI00000294 81.528 563 76 25 1103 1651 611 1159 0.0 438
pORI00000292 81.528 563 76 25 1103 1651 611 1159 0.0 438
pORI00000290 81.528 563 76 25 1103 1651 602 1150 0.0 438
pORI00000239 81.528 563 76 25 1103 1651 425 973 0.0 438
pORI00000306 81.383 564 77 22 1103 1651 606 1156 0.0 435
pORI00000224 81.35 563 77 25 1103 1651 700 152 0.0 433
pORI00000223 81.35 563 77 25 1103 1651 700 152 0.0 433
pORI00000222 81.35 563 77 25 1103 1651 700 152 0.0 433
pORI00000097 81.35 563 77 25 1103 1651 700 152 0.0 433
pORI00000092 81.35 563 77 25 1103 1651 700 152 0.0 433
pORI00000343 81.216 559 73 20 1103 1651 473 1009 0.0 422
pORI00000320 80.57 561 75 26 1103 1651 642 104 0.0 401
pORI00000312 80.57 561 75 26 1103 1651 642 104 0.0 401
pORI00000314 76.73 795 124 46 852 1639 767 27 0.0 387
pORI00000075 76.73 795 124 46 852 1639 767 27 0.0 387
pORI00000012 79.891 552 90 17 1103 1651 591 58 0.0 385
pORI00000315 89.251 307 29 4 1103 1407 1275 971 0.0 381
pORI00000112 79.781 549 77 26 1103 1639 1500 974 0.0 374
pORI00000309 88.816 304 31 3 1103 1405 572 271 0.0 370
pORI00000308 88.487 304 32 3 1103 1405 572 271 0.0 364
pORI00000238 78.899 545 74 27 1103 1643 766 259 0.0 331
pORI00000238 95.0 60 3 0 852 911 963 904 3.42e-20 95
pORI00000060 78.899 545 74 27 1103 1643 1822 2329 0.0 331
pORI00000060 93.651 63 4 0 849 911 1621 1683 3.42e-20 95
pORI00000094 77.96 549 75 37 1103 1644 1311 1820 0.0 302
pORI00000093 77.96 549 75 37 1103 1644 395 904 0.0 302
pORI00000111 76.534 554 87 31 1103 1651 555 40 0.0 263
pORI00000111 87.879 66 6 2 985 1049 632 568 1.24e-14 77
pORI00000334 75.36 556 98 30 1096 1641 459 985 0.0 231
pORI00000334 90.411 73 7 0 839 911 254 326 9.51e-21 97
pORI00000322 75.36 556 98 30 1096 1641 459 985 0.0 231
pORI00000322 90.411 73 7 0 839 911 254 326 9.51e-21 97
pORI00000200 74.586 543 97 29 1103 1643 609 106 0.0 200
pORI00000056 77.165 381 51 22 1265 1641 349 1 0.0 189
pORI00000286 72.549 561 106 32 1103 1643 219 751 1.56e-33 139
pORI00000069 94.34 53 3 0 859 911 3808 3756 2.66e-16 82