RefSeq NC_004833
DoriC accession number pORI00000181
OriC length 903 nt
OriC AT content 0.5327
The location of oriC region 1085..499 nt
Browse in NCBI
OriC map
OriC sequences
GGCGGCAAAAGAGCAATGCAGGATAGACAATCATGGTCAGAACGTTAACACGTAGCCCCTGATTGTCCGCCTGCCGCTGGCTCAATTTGAAAACATGGCCATGATTCGGCGCTGAATATCACCGTCTTTGTTGACCAGTGTTTTAGTGACAAATGCTGCATGGTTTTTCGTAGTGTTGTATCCCTTCCAGACTTCATGTGGATCGAGGGCATACGCACAAACCTTACCAGCAACGGGGATTCTAACTAATGCATTTTTTGATTCTAAGTAATTGAGCCAACGAATAATTGTGCTTCTGCTAACTCCAAGTTTTTCAGCTAGGAATTGCTGATCCGCAACGACAGCGCCACACGTAGGATCGATATGCTCCGCTAAAAATGAGTACAGCTTCAGTGCTGATATGCGAATTCTTCTTTGCTTCTTCGAGATCCTCGGTGTTTTTCTTTGCCTCATCTGAAAGTTGTTTCAGTCGTTTTTCTGAATCAATAAACATGATTTTTTCCCTCTAAAAATCCCATGCACTAACGTTGGTTCAAATCTAAGCCATCATGACACATCTGTGCAACACCTTGTTGCGTGTTGTCGCATCCAGGATGCGACAACGTTGTGTCACCCTGGATGCGACAGGTAAACAAAAAACACACTAAAAAAACAACAACTTACAAATCGGCGTAAAAGATCTATTCTAGGCAAGGGTGTTGCGCGCAACGCAACGCCCCTTTGGGGGTGTCGGGGCGAAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTACTCCTCTGCAAGCCTCGCCAGCCGTGATTTTTGCCAGATTTCGTGGTTTTCACGTTCAACAGCTCCTGCACGTTTTTTGCCGTCCGTTCACCGTTAACCCCCGCAGAAATCGGGACAGG
GGCGGCAAAAGAGCAATGCAGGATAGACAATCATGGTCAGAACGTTAACACGTAGCCCCTGATTGTCCGCCTGCCGCTGGCTCAATTTGAAAACATGGCCATGATTCGGCGCTGAATATCACCGTCTTTGTTGACCAGTGTTTTAGTGACAAATGCTGCATGGTTTTTCGTAGTGTTGTATCCCTTCCAGACTTCATGTGGATCGAGGGCATACGCACAAACCTTACCAGCAACGGGGATTCTAACTAATGCATTTTTTGATTCTAAGTAATTGAGCCAACGAATAATTGTGCTTCTGCTAACTCCAAGTTTTTCAGCTAGGAATTGCTGATCCGCAACGACAGCGCCACACGTAGGATCGATATGCTCCGCTAAAAATGAGTACAGCTTCAGTGCTGATATGCGAATTCTTCTTTGCTTCTTCGAGATCCTCGGTGTTTTTCTTTGCCTCATCTGAAAGTTGTTTCAGTCGTTTTTCTGAATCAATAAACATGATTTTTTCCCTCTAAAAATCCCATGCACTAACGTTGGTTCAAATCTAAGCCATCATGACACATCTGTGCAACACCTTGTTGCGTGTTGTCGCATCCAGGATGCGACAACGTTGTGTCACCCTGGATGCGACAGGTAAACAAAAAACACACTAAAAAAACAACAACTTACAAATCGGCGTAAAAGATCTATTCTAGGCAAGGGTGTTGCGCGCAACGCAACGCCCCTTTGGGGGTGTCGGGGCGAAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTACTCCTCTGCAAGCCTCGCCAGCCGTGATTTTTGCCAGATTTCGTGGTTTTCACGTTCAACAGCTCCTGCACGTTTTTTGCCGTCCGTTCACCGTTAACCCCCGCAGAAATCGGGACAGG
AT-rich region
The information of repeat sequences

Motif GTTGWCBCABBCAGGAWGCGA

StartP-valueSite
5791.80e-11CTTGTTGCGTGTTGTCGCATCCAGGATGCGACAACGTTGTG
6043.80e-10ATGCGACAACGTTGTGTCACCCTGGATGCGACAGGTAAACA
7427.64e-09GGGGCGAAGCCCTGACCCAGTCACGTAGCGATAGCGGAGTG
8779.50e-09TCCGTTCACCGTTAACCCCCGCAGAAATCGGGACAGG

Motif AVKTTNWMANCTAGGCMATGATKNTVCGC

StartP-valueSite
6763.54e-11ATCGGCGTAAAAGATCTATTCTAGGCAAGGGTGTTGCGCGCAACGCAAC
844.64e-11CCGCTGGCTCAATTTGAAAACATGGCCATGATTCGGCGCTGAATATCAC
3085.07e-11GCTAACTCCAAGTTTTTCAGCTAGGAATTGCTGATCCGCAACGACAGCG
429.98e-11CATGGTCAGAACGTTAACACGTAGCCCCTGATTGTCCGCCTGCCGCTGG
5295.16e-10GCACTAACGTTGGTTCAAATCTAAGCCATCATGACACATCTGTGCAACA

Motif CRTGDTTTTTNC

StartP-valueSite
8073.17e-07CCTCGCCAGCCGTGATTTTTGCCAGATTTCGT
4911.09e-06AATCAATAAACATGATTTTTTCCCTCTAAAAA
1593.41e-06ACAAATGCTGCATGGTTTTTCGTAGTGTTGTA
8534.13e-06ACAGCTCCTGCACGTTTTTTGCCGTCCGTTCA
8265.33e-06TGCCAGATTTCGTGGTTTTCACGTTCAACAGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000181 100.0 903 0 0 1 903 1 903 0.0 1668
pORI00000011 95.377 411 15 4 494 903 1072 665 0.0 651
pORI00000011 97.561 82 1 1 1 81 82 1 8.43e-34 139
pORI00000124 94.915 413 17 3 494 903 1075 664 0.0 643
pORI00000124 98.765 81 1 0 1 81 81 1 1.81e-35 145
pORI00000315 98.333 60 1 0 725 784 1660 1601 8.55e-24 106
pORI00000306 98.333 60 1 0 725 784 221 280 8.55e-24 106
pORI00000240 98.333 60 1 0 725 784 1305 1246 8.55e-24 106
pORI00000343 96.667 60 2 0 725 784 87 146 3.98e-22 100
pORI00000320 96.667 60 2 0 725 784 1027 968 3.98e-22 100
pORI00000312 96.667 60 2 0 725 784 1027 968 3.98e-22 100
pORI00000309 96.667 60 2 0 725 784 956 897 3.98e-22 100
pORI00000238 96.667 60 2 0 725 784 1117 1058 3.98e-22 100
pORI00000112 96.667 60 2 0 725 784 1885 1826 3.98e-22 100
pORI00000060 96.667 60 2 0 725 784 1470 1529 3.98e-22 100
pORI00000022 96.667 60 2 0 725 784 933 874 3.98e-22 100
pORI00000012 96.667 60 1 1 725 784 975 917 1.43e-21 99
pORI00000058 93.651 63 3 1 725 787 912 851 6.65e-20 94