RefSeq NC_019251
DoriC accession number pORI00000124
OriC length 1075 nt
OriC AT content 0.454
The location of oriC region 18..1092 nt
Browse in NCBI
OriC map
OriC sequences
GCTAGCGGCAGGCGGACAATCAGGGGCTACGTGTTAACGTTCTGACCATGATTGTCTATCCTGCATTGCTCTTTTGCCGCCTCAAAATCCTTTGCGTGTTTTTGCTCCCCGTTCTCCAGAAAAAACCGAGCCGCCACGGTTCCGGCAGCGCCTTGAGCGCTACCGGAAACCGTCTGGGGAGAACCCCAGACCCCCATCGCTGCAACACCGACGGTCTACGACCACCTACCAACCGCATGGCTGCCTGTTCCGTGCAAATGGGCTTTGCAGGGGGCTGGCGCGGTTCCTGGCGACCTGAAAGCCCCTGGTTAGGGGTATCGGCGCGCTTGACCTCCTGAGAGCCTCTGTAAGCGTTTTTCGCGCCTTCCATGCCCTGGCGGGCATCTAAAACCCGTTTCGTGCGTCTGAGAGCTTTTGAGCGCGTTTGAGGGGCTATCTGGCGACTCATCCCCAAAAGAACAACACCGGGATCACCGACAACATGCGAGAGGTGATCCCGCTCGCCGCAAGTCGATGACCGAGCGTAGCGAGCGAATCGACGAGGAAGCGGAAGAGAACCGGAAGCCACATTGAGCACTTACGCACTGATGCGGGGTGTCGGGGTGAAGCCCTGACCAAGTGGTAATCGTATCGGCGTGCATGCGCGGTTATACGATTACACATCCTGTCCCGATTTCTGAGGCGTTTTAACGGTGAACGGACGGCAAAAACACGATGGAGCTGTTGAACGTGAAAACCACGAAATCTGGCAAAAATCACGTCTGGCGAGGCTTGCATAGGAGTAAGCCAGTATACACTCCGCTATCGCTACGTGACACTGGGTCAGGGCTTCGCCCCGACACCCCCCAAAGGGCGTTGCGTTGCACGCAACACCCTTGCCTAGAATAGATCTTTTACGCCGATTTGTAAGTGGTTGTTTTTTTAGTGTGTTTTTTATTTACCTGTCGCATCCAGGATGACACAACGTTGTCGCATCCAGGATGCGACAACACGCAACAAGGTGTTGCACAGATGTGTCATGATGGCTTAGATTTGAACCAACGTTAGTGCATGGGATTTTCAGAGGGAAAAAATC
GCTAGCGGCAGGCGGACAATCAGGGGCTACGTGTTAACGTTCTGACCATGATTGTCTATCCTGCATTGCTCTTTTGCCGCCTCAAAATCCTTTGCGTGTTTTTGCTCCCCGTTCTCCAGAAAAAACCGAGCCGCCACGGTTCCGGCAGCGCCTTGAGCGCTACCGGAAACCGTCTGGGGAGAACCCCAGACCCCCATCGCTGCAACACCGACGGTCTACGACCACCTACCAACCGCATGGCTGCCTGTTCCGTGCAAATGGGCTTTGCAGGGGGCTGGCGCGGTTCCTGGCGACCTGAAAGCCCCTGGTTAGGGGTATCGGCGCGCTTGACCTCCTGAGAGCCTCTGTAAGCGTTTTTCGCGCCTTCCATGCCCTGGCGGGCATCTAAAACCCGTTTCGTGCGTCTGAGAGCTTTTGAGCGCGTTTGAGGGGCTATCTGGCGACTCATCCCCAAAAGAACAACACCGGGATCACCGACAACATGCGAGAGGTGATCCCGCTCGCCGCAAGTCGATGACCGAGCGTAGCGAGCGAATCGACGAGGAAGCGGAAGAGAACCGGAAGCCACATTGAGCACTTACGCACTGATGCGGGGTGTCGGGGTGAAGCCCTGACCAAGTGGTAATCGTATCGGCGTGCATGCGCGGTTATACGATTACACATCCTGTCCCGATTTCTGAGGCGTTTTAACGGTGAACGGACGGCAAAAACACGATGGAGCTGTTGAACGTGAAAACCACGAAATCTGGCAAAAATCACGTCTGGCGAGGCTTGCATAGGAGTAAGCCAGTATACACTCCGCTATCGCTACGTGACACTGGGTCAGGGCTTCGCCCCGACACCCCCCAAAGGGCGTTGCGTTGCACGCAACACCCTTGCCTAGAATAGATCTTTTACGCCGATTTGTAAGTGGTTGTTTTTTTAGTGTGTTTTTTATTTACCTGTCGCATCCAGGATGACACAACGTTGTCGCATCCAGGATGCGACAACACGCAACAAGGTGTTGCACAGATGTGTCATGATGGCTTAGATTTGAACCAACGTTAGTGCATGGGATTTTCAGAGGGAAAAAATC
AT-rich region
The information of repeat sequences

Motif ABCTYYTGHGCSBNTTTGTDAGBSKTTBT

StartP-valueSite
8898.82e-13CCTAGAATAGATCTTTTACGCCGATTTGTAAGTGGTTGTTTTTTTAGTG
3301.02e-11GGCGCGCTTGACCTCCTGAGAGCCTCTGTAAGCGTTTTTCGCGCCTTCC
4102.60e-11TGCGTCTGAGAGCTTTTGAGCGCGTTTGAGGGGCTATCTGGCGACTCAT
6604.63e-11ATACGATTACACATCCTGTCCCGATTTCTGAGGCGTTTTAACGGTGAAC
872.58e-10CCGCCTCAAAATCCTTTGCGTGTTTTTGCTCCCCGTTCTCCAGAAAAAA

Motif TTTTTTAKT

StartP-valueSite
9301.55e-06TTTTAGTGTGTTTTTTATTTACCTGTCGC
9183.43e-06AAGTGGTTGTTTTTTTAGTGTGTTTTTTA

Motif SATCCMSVWHGCNRCAACAC

StartP-valueSite
9731.36e-10AACGTTGTCGCATCCAGGATGCGACAACACGCAACAAGGT
9481.52e-08TTACCTGTCGCATCCAGGATGACACAACGTTGTCGCATCC
4461.80e-08TCTGGCGACTCATCCCCAAAAGAACAACACCGGGATCACC
1891.80e-08GAGAACCCCAGACCCCCATCGCTGCAACACCGACGGTCTA
4933.84e-08TGCGAGAGGTGATCCCGCTCGCCGCAAGTCGATGACCGAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000124 100.0 1075 0 0 1 1075 1 1075 0.0 1986
pORI00000011 99.164 1076 4 4 1 1075 1 1072 0.0 1932
pORI00000181 94.915 413 17 3 664 1075 903 494 0.0 643
pORI00000181 100.0 78 0 0 4 81 78 1 2.16e-35 145
pORI00000315 95.161 62 1 1 783 844 1601 1660 6.15e-21 97
pORI00000306 92.647 68 3 1 783 850 280 215 6.15e-21 97
pORI00000240 95.161 62 1 1 783 844 1246 1305 6.15e-21 97
pORI00000343 91.176 68 4 1 783 850 146 81 2.86e-19 92
pORI00000320 93.548 62 2 1 783 844 968 1027 2.86e-19 92
pORI00000312 93.548 62 2 1 783 844 968 1027 2.86e-19 92
pORI00000309 93.548 62 2 1 783 844 897 956 2.86e-19 92
pORI00000238 93.548 62 2 1 783 844 1058 1117 2.86e-19 92
pORI00000112 93.548 62 2 1 783 844 1826 1885 2.86e-19 92
pORI00000060 91.176 68 4 1 783 850 1529 1464 2.86e-19 92
pORI00000022 93.548 62 2 1 783 844 874 933 2.86e-19 92
pORI00000012 93.548 62 1 2 783 844 917 975 1.03e-18 90
pORI00000058 90.769 65 3 2 780 844 851 912 4.79e-17 84