RefSeq NC_002145
DoriC accession number pORI00000011
OriC length 1072 nt
OriC AT content 0.4562
The location of oriC region 1390..912 nt
Browse in NCBI
OriC map
OriC sequences
GCTAGCGGCAGGCGGACAATCAGGGGCTACGTGTTAACGTTCTAGACCATGATTGTCTATCCTGCATTGCTCTTTTGCCGCCTCAAAATCCTTTGCGTGTTTTTGCTCCCCGTTCTCCAGAAAAAACCGAGCCGCCACGGTTCCGGCAGCGCCTTGAGCGCTACCGGAAACCGTCTGGGGAGAACCCCAGACCCCCATCGCTGCAACACCGACGGTCTACGACCACCTACCAACCGCATGGCTGCCTGTTCCGTGCAAATGGGCTTTGCAGGGGGCTGGCGCGGTTCCTGGCGACCTGAAAGCCCCTGGTTAGGGGTATCGGCGCGCTTGACCTCCTGAGAGCCTCTGTAAGCGTTTTTCGCGCCTTCCATGCCCTGGCGGGCATCTAAAACCCGTTTCGTGCGTCTGAGAGCTTTTGAGCGCGTTTGAGGGGCTATCTGGCGACTCATCCCCAAAAGAACAACACCGGGATCACCGACAACATGCGAGAGGTGATCCCGCTCGCCGCAAGTCGATGACCGAGCGTAGCGAGCGAATCGACGAGGAAGCGGAAGAGAACCGGAAGCCACATTGAGCACTTACGCACTGATGCGGGGTGTCGGGGTGAAGCCCTGACCAAGTGGTAATCGTATCGGCGTGCATGCGCGGTTATACGATTACACATCCTGTCCCGATTTCTGAGGCGTTTTAACGGTGAACGGACGGCAAAAACACGATGGAGCTGTTGAACGTGAAAACCACGAAATCTGGCAAAAATCACGGCTGGCGAGGCTTGCATAGGAGTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGTTCAGGGCTTCGCCCGACACCCCCAAAGGGCGTTGCGTTGCACGCAACACCCTTGCCTAGAATAGATCTTTTACGCCGATTTGTAAGTGGTTGTTTTTTTAGTGTGTTTTTTATTTACCTGTCGCATCCAGGATGAAACAACGTTGTCGCATCCTGGATGCGACAACACGCAACAAGGTGTTGCACAGATGTGTCATGATGGCTTAGATTTGAACCAACGTTAGTGCATGGGATTTTCAGAGGGAAAAAATC
GCTAGCGGCAGGCGGACAATCAGGGGCTACGTGTTAACGTTCTAGACCATGATTGTCTATCCTGCATTGCTCTTTTGCCGCCTCAAAATCCTTTGCGTGTTTTTGCTCCCCGTTCTCCAGAAAAAACCGAGCCGCCACGGTTCCGGCAGCGCCTTGAGCGCTACCGGAAACCGTCTGGGGAGAACCCCAGACCCCCATCGCTGCAACACCGACGGTCTACGACCACCTACCAACCGCATGGCTGCCTGTTCCGTGCAAATGGGCTTTGCAGGGGGCTGGCGCGGTTCCTGGCGACCTGAAAGCCCCTGGTTAGGGGTATCGGCGCGCTTGACCTCCTGAGAGCCTCTGTAAGCGTTTTTCGCGCCTTCCATGCCCTGGCGGGCATCTAAAACCCGTTTCGTGCGTCTGAGAGCTTTTGAGCGCGTTTGAGGGGCTATCTGGCGACTCATCCCCAAAAGAACAACACCGGGATCACCGACAACATGCGAGAGGTGATCCCGCTCGCCGCAAGTCGATGACCGAGCGTAGCGAGCGAATCGACGAGGAAGCGGAAGAGAACCGGAAGCCACATTGAGCACTTACGCACTGATGCGGGGTGTCGGGGTGAAGCCCTGACCAAGTGGTAATCGTATCGGCGTGCATGCGCGGTTATACGATTACACATCCTGTCCCGATTTCTGAGGCGTTTTAACGGTGAACGGACGGCAAAAACACGATGGAGCTGTTGAACGTGAAAACCACGAAATCTGGCAAAAATCACGGCTGGCGAGGCTTGCATAGGAGTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGTTCAGGGCTTCGCCCGACACCCCCAAAGGGCGTTGCGTTGCACGCAACACCCTTGCCTAGAATAGATCTTTTACGCCGATTTGTAAGTGGTTGTTTTTTTAGTGTGTTTTTTATTTACCTGTCGCATCCAGGATGAAACAACGTTGTCGCATCCTGGATGCGACAACACGCAACAAGGTGTTGCACAGATGTGTCATGATGGCTTAGATTTGAACCAACGTTAGTGCATGGGATTTTCAGAGGGAAAAAATC
AT-rich region
The information of repeat sequences

Motif ABCTYYTGHGCSBNTTTGTDAGBSKTTBT

StartP-valueSite
8869.58e-13CCTAGAATAGATCTTTTACGCCGATTTGTAAGTGGTTGTTTTTTTAGTG
3311.09e-11GGCGCGCTTGACCTCCTGAGAGCCTCTGTAAGCGTTTTTCGCGCCTTCC
4112.79e-11TGCGTCTGAGAGCTTTTGAGCGCGTTTGAGGGGCTATCTGGCGACTCAT
6614.96e-11ATACGATTACACATCCTGTCCCGATTTCTGAGGCGTTTTAACGGTGAAC
882.74e-10CCGCCTCAAAATCCTTTGCGTGTTTTTGCTCCCCGTTCTCCAGAAAAAA

Motif WCKCATCCHSRAWRVRACAAC

StartP-valueSite
9423.88e-13TATTTACCTGTCGCATCCAGGATGAAACAACGTTGTCGCAT
9671.56e-11AACAACGTTGTCGCATCCTGGATGCGACAACACGCAACAAG
4442.17e-10CTATCTGGCGACTCATCCCCAAAAGAACAACACCGGGATCA

Motif AAAAACMCG

StartP-valueSite
7072.87e-06AACGGACGGCAAAAACACGATGGAGCTGT
7539.10e-06AAATCTGGCAAAAATCACGGCTGGCGAGG
7341.49e-05GTTGAACGTGAAAACCACGAAATCTGGCA
1212.80e-05CGTTCTCCAGAAAAAACCGAGCCGCCACG
3873.13e-05GGCGGGCATCTAAAACCCGTTTCGTGCGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000011 100.0 1072 0 0 1 1072 1 1072 0.0 1980
pORI00000124 99.164 1076 4 4 1 1072 1 1075 0.0 1932
pORI00000181 95.377 411 15 4 665 1072 903 494 0.0 651
pORI00000181 98.734 79 0 1 4 82 78 1 1e-33 139
pORI00000315 95.0 60 2 1 784 842 1601 1660 7.93e-20 94
pORI00000306 95.0 60 2 1 784 842 280 221 7.93e-20 94
pORI00000240 95.0 60 2 1 784 842 1246 1305 7.93e-20 94
pORI00000343 93.333 60 3 1 784 842 146 87 3.69e-18 88
pORI00000320 93.333 60 3 1 784 842 968 1027 3.69e-18 88
pORI00000312 93.333 60 3 1 784 842 968 1027 3.69e-18 88
pORI00000309 93.333 60 3 1 784 842 897 956 3.69e-18 88
pORI00000238 93.333 60 3 1 784 842 1058 1117 3.69e-18 88
pORI00000112 93.333 60 3 1 784 842 1826 1885 3.69e-18 88
pORI00000060 93.333 60 3 1 784 842 1529 1470 3.69e-18 88
pORI00000022 93.333 60 3 1 784 842 874 933 3.69e-18 88
pORI00000012 93.333 60 2 2 784 842 917 975 3.69e-18 88
pORI00000058 90.476 63 4 2 781 842 851 912 1.72e-16 82