RefSeq GCF_000219515.2
Accession number NZ_CP006632.1
DoriC accession number ORI97014376
OriC length 378 nt
OriC AT content 0.566138
The location of oriC region 4167934..4168311 nt
Browse in NCBI
OriC map
OriC sequences
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidaGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioc
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
gidAGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTACCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACAACCTGGAAAGGATCATTAACTGTGAATGATCGGTGATCCTGGACCGTATAAGCTGGGATCAGAATGAGGGGTTATACACAACTCAAAAACTGAACAACGGTTGTTCTTTGGATAACTACCGGTTGATCCAAGCTTCCTGACAGAGTTATCCACAGTAGATCGCACGATCTGTATACmioC
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif CCTGGR

StartP-valueSite
931.43e-04GACCTGGGATCCTGGGTATTAAAAAG
851.43e-04TTGAGAAAGACCTGGGATCCTGGGTA
2403.17e-04GATCGGTGATCCTGGACCGTATAAGC
2043.17e-04AGATCAACAACCTGGAAAGGATCATT
424.19e-04TGGATTGAAGCCCGGGCCGTGGATTC

Motif CTGTGGAT

StartP-valueSite
1671.62e-05TCGCACTACCCTGTGGATAACAAGGATC
482.76e-05GAAGCCCGGGCCGTGGATTCTACTCAAC
3089.87e-05AACGGTTGTTCTTTGGATAACTACCGGT
2229.87e-05GGATCATTAACTGTGAATGATCGGTGAT
3221.88e-04GGATAACTACCGGTTGATCCAAGCTTCC

Motif ARGATC

StartP-valueSite
2112.55e-04CAACCTGGAAAGGATCATTAACTGTG
1792.55e-04GTGGATAACAAGGATCCGGCTTTTAA
1532.55e-04ATCTCTTATTAGGATCGCACTACCCT
1935.64e-04TCCGGCTTTTAAGATCAACAACCTGG
1095.64e-04TATTAAAAAGAAGATCTATTTATTTA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
ORI96000414 99.735 378 1 0 1 378 1 378 0.0 693
ORI93020113 99.735 378 1 0 1 378 1 378 0.0 693
ORI92720080 99.735 378 1 0 1 378 1 378 0.0 693
ORI96000422 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000408 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000405 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000401 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000400 99.471 378 2 0 1 378 378 1 0.0 688
ORI93020099 99.471 378 2 0 1 378 1 378 0.0 688
ORI93020090 99.471 378 2 0 1 378 1 378 0.0 688
ORI94030303 99.471 378 2 0 1 378 1 378 0.0 688
ORI92720076 99.471 378 2 0 1 378 1 378 0.0 688
ORI92330196 99.471 378 2 0 1 378 1 378 0.0 688
ORI96000364 99.471 378 2 0 1 378 378 1 0.0 688
ORI10030070 99.471 378 2 0 1 378 378 1 0.0 688
ORI10020005 99.471 378 2 0 1 378 1 378 0.0 688
ORI10020004 99.471 378 2 0 1 378 1 378 0.0 688
ORI10020002 99.471 378 2 0 1 378 1 378 0.0 688
ORI10020001 99.471 378 2 0 1 378 378 1 0.0 688
ORI96000438 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000437 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000436 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000416 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000411 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000409 99.206 378 3 0 1 378 1 378 0.0 682
ORI96000368 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020102 99.206 378 3 0 1 378 378 1 0.0 682
ORI96000367 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020098 99.206 378 3 0 1 378 1 378 0.0 682
ORI93020096 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020093 99.206 378 3 0 1 378 1 378 0.0 682
ORI94030302 99.206 378 3 0 1 378 1 378 0.0 682
ORI94030301 99.206 378 3 0 1 378 1 378 0.0 682
ORI94030298 99.206 378 3 0 1 378 1 378 0.0 682
ORI92720078 99.206 378 3 0 1 378 1 378 0.0 682
ORI92330207 99.206 378 3 0 1 378 378 1 0.0 682
ORI92320059 99.206 378 3 0 1 378 1 378 0.0 682
ORI92320058 99.206 378 3 0 1 378 378 1 0.0 682
ORI92220053 99.206 378 3 0 1 378 1 378 0.0 682
ORI10030083 99.206 378 3 0 1 378 378 1 0.0 682
ORI93020104 99.206 378 2 1 1 378 1 377 0.0 680
ORI96000417 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000415 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000410 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000407 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000406 98.942 378 4 0 1 378 1 378 0.0 676
ORI96000390 98.942 378 4 0 1 378 1 378 0.0 676
ORI95030447 98.942 378 4 0 1 378 378 1 0.0 676
ORI96000365 98.942 378 4 0 1 378 1 378 0.0 676
ORI92220052 98.942 378 4 0 1 378 1 378 0.0 676
ORI30020033 98.942 378 4 0 1 378 1 378 0.0 676
ORI10030036 98.942 378 4 0 1 378 378 1 0.0 676
ORI10030030 98.942 378 4 0 1 378 1 378 0.0 676
ORI93020103 98.942 378 3 1 1 378 377 1 0.0 675
ORI96000413 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000412 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000404 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000403 98.677 378 5 0 1 378 1 378 0.0 671
ORI96000402 98.677 378 5 0 1 378 1 378 0.0 671
ORI94030299 98.677 378 5 0 1 378 1 378 0.0 671
ORI92720079 98.677 378 5 0 1 378 1 378 0.0 671
ORI50020036 98.677 378 5 0 1 378 1 378 0.0 671
ORI30020034 98.677 378 5 0 1 378 82 459 0.0 671
ORI10020028 98.677 378 5 0 1 378 1 378 0.0 671
ORI10020012 98.677 378 5 0 1 378 1 378 0.0 671
ORI94030300 98.413 378 6 0 1 378 1 378 0.0 665
ORI10030084 98.413 378 6 0 1 378 378 1 0.0 665
ORI93030277 90.263 380 33 4 1 378 378 1 0.0 494
ORI92230170 88.978 372 41 0 1 372 1 372 0.0 460
ORI96000399 87.634 372 46 0 1 372 1 372 0.0 433
ORI92520066 87.634 372 46 0 1 372 1 372 0.0 433
ORI92520065 87.634 372 46 0 1 372 1 372 0.0 433
ORI92520068 87.366 372 47 0 1 372 1 372 0.0 427
ORI95030469 87.097 372 48 0 1 372 1 372 0.0 422
ORI95030444 87.097 372 48 0 1 372 1 372 0.0 422
ORI95020132 87.097 372 48 0 1 372 1 372 0.0 422
ORI95030443 87.097 372 48 0 1 372 1 372 0.0 422
ORI95030442 87.097 372 48 0 1 372 1 372 0.0 422
ORI95020131 87.097 372 48 0 1 372 1 372 0.0 422
ORI95020129 86.807 379 48 2 1 378 378 1 0.0 422
ORI95030441 86.772 378 50 0 1 378 396 19 0.0 422
ORI95030436 87.097 372 48 0 1 372 1 372 0.0 422
ORI92720083 87.097 372 48 0 1 372 1 372 0.0 422
ORI92520073 87.097 372 48 0 1 372 1 372 0.0 422
ORI92520067 87.097 372 48 0 1 372 1 372 0.0 422
ORI92520064 87.097 372 48 0 1 372 1 372 0.0 422
ORI10020021 87.097 372 48 0 1 372 1 372 0.0 422
ORI10020015 86.807 379 48 2 1 378 378 1 0.0 422
ORI10020010 86.807 379 48 2 1 378 378 1 0.0 422
ORI10020009 87.097 372 48 0 1 372 1 372 0.0 422
ORI92520071 86.508 378 51 0 1 378 378 1 0.0 416
ORI92230183 86.828 372 49 0 1 372 1 372 0.0 416
ORI10020023 86.828 372 49 0 1 372 1 372 0.0 416
ORI94030400 86.595 373 48 2 1 372 1 372 0.0 411
ORI92520070 86.559 372 50 0 1 372 1 372 0.0 411
ORI94030323 86.472 377 43 8 7 378 377 4 0.0 407
ORI96000434 86.387 382 38 11 1 375 381 7 0.0 405
ORI95020130 86.544 379 37 11 1 372 1 372 0.0 405
ORI93020089 86.544 379 37 11 1 372 1 372 0.0 405
ORI92020049 86.544 379 37 11 1 372 1 372 0.0 405
ORI96000393 86.28 379 38 11 1 372 1 372 0.0 399
ORI92230179 86.364 374 42 8 1 370 377 9 0.0 399
ORI92520072 85.827 381 42 11 1 375 381 7 0.0 394
ORI94030388 86.413 368 37 13 1 361 1 362 0.0 390
ORI93020111 85.564 381 43 11 1 375 381 7 0.0 388
ORI96000432 84.433 379 47 12 1 372 374 1 0.0 363
ORI95020123 81.746 378 59 10 1 372 374 1 0.0 307
ORI93020120 81.794 379 57 11 1 372 374 1 0.0 307
ORI96000429 81.266 379 59 11 1 372 374 1 0.0 296
ORI95020126 80.952 378 62 10 1 372 374 1 0.0 291
ORI96000423 80.822 292 50 5 42 330 331 43 0.0 224
ORI93020094 76.543 243 46 10 89 326 289 53 4.45e-29 122