RefSeq NC_021079
DoriC accession number pORI00000578
OriC length 1248 nt
OriC AT content 0.6226
The location of oriC region 840..2087 nt
Browse in NCBI
OriC map
OriC sequences
CTTGCCGCCCTCATTCCCTTAACCTGTGTACATTGTCTCTTATAAGTGACACTAGATCAAGAAAAATGTCTCTTTAAAGTGACAAACCTTAGCTTTCTGGAAGGTTCTGTAACGCATTCTGAGCATTTTTTCCGTTTCATTGTACTTAGCCCTAGTCTTAACAGCGTTTAACGCCTCTCAACGCTTTTTAGCAGCCTTGTTGCTGTGATCTGTTGTCATGATCCGGATAGTAGTTAAATCTTGATCAAAATTTCTTCAAGGCAACGTGTGTTTTGTGAATACCCCTTAAAACGCGCTGTATCGCGTTTTAAGCGATTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAAATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACGAGGGACAAATTTATGGTCTTGAAAATTGAGATTCATAAGGCATCAAATATTTTTTTGATGATTTTAAGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTAGCTTGCGGGTAATAATCATCGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTCGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTTTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACA
CTTGCCGCCCTCATTCCCTTAACCTGTGTACATTGTCTCTTATAAGTGACACTAGATCAAGAAAAATGTCTCTTTAAAGTGACAAACCTTAGCTTTCTGGAAGGTTCTGTAACGCATTCTGAGCATTTTTTCCGTTTCATTGTACTTAGCCCTAGTCTTAACAGCGTTTAACGCCTCTCAACGCTTTTTAGCAGCCTTGTTGCTGTGATCTGTTGTCATGATCCGGATAGTAGTTAAATCTTGATCAAAATTTCTTCAAGGCAACGTGTGTTTTGTGAATACCCCTTAAAACGCGCTGTATCGCGTTTTAAGCGATTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAAATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACGAGGGACAAATTTATGGTCTTGAAAATTGAGATTCATAAGGCATCAAATATTTTTTTGATGATTTTAAGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTAGCTTGCGGGTAATAATCATCGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTCGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTTTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACA
AT-rich region
The information of repeat sequences

Motif TAAACATGAGAGCTTCCTCGG

StartP-valueSite
9941.23e-13CTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCAC
9501.23e-13CTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGA
9281.23e-13CTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGA
8841.23e-13GTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGA
9727.73e-13CTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGA

Motif GADCGHVGCRGCNGA

StartP-valueSite
3538.29e-09TGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCA
5003.55e-08GCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGA
4614.63e-08AGGAAATACCGCTCGCCGCAGCCGAACGGCAGGAG
4836.71e-08CGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGG

Motif CGRGGGACARATTTATGG

StartP-valueSite
7168.00e-12TAATAATCATCGGGGGACAGATTTATGGTAAGGAACCA
5834.40e-11TTAAAGTTAACGAGGGACAAATTTATGGTCTTGAAAAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000578 100.0 1248 0 0 1 1248 1 1248 0.0 2305
pORI00000578 95.455 88 4 0 928 1015 884 971 3.26e-34 141
pORI00000578 95.455 88 4 0 884 971 928 1015 3.26e-34 141
pORI00000578 100.0 66 0 0 950 1015 884 949 1.18e-28 122
pORI00000578 100.0 66 0 0 884 949 950 1015 1.18e-28 122
pORI00000999 99.92 1248 1 0 1 1248 1 1248 0.0 2300
pORI00000999 95.455 88 4 0 928 1015 884 971 3.26e-34 141
pORI00000999 95.455 88 4 0 884 971 928 1015 3.26e-34 141
pORI00000999 100.0 66 0 0 950 1015 884 949 1.18e-28 122
pORI00000999 100.0 66 0 0 884 949 950 1015 1.18e-28 122
pORI00001192 98.763 970 10 2 281 1248 76 1045 0.0 1724
pORI00001192 95.455 88 4 0 928 1015 681 768 3.26e-34 141
pORI00001192 95.455 88 4 0 884 971 725 812 3.26e-34 141
pORI00001192 100.0 66 0 0 950 1015 681 746 1.18e-28 122
pORI00001192 100.0 66 0 0 884 949 747 812 1.18e-28 122
pORI00001058 98.763 970 10 2 281 1248 76 1045 0.0 1724
pORI00001058 100.0 88 0 0 884 971 725 812 6.95997e-41 163
pORI00001058 93.182 88 6 0 928 1015 681 768 7.05e-31 130
pORI00001058 100.0 66 0 0 950 1015 681 746 1.18e-28 122
pORI00001058 93.939 66 4 0 884 949 747 812 5.53e-22 100
pORI00001058 95.455 44 2 0 884 927 769 812 4.34e-13 71
pORI00000968 98.763 970 10 2 281 1248 76 1045 0.0 1724
pORI00000968 95.455 88 4 0 928 1015 681 768 3.26e-34 141
pORI00000968 95.455 88 4 0 884 971 725 812 3.26e-34 141
pORI00000968 100.0 66 0 0 950 1015 681 746 1.18e-28 122
pORI00000968 100.0 66 0 0 884 949 747 812 1.18e-28 122
pORI00000723 98.763 970 10 2 281 1248 976 7 0.0 1724
pORI00000723 95.455 88 4 0 884 971 327 240 3.26e-34 141
pORI00000723 95.455 88 4 0 928 1015 371 284 3.26e-34 141
pORI00000723 100.0 66 0 0 884 949 305 240 1.18e-28 122
pORI00000723 100.0 66 0 0 950 1015 371 306 1.18e-28 122
pORI00000722 98.763 970 10 2 281 1248 976 7 0.0 1724
pORI00000722 95.455 88 4 0 884 971 327 240 3.26e-34 141
pORI00000722 95.455 88 4 0 928 1015 371 284 3.26e-34 141
pORI00000722 100.0 66 0 0 884 949 305 240 1.18e-28 122
pORI00000722 100.0 66 0 0 950 1015 371 306 1.18e-28 122
pORI00000604 98.763 970 10 2 281 1248 76 1045 0.0 1724
pORI00000604 95.455 88 4 0 928 1015 681 768 3.26e-34 141
pORI00000604 95.455 88 4 0 884 971 725 812 3.26e-34 141
pORI00000604 100.0 66 0 0 950 1015 681 746 1.18e-28 122
pORI00000604 100.0 66 0 0 884 949 747 812 1.18e-28 122
pORI00001059 98.661 971 10 3 281 1248 76 1046 0.0 1718
pORI00001059 100.0 88 0 0 884 971 726 813 6.95997e-41 163
pORI00001059 93.182 88 6 0 928 1015 682 769 7.05e-31 130
pORI00001059 100.0 66 0 0 950 1015 682 747 1.18e-28 122
pORI00001059 93.939 66 4 0 884 949 748 813 5.53e-22 100
pORI00001059 95.455 44 2 0 884 927 770 813 4.34e-13 71
pORI00000998 98.454 970 13 2 281 1248 76 1045 0.0 1707
pORI00000998 97.727 88 2 0 928 1015 681 768 1.51e-37 152
pORI00000998 93.182 88 6 0 884 971 725 812 7.05e-31 130
pORI00000998 100.0 66 0 0 884 949 747 812 1.18e-28 122
pORI00000998 96.97 66 2 0 950 1015 681 746 2.56e-25 111
pORI00000548 96.907 970 28 2 281 1248 970 1 0.0 1624
pORI00000548 100.0 88 0 0 884 971 321 234 6.95997e-41 163
pORI00000548 93.939 66 4 0 884 949 299 234 5.53e-22 100
pORI00000548 92.424 66 5 0 950 1015 365 300 2.57e-20 95
pORI00000548 97.727 44 1 0 972 1015 365 322 9.32e-15 77
pORI00000548 95.455 44 2 0 884 927 277 234 4.34e-13 71
pORI00001062 95.954 519 16 5 1 517 1105 590 0.0 837
pORI00001062 98.246 456 7 1 794 1248 462 7 0.0 797
pORI00001062 95.455 88 4 0 884 971 327 240 3.26e-34 141
pORI00001062 95.455 88 4 0 928 1015 371 284 3.26e-34 141
pORI00001062 100.0 66 0 0 884 949 305 240 1.18e-28 122
pORI00001062 100.0 66 0 0 950 1015 371 306 1.18e-28 122
pORI00000834 90.338 414 35 5 106 517 1226 816 0.0 538
pORI00000834 97.674 86 2 0 1 86 1385 1300 1.95e-36 148
pORI00000697 88.938 226 18 6 794 1016 475 254 0.0 272
pORI00000697 94.595 111 6 0 905 1015 387 277 1.16308e-43 172
pORI00000697 93.86 114 6 1 884 996 364 251 4.16186e-43 171
pORI00000697 96.629 89 3 0 927 1015 387 299 1.95e-36 148
pORI00000697 95.652 92 3 1 884 974 342 251 7.01e-36 147
pORI00000697 98.507 67 1 0 949 1015 387 321 1.53e-27 119
pORI00000697 97.143 70 1 1 884 952 320 251 5.49e-27 117
pORI00000914 91.262 103 8 1 284 385 108 210 1.17e-33 139
pORI00000595 91.262 103 8 1 284 385 108 210 1.17e-33 139
pORI00001084 98.592 71 1 0 457 527 680 610 9.13e-30 126
pORI00000043 100.0 57 0 0 459 515 773 829 1.19e-23 106
pORI00000056 96.491 57 2 0 459 515 633 689 2.57e-20 95