RefSeq NZ_CP011290
DoriC accession number pORI00000722
OriC length 1414 nt
OriC AT content 0.5771
The location of oriC region 6440..7853 nt
Browse in NCBI
OriC map
OriC sequences
TCTCATTGTTCCAACACTCTTGATAATCAGACTTTAACACCAGAAACATGATATTACAACACAATCAATATCATGTTTAACCGAGTATCTTCTCATGTTTCATATCTGTGATTTATCTCACAAAGGTAATCCATGCTCAAAATCCACACTGGATTCAAGGCAGATTAACAACAGATTCAAAATAGATTCACCAGAAAGAACAACGAATTAGTATTCTTATGACACATTTTGTGGATATCACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAGACAAAAAACACGCTTAAAATCAATAAATTAGAGCTACTCTAAGTTTTTAAGTTTTTAAGAAAAACAAGAAAAGATAAGGCTTTTAATGCGTGCGAATATTCAGGAACTGTGGATAACTCAACAAAACCAGCAACGATGATGGTTCCTTACCATAAATCTGTCCCCCGATGATTATTACCCGCAAGCTAAAACAAACATCATCAATCATTAAAACTCATAACTTTCAATAACATAAAATCATCAAAAAAATATTTGATGCCTTATGTATCTCAATTTTCAAGACCATAAATTTGTCCCTAGTTAACTTTAACTTATTGAAATAAATATAATATTCGTGCGTACTGATCCTAATGTCACATCGCAAAAATTCCGCTTCCTCGCTCACTCAGTCGCTACGCTCCTGCCGTTCGGCTGCGGCGAGCGGTATCTCCTTTCTCAAAACCAGAGAGATTCAGATCATATGATCCGTTATTTGATCCTTTTTGGATCTTCCACTAAGAAGCCCTGAATCGCGCTCTGCCGCTTCGTTCGATACAACCATGAGGAAAACCATGCGAAATGAAAAAAATCGCTTAAAATGCGATTCAGAGCGTTTTAGGGAGGTTCTGTTAGTTCTCCTGCATTGCGCCCGTAGTTCGCTAACGCTCACACGCGCAGTACAGCGCCCCGCCATGCTGCAATGCACCAGGGCGGGGTAAACTCGCTTGCGCTCGCGCTAACTGCGGCATTCTGCGGCGCAAATCAGCATAATCATGGCCTGCTGGTCAGTTGGGCTTTGCAGGGTGAAGGGATGGCCTGTGCACCCTGGTACGTTCGTCAGCGGCTGCGCCGCGCTTCGGGGCGATGTGGCTCCTGTGCTGCCCTGGTATTTTCGTTCGCCCCTTCCATCCGCTTACGCGGATTAAAAAACGTGATAACAATCACTTATCGAGTAAAAAAACGGGAGAAAACTTGCAAATACGACTTAAAGGTCGTATTATTGTTTCATCGAAAGGGGAATGGCCCCTCTCACAATAGCCCAGCAGGGCAGGAGATTAAAAAA
TCTCATTGTTCCAACACTCTTGATAATCAGACTTTAACACCAGAAACATGATATTACAACACAATCAATATCATGTTTAACCGAGTATCTTCTCATGTTTCATATCTGTGATTTATCTCACAAAGGTAATCCATGCTCAAAATCCACACTGGATTCAAGGCAGATTAACAACAGATTCAAAATAGATTCACCAGAAAGAACAACGAATTAGTATTCTTATGACACATTTTGTGGATATCACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAGACAAAAAACACGCTTAAAATCAATAAATTAGAGCTACTCTAAGTTTTTAAGTTTTTAAGAAAAACAAGAAAAGATAAGGCTTTTAATGCGTGCGAATATTCAGGAACTGTGGATAACTCAACAAAACCAGCAACGATGATGGTTCCTTACCATAAATCTGTCCCCCGATGATTATTACCCGCAAGCTAAAACAAACATCATCAATCATTAAAACTCATAACTTTCAATAACATAAAATCATCAAAAAAATATTTGATGCCTTATGTATCTCAATTTTCAAGACCATAAATTTGTCCCTAGTTAACTTTAACTTATTGAAATAAATATAATATTCGTGCGTACTGATCCTAATGTCACATCGCAAAAATTCCGCTTCCTCGCTCACTCAGTCGCTACGCTCCTGCCGTTCGGCTGCGGCGAGCGGTATCTCCTTTCTCAAAACCAGAGAGATTCAGATCATATGATCCGTTATTTGATCCTTTTTGGATCTTCCACTAAGAAGCCCTGAATCGCGCTCTGCCGCTTCGTTCGATACAACCATGAGGAAAACCATGCGAAATGAAAAAAATCGCTTAAAATGCGATTCAGAGCGTTTTAGGGAGGTTCTGTTAGTTCTCCTGCATTGCGCCCGTAGTTCGCTAACGCTCACACGCGCAGTACAGCGCCCCGCCATGCTGCAATGCACCAGGGCGGGGTAAACTCGCTTGCGCTCGCGCTAACTGCGGCATTCTGCGGCGCAAATCAGCATAATCATGGCCTGCTGGTCAGTTGGGCTTTGCAGGGTGAAGGGATGGCCTGTGCACCCTGGTACGTTCGTCAGCGGCTGCGCCGCGCTTCGGGGCGATGTGGCTCCTGTGCTGCCCTGGTATTTTCGTTCGCCCCTTCCATCCGCTTACGCGGATTAAAAAACGTGATAACAATCACTTATCGAGTAAAAAAACGGGAGAAAACTTGCAAATACGACTTAAAGGTCGTATTATTGTTTCATCGAAAGGGGAATGGCCCCTCTCACAATAGCCCAGCAGGGCAGGAGATTAAAAAA
AT-rich region
The information of repeat sequences

Motif ACCGAGGAAGCTCTCATGTTT

StartP-valueSite
3501.83e-13ATCATGTTTAACCGAGGAAGCTCTCATGTTTAGACAAAAAA
3061.83e-13CTCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAA
2841.83e-13ATCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAA
2401.83e-13TGTGGATATCACCGAGGAAGCTCTCATGTTTAACCGAGGAA
3289.27e-13CTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAA

Motif YCCTGSHWYGYTCVNBNGCBNCKBHVMYGCGCTTVSGCKS

StartP-valueSite
11751.43e-16GGCCTGTGCACCCTGGTACGTTCGTCAGCGGCTGCGCCGCGCTTCGGGGCGATGTGGCTC
12331.40e-15TCCTGTGCTGCCCTGGTATTTTCGTTCGCCCCTTCCATCCGCTTACGCGGATTAAAAAAC
10452.28e-14CGCCCCGCCATGCTGCAATGCACCAGGGCGGGGTAAACTCGCTTGCGCTCGCGCTAACTG
7471.67e-13AAATTCCGCTTCCTCGCTCACTCAGTCGCTACGCTCCTGCCGTTCGGCTGCGGCGAGCGG
9883.02e-13CTGTTAGTTCTCCTGCATTGCGCCCGTAGTTCGCTAACGCTCACACGCGCAGTACAGCGC

Motif TMTCATKTTT

StartP-valueSite
911.27e-06CCGAGTATCTTCTCATGTTTCATATCTGTG
2732.94e-06CCGAGGAAGTTATCATGTTTAACCGAGGAA
692.94e-06ACACAATCAATATCATGTTTAACCGAGTAT
11.19e-05.TCTCATTGTTCCAACACTCT
6401.57e-05GCCTTATGTATCTCAATTTTCAAGACCATA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000723 100.0 1414 0 0 1 1414 1 1414 0.0 2612
pORI00000723 95.455 88 4 0 284 371 240 327 3.7e-34 141
pORI00000723 95.455 88 4 0 240 327 284 371 3.7e-34 141
pORI00000723 100.0 66 0 0 306 371 240 305 1.34e-28 122
pORI00000723 100.0 66 0 0 240 305 306 371 1.34e-28 122
pORI00000722 100.0 1414 0 0 1 1414 1 1414 0.0 2612
pORI00000722 95.455 88 4 0 284 371 240 327 3.7e-34 141
pORI00000722 95.455 88 4 0 240 327 284 371 3.7e-34 141
pORI00000722 100.0 66 0 0 306 371 240 305 1.34e-28 122
pORI00000722 100.0 66 0 0 240 305 306 371 1.34e-28 122
pORI00001192 100.0 1051 0 0 1 1051 1051 1 0.0 1941
pORI00001192 95.455 88 4 0 240 327 768 681 3.7e-34 141
pORI00001192 95.455 88 4 0 284 371 812 725 3.7e-34 141
pORI00001192 100.0 66 0 0 240 305 746 681 1.34e-28 122
pORI00001192 100.0 66 0 0 306 371 812 747 1.34e-28 122
pORI00000968 100.0 1051 0 0 1 1051 1051 1 0.0 1941
pORI00000968 95.455 88 4 0 240 327 768 681 3.7e-34 141
pORI00000968 95.455 88 4 0 284 371 812 725 3.7e-34 141
pORI00000968 100.0 66 0 0 240 305 746 681 1.34e-28 122
pORI00000968 100.0 66 0 0 306 371 812 747 1.34e-28 122
pORI00000604 100.0 1045 0 0 7 1051 1045 1 0.0 1930
pORI00000604 95.455 88 4 0 240 327 768 681 3.7e-34 141
pORI00000604 95.455 88 4 0 284 371 812 725 3.7e-34 141
pORI00000604 100.0 66 0 0 240 305 746 681 1.34e-28 122
pORI00000604 100.0 66 0 0 306 371 812 747 1.34e-28 122
pORI00000998 99.715 1051 3 0 1 1051 1051 1 0.0 1925
pORI00000998 97.727 88 2 0 240 327 768 681 1.71e-37 152
pORI00000998 93.182 88 6 0 284 371 812 725 8.01e-31 130
pORI00000998 100.0 66 0 0 306 371 812 747 1.34e-28 122
pORI00000998 96.97 66 2 0 240 305 746 681 2.9e-25 111
pORI00001058 99.239 1051 8 0 1 1051 1051 1 0.0 1897
pORI00001058 100.0 88 0 0 284 371 812 725 7.89996e-41 163
pORI00001058 93.182 88 6 0 240 327 768 681 8.01e-31 130
pORI00001058 100.0 66 0 0 240 305 746 681 1.34e-28 122
pORI00001058 93.939 66 4 0 306 371 812 747 6.28e-22 100
pORI00001058 95.455 44 2 0 328 371 812 769 4.92e-13 71
pORI00001059 99.144 1052 8 1 1 1051 1052 1 0.0 1892
pORI00001059 100.0 88 0 0 284 371 813 726 7.89996e-41 163
pORI00001059 93.182 88 6 0 240 327 769 682 8.01e-31 130
pORI00001059 100.0 66 0 0 240 305 747 682 1.34e-28 122
pORI00001059 93.939 66 4 0 306 371 813 748 6.28e-22 100
pORI00001059 95.455 44 2 0 328 371 813 770 4.92e-13 71
pORI00000578 98.763 970 10 2 7 976 1248 281 0.0 1724
pORI00000578 95.455 88 4 0 240 327 971 884 3.7e-34 141
pORI00000578 95.455 88 4 0 284 371 1015 928 3.7e-34 141
pORI00000578 100.0 66 0 0 240 305 949 884 1.34e-28 122
pORI00000578 100.0 66 0 0 306 371 1015 950 1.34e-28 122
pORI00000999 98.66 970 11 2 7 976 1248 281 0.0 1718
pORI00000999 95.455 88 4 0 240 327 971 884 3.7e-34 141
pORI00000999 95.455 88 4 0 284 371 1015 928 3.7e-34 141
pORI00000999 100.0 66 0 0 240 305 949 884 1.34e-28 122
pORI00000999 100.0 66 0 0 306 371 1015 950 1.34e-28 122
pORI00000548 97.741 974 22 0 7 980 1 974 0.0 1677
pORI00000548 100.0 88 0 0 284 371 234 321 7.89996e-41 163
pORI00000548 93.939 66 4 0 306 371 234 299 6.28e-22 100
pORI00000548 92.424 66 5 0 240 305 300 365 2.92e-20 95
pORI00000548 97.727 44 1 0 240 283 322 365 1.06e-14 77
pORI00000548 95.455 44 2 0 328 371 234 277 4.92e-13 71
pORI00001062 98.268 462 7 1 1 461 1 462 0.0 808
pORI00001062 91.667 240 15 5 738 976 590 825 0.0 327
pORI00001062 95.455 88 4 0 284 371 240 327 3.7e-34 141
pORI00001062 95.455 88 4 0 240 327 284 371 3.7e-34 141
pORI00001062 100.0 66 0 0 306 371 240 305 1.34e-28 122
pORI00001062 100.0 66 0 0 240 305 306 371 1.34e-28 122
pORI00000697 88.496 226 19 6 239 461 254 475 0.0 267
pORI00000697 94.595 111 6 0 240 350 277 387 1.30321e-43 172
pORI00000697 93.86 114 6 1 259 371 251 364 4.72238e-43 171
pORI00000697 96.629 89 3 0 240 328 299 387 2.21e-36 148
pORI00000697 95.652 92 3 1 281 371 251 342 7.95e-36 147
pORI00000697 98.507 67 1 0 240 306 321 387 1.73e-27 119
pORI00000697 97.143 70 1 1 303 371 251 320 6.24e-27 117
pORI00000914 90.291 103 10 0 870 972 210 108 1.72e-32 135
pORI00000595 90.291 103 10 0 870 972 210 108 1.72e-32 135
pORI00001084 98.592 71 1 0 728 798 610 680 1.04e-29 126
pORI00000043 100.0 57 0 0 740 796 829 773 1.35e-23 106
pORI00000056 96.491 57 2 0 740 796 689 633 2.92e-20 95