RefSeq NZ_CP024670
DoriC accession number pORI00001058
OriC length 1051 nt
OriC AT content 0.6118
The location of oriC region 12475..13525 nt
Browse in NCBI
OriC map
OriC sequences
TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTACGGGCGCAATGCAGGAGAACTAACAGAACCTCCCTAAAACGCTCTGAATCGCATTTTAAGCGATTTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACGAGGGACAAATTTATGGTCTTGAAAATTGAGATTCATAAGGCATCAAATATTTTTTTGATGATTTTAAGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTAGCTTGCGGGTAATAATCATCGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTCGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTGTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACAATGAGA
TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTACGGGCGCAATGCAGGAGAACTAACAGAACCTCCCTAAAACGCTCTGAATCGCATTTTAAGCGATTTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACGAGGGACAAATTTATGGTCTTGAAAATTGAGATTCATAAGGCATCAAATATTTTTTTGATGATTTTAAGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTAGCTTGCGGGTAATAATCATCGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTCGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTGTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACAATGAGA
AT-rich region
The information of repeat sequences

Motif AAACATGAGAGCTTCCTCGGTTAAACATGATADCTTCCTCG

StartP-valueSite
7261.46e-25TTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATG
6821.46e-25TTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATG
7701.23e-24TTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCA
9522.73e-19CACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATC

Motif GMGCGANGCRGCNGA

StartP-valueSite
1501.93e-08TGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCA
2586.26e-08AGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAG
2971.27e-07GCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGA
2803.67e-07CGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGG
523.97e-07CGAACTACGGGCGCAATGCAGGAGAACTAACAGAA

Motif AATMTGHTYTGAATC

StartP-valueSite
8861.12e-08ATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGAT
844.41e-08GAACCTCCCTAAAACGCTCTGAATCGCATTTTAAG
2178.58e-08AATAACGGATCATATGATCTGAATCTCTCTGGTTT
8642.47e-07CTTTCTGGTGAATCTATTTTGAATCTGTTGTTAAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00001058 100.0 1051 0 0 1 1051 1 1051 0.0 1941
pORI00001058 97.727 88 2 0 725 812 681 768 1.26e-37 152
pORI00001058 97.727 88 2 0 681 768 725 812 1.26e-37 152
pORI00001058 93.939 66 4 0 747 812 681 746 4.64e-22 100
pORI00001058 93.939 66 4 0 681 746 747 812 4.64e-22 100
pORI00001058 95.455 44 2 0 769 812 681 724 3.64e-13 71
pORI00001058 95.455 44 2 0 681 724 769 812 3.64e-13 71
pORI00001059 99.905 1052 0 1 1 1051 1 1052 0.0 1936
pORI00001059 97.727 88 2 0 725 812 682 769 1.26e-37 152
pORI00001059 97.727 88 2 0 681 768 726 813 1.26e-37 152
pORI00001059 93.939 66 4 0 747 812 682 747 4.64e-22 100
pORI00001059 93.939 66 4 0 681 746 748 813 4.64e-22 100
pORI00001059 95.455 44 2 0 769 812 682 725 3.64e-13 71
pORI00001059 95.455 44 2 0 681 724 770 813 3.64e-13 71
pORI00001192 99.239 1051 8 0 1 1051 1 1051 0.0 1897
pORI00001192 100.0 88 0 0 725 812 681 768 5.84005e-41 163
pORI00001192 93.182 88 6 0 681 768 725 812 5.92e-31 130
pORI00001192 100.0 66 0 0 681 746 747 812 9.91e-29 122
pORI00001192 93.939 66 4 0 747 812 681 746 4.64e-22 100
pORI00001192 95.455 44 2 0 769 812 681 724 3.64e-13 71
pORI00000968 99.239 1051 8 0 1 1051 1 1051 0.0 1897
pORI00000968 100.0 88 0 0 725 812 681 768 5.84005e-41 163
pORI00000968 93.182 88 6 0 681 768 725 812 5.92e-31 130
pORI00000968 100.0 66 0 0 681 746 747 812 9.91e-29 122
pORI00000968 93.939 66 4 0 747 812 681 746 4.64e-22 100
pORI00000968 95.455 44 2 0 769 812 681 724 3.64e-13 71
pORI00000723 99.239 1051 8 0 1 1051 1051 1 0.0 1897
pORI00000723 100.0 88 0 0 725 812 371 284 5.84005e-41 163
pORI00000723 93.182 88 6 0 681 768 327 240 5.92e-31 130
pORI00000723 100.0 66 0 0 681 746 305 240 9.91e-29 122
pORI00000723 93.939 66 4 0 747 812 371 306 4.64e-22 100
pORI00000723 95.455 44 2 0 769 812 371 328 3.64e-13 71
pORI00000722 99.239 1051 8 0 1 1051 1051 1 0.0 1897
pORI00000722 100.0 88 0 0 725 812 371 284 5.84005e-41 163
pORI00000722 93.182 88 6 0 681 768 327 240 5.92e-31 130
pORI00000722 100.0 66 0 0 681 746 305 240 9.91e-29 122
pORI00000722 93.939 66 4 0 747 812 371 306 4.64e-22 100
pORI00000722 95.455 44 2 0 769 812 371 328 3.64e-13 71
pORI00000604 99.234 1045 8 0 1 1045 1 1045 0.0 1886
pORI00000604 100.0 88 0 0 725 812 681 768 5.84005e-41 163
pORI00000604 93.182 88 6 0 681 768 725 812 5.92e-31 130
pORI00000604 100.0 66 0 0 681 746 747 812 9.91e-29 122
pORI00000604 93.939 66 4 0 747 812 681 746 4.64e-22 100
pORI00000604 95.455 44 2 0 769 812 681 724 3.64e-13 71
pORI00000998 98.953 1051 11 0 1 1051 1 1051 0.0 1881
pORI00000998 97.727 88 2 0 725 812 681 768 1.26e-37 152
pORI00000998 100.0 66 0 0 681 746 747 812 9.91e-29 122
pORI00000998 95.455 44 2 0 769 812 681 724 3.64e-13 71
pORI00000578 98.763 970 10 2 76 1045 281 1248 0.0 1724
pORI00000578 100.0 88 0 0 725 812 884 971 5.84005e-41 163
pORI00000578 93.182 88 6 0 681 768 928 1015 5.92e-31 130
pORI00000578 100.0 66 0 0 681 746 950 1015 9.91e-29 122
pORI00000578 93.939 66 4 0 747 812 884 949 4.64e-22 100
pORI00000578 95.455 44 2 0 769 812 884 927 3.64e-13 71
pORI00000999 98.66 970 11 2 76 1045 281 1248 0.0 1718
pORI00000999 100.0 88 0 0 725 812 884 971 5.84005e-41 163
pORI00000999 93.182 88 6 0 681 768 928 1015 5.92e-31 130
pORI00000999 100.0 66 0 0 681 746 950 1015 9.91e-29 122
pORI00000999 93.939 66 4 0 747 812 884 949 4.64e-22 100
pORI00000999 95.455 44 2 0 769 812 884 927 3.64e-13 71
pORI00000548 98.152 974 18 0 72 1045 974 1 0.0 1700
pORI00000548 97.727 88 2 0 681 768 321 234 1.26e-37 152
pORI00000548 92.045 88 7 0 725 812 365 278 2.76e-29 124
pORI00000548 98.485 66 1 0 747 812 365 300 4.61e-27 117
pORI00000548 93.939 66 4 0 681 746 299 234 4.64e-22 100
pORI00000548 95.455 44 2 0 681 724 277 234 3.64e-13 71
pORI00001062 97.403 462 11 1 591 1051 462 1 0.0 785
pORI00001062 91.667 240 15 5 76 314 825 590 0.0 327
pORI00001062 100.0 88 0 0 725 812 371 284 5.84005e-41 163
pORI00001062 93.182 88 6 0 681 768 327 240 5.92e-31 130
pORI00001062 100.0 66 0 0 681 746 305 240 9.91e-29 122
pORI00001062 93.939 66 4 0 747 812 371 306 4.64e-22 100
pORI00001062 95.455 44 2 0 769 812 371 328 3.64e-13 71
pORI00000697 87.611 226 21 6 591 813 475 254 0.0 255
pORI00000697 95.614 114 4 1 681 793 364 251 0.0 182
pORI00000697 94.595 111 6 0 702 812 387 277 9.66896e-44 172
pORI00000697 98.876 89 1 0 724 812 387 299 7.55e-40 159
pORI00000697 93.478 92 5 1 681 771 342 251 1.27e-32 135
pORI00000697 97.143 70 1 1 681 749 320 251 4.61e-27 117
pORI00000697 95.522 67 3 0 746 812 387 321 2.77e-24 108
pORI00000697 97.778 45 1 0 768 812 387 343 2.18e-15 79
pORI00000914 90.291 103 10 0 80 182 108 210 1.27e-32 135
pORI00000595 90.291 103 10 0 80 182 108 210 1.27e-32 135
pORI00001084 98.592 71 1 0 254 324 680 610 7.66e-30 126
pORI00000043 100.0 57 0 0 256 312 773 829 9.98e-24 106
pORI00000056 96.491 57 2 0 256 312 633 689 2.16e-20 95