RefSeq NC_021841
DoriC accession number pORI00000595
OriC length 1365 nt
OriC AT content 0.6059
The location of oriC region 11113..12477 nt
Browse in NCBI
OriC map
OriC sequences
AAGCCCTCCGCTTGTCTCATTGGCATAATAGCATCTTTAAAAGCACTCTTAAAAGTGCTTATTAAAAAAACATCAGAACAGGTGAGATATGGCTCTTTCCGACATCGCCTTAAAACGCTCTGTAACGCGTTCTAAGTGATTTTTTTTATTTTGCATGGTTTCCCTCATGGTTGTACCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTCTGTGTCATTTTGGGGAGGGGGCATTACTGGATCTGTTGATTTATGTATCGTTGAAATGATGTGGTCACATAAATCAATTGGCAAAATAACATATCATGTTGATATTAAAGGTATTTTATTGAAACATGAGAAGATCCTCGGTTAGCAAAATGAGGATCATAATTAAAAGAACTCTTTCATAGTATTCAATAAAATCAGTTAGTTATATTAAACCGCCCTCGGAATGAAATATTCAGGTTGTGACTAAACATGAGAACTTTCTCGGTCTTCACAGGATCAGATTCTGATGAACAGAAAGCCTCTGTAAGCGTTTTTCGCGCCTCTCATGCCTGAAGGGCATTTAAACCCCGTTTCGTGCGTCTGAGCGTGTTTTAGAGGCTATCAAGCGACTCATCACCGAAGGAACAACAACAGAATTACCAGCGATATGTGAGAAATGACTCCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTTAGTGAGCGAGGAAGCGGAATGTCTTCGATGCAGCATATGAATCCGTACGCTCTGGTCTGACCTCATCTTGTGATTTTGCTGATTTCAACTCAAAAAATTCACAATGCGCTCTATTCTTTTTTTCTAATTTCTTTTTTCTAAAAGATAGATCACTCCTATGTTACATATAATATTTCCTTTTTCAGGGCCGTTTTTTCTTTTGTTTTTCAATTAATTGTAATGCTAACTAGGGACAGATTTATGGTTAAAAGGGGACAGATTTATGGTTATTTGCGTTTTTATCAGGGGACAGATTTATGGTTAAAAGGGGACAGATTTATGGTCAACTAGGGACAGATTTAGTGTGGATAACTTTTTTATCCACAGGCTGTGGATAACTTTTTTAGATTCAACTCGGATTCGTTATGGATTCTCTATGAATCTGAATTGGATTAGTGACTTAGATCACATTTAAGATGTTTGGCTCGATGGGTTTTTGATGATGCATTCCCTTCTGGTTTGCTGTATTGACTGCCTCTGACTGAGGGTGAAAATGCGCCGTTCAGCCAGGTTTGACTCTTCAAACAGGGGACAGATTTATGGTTTATTAGTTATGTGGGGACAAAAAAAAATTGCGTCCCTAGTTTGGGTGTGAGAAACTTCTTTTGATTTTTAACTCACAGGAAGGGGATCTGT
AAGCCCTCCGCTTGTCTCATTGGCATAATAGCATCTTTAAAAGCACTCTTAAAAGTGCTTATTAAAAAAACATCAGAACAGGTGAGATATGGCTCTTTCCGACATCGCCTTAAAACGCTCTGTAACGCGTTCTAAGTGATTTTTTTTATTTTGCATGGTTTCCCTCATGGTTGTACCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTCTGTGTCATTTTGGGGAGGGGGCATTACTGGATCTGTTGATTTATGTATCGTTGAAATGATGTGGTCACATAAATCAATTGGCAAAATAACATATCATGTTGATATTAAAGGTATTTTATTGAAACATGAGAAGATCCTCGGTTAGCAAAATGAGGATCATAATTAAAAGAACTCTTTCATAGTATTCAATAAAATCAGTTAGTTATATTAAACCGCCCTCGGAATGAAATATTCAGGTTGTGACTAAACATGAGAACTTTCTCGGTCTTCACAGGATCAGATTCTGATGAACAGAAAGCCTCTGTAAGCGTTTTTCGCGCCTCTCATGCCTGAAGGGCATTTAAACCCCGTTTCGTGCGTCTGAGCGTGTTTTAGAGGCTATCAAGCGACTCATCACCGAAGGAACAACAACAGAATTACCAGCGATATGTGAGAAATGACTCCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTTAGTGAGCGAGGAAGCGGAATGTCTTCGATGCAGCATATGAATCCGTACGCTCTGGTCTGACCTCATCTTGTGATTTTGCTGATTTCAACTCAAAAAATTCACAATGCGCTCTATTCTTTTTTTCTAATTTCTTTTTTCTAAAAGATAGATCACTCCTATGTTACATATAATATTTCCTTTTTCAGGGCCGTTTTTTCTTTTGTTTTTCAATTAATTGTAATGCTAACTAGGGACAGATTTATGGTTAAAAGGGGACAGATTTATGGTTATTTGCGTTTTTATCAGGGGACAGATTTATGGTTAAAAGGGGACAGATTTATGGTCAACTAGGGACAGATTTAGTGTGGATAACTTTTTTATCCACAGGCTGTGGATAACTTTTTTAGATTCAACTCGGATTCGTTATGGATTCTCTATGAATCTGAATTGGATTAGTGACTTAGATCACATTTAAGATGTTTGGCTCGATGGGTTTTTGATGATGCATTCCCTTCTGGTTTGCTGTATTGACTGCCTCTGACTGAGGGTGAAAATGCGCCGTTCAGCCAGGTTTGACTCTTCAAACAGGGGACAGATTTATGGTTTATTAGTTATGTGGGGACAAAAAAAAATTGCGTCCCTAGTTTGGGTGTGAGAAACTTCTTTTGATTTTTAACTCACAGGAAGGGGATCTGT
AT-rich region
The information of repeat sequences

Motif AAMAGGGGACAGATTTATGGT

StartP-valueSite
12533.39e-13TGACTCTTCAAACAGGGGACAGATTTATGGTTTATTAGTTA
9938.67e-13ATTTATGGTTAAAAGGGGACAGATTTATGGTCAACTAGGGA
9378.67e-13ATTTATGGTTAAAAGGGGACAGATTTATGGTTATTTGCGTT
9711.69e-12TTGCGTTTTTATCAGGGGACAGATTTATGGTTAAAAGGGGA
9155.59e-12TTGTAATGCTAACTAGGGACAGATTTATGGTTAAAAGGGGA

Motif MAACATSAGAA

StartP-valueSite
4575.29e-07GGTTGTGACTAAACATGAGAACTTTCTCGGT
3335.29e-07TATTTTATTGAAACATGAGAAGATCCTCGGT
689.56e-07CTTATTAAAAAAACATCAGAACAGGTGAGAT
6172.50e-06ACCGAAGGAACAACAACAGAATTACCAGCGA
3575.28e-06CCTCGGTTAGCAAAATGAGGATCATAATTAA

Motif SHGWHATGRCTSYNYCBGACDNAGBSKNAVAACGCDVYGTAVVGC

StartP-valueSite
841.81e-18CAGAACAGGTGAGATATGGCTCTTTCCGACATCGCCTTAAAACGCTCTGTAACGCGTTCTAAGTG
6436.71e-17AGCGATATGTGAGAAATGACTCCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTTAGTGAGC
11921.48e-16TTCTGGTTTGCTGTATTGACTGCCTCTGACTGAGGGTGAAAATGCGCCGTTCAGCCAGGTTTGAC
1624.59e-16TGCATGGTTTCCCTCATGGTTGTACCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTCTGTGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000595 100.0 1365 0 0 1 1365 1 1365 0.0 2521
pORI00000595 100.0 38 0 0 976 1013 920 957 4.75e-13 71
pORI00000595 100.0 38 0 0 920 957 976 1013 4.75e-13 71
pORI00000914 99.56 1365 6 0 1 1365 1 1365 0.0 2488
pORI00000914 100.0 38 0 0 976 1013 920 957 4.75e-13 71
pORI00000914 100.0 38 0 0 920 957 976 1013 4.75e-13 71
pORI00000478 100.0 1009 0 0 357 1365 1 1009 0.0 1864
pORI00000478 100.0 38 0 0 976 1013 564 601 4.75e-13 71
pORI00000478 100.0 38 0 0 920 957 620 657 4.75e-13 71
pORI00000072 95.27 148 3 4 1 145 1061 915 0.0 231
pORI00000072 96.721 61 2 0 650 710 591 531 1.68e-22 102
pORI00000031 95.27 148 3 4 1 145 1 147 0.0 231
pORI00000031 92.958 71 3 1 642 710 461 531 1.68e-22 102
pORI00000702 93.878 147 5 4 1 144 1232 1087 0.0 219
pORI00000702 96.667 60 2 0 650 709 763 704 6.06e-22 100
pORI00000990 94.406 143 4 3 6 145 148 289 0.0 217
pORI00000990 92.857 70 3 1 642 709 605 674 6.06e-22 100
pORI00000421 93.243 148 6 3 1 145 1 147 0.0 215
pORI00000421 92.857 70 3 1 642 709 462 531 6.06e-22 100
pORI00000999 91.262 103 8 1 108 210 284 385 1.28e-33 139
pORI00000578 91.262 103 8 1 108 210 284 385 1.28e-33 139
pORI00001192 90.291 103 10 0 108 210 80 182 1.66e-32 135
pORI00001059 90.291 103 10 0 108 210 80 182 1.66e-32 135
pORI00001058 90.291 103 10 0 108 210 80 182 1.66e-32 135
pORI00000998 90.291 103 10 0 108 210 80 182 1.66e-32 135
pORI00000968 90.291 103 10 0 108 210 80 182 1.66e-32 135
pORI00000723 91.0 100 9 0 111 210 969 870 1.66e-32 135
pORI00000722 91.0 100 9 0 111 210 969 870 1.66e-32 135
pORI00000604 90.291 103 10 0 108 210 80 182 1.66e-32 135
pORI00000548 91.0 100 9 0 111 210 963 864 1.66e-32 135
pORI00001164 96.721 61 2 0 650 710 877 817 1.68e-22 102
pORI00001144 92.958 71 3 1 642 710 238 308 1.68e-22 102
pORI00001062 96.721 61 2 0 650 710 651 591 1.68e-22 102
pORI00001057 96.721 61 2 0 650 710 763 703 1.68e-22 102
pORI00001056 96.721 61 2 0 650 710 877 817 1.68e-22 102
pORI00001020 92.958 71 3 1 642 710 238 308 1.68e-22 102
pORI00001011 96.721 61 2 0 650 710 877 817 1.68e-22 102
pORI00000947 96.721 61 2 0 650 710 785 725 1.68e-22 102
pORI00000921 92.958 71 3 1 642 710 266 336 1.68e-22 102
pORI00000834 96.721 61 2 0 650 710 877 817 1.68e-22 102
pORI00000446 92.958 71 3 1 642 710 266 336 1.68e-22 102
pORI00000306 98.214 56 1 0 654 709 433 378 2.18e-21 99
pORI00000012 98.214 56 1 0 654 709 764 819 2.18e-21 99
pORI00000112 96.491 57 1 1 654 709 1672 1728 1.01e-19 94