RefSeq NZ_CP024670
DoriC accession number pORI00001059
OriC length 1052 nt
OriC AT content 0.6122
The location of oriC region 42668..43719 nt
Browse in NCBI
OriC map
OriC sequences
TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTACGGGCGCAATGCAGGAGAACTAACAGAACCTCCCTAAAACGCTCTGAATCGCATTTTAAGCGATTTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACGAGGGACAAATTTATGGTCTTGAAAATTGAGATTCATAAGGCATCAAATATTTTTTTGATGATTTTAAGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTTAGCTTGCGGGTAATAATCATCGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTCGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTGTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACAATGAGA
TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTACGGGCGCAATGCAGGAGAACTAACAGAACCTCCCTAAAACGCTCTGAATCGCATTTTAAGCGATTTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACGAGGGACAAATTTATGGTCTTGAAAATTGAGATTCATAAGGCATCAAATATTTTTTTGATGATTTTAAGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTTAGCTTGCGGGTAATAATCATCGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTCGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTGTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACAATGAGA
AT-rich region
The information of repeat sequences

Motif AAACATGAGAGCTTCCTCGGTTAAACATGATADCTTCCTCG

StartP-valueSite
7271.46e-25TTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATG
6831.46e-25TTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATG
7711.23e-24TTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCA
9532.73e-19CACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATC

Motif GCGDAGCGMBDTACHGVGCGHSKNAGCGG

StartP-valueSite
106.43e-14TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTA
2822.06e-12AACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCG
2433.29e-12CTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGA
1604.74e-12GAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAA

Motif AATMTGHTYTGAATC

StartP-valueSite
8871.12e-08ATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGAT
844.44e-08GAACCTCCCTAAAACGCTCTGAATCGCATTTTAAG
2178.64e-08AATAACGGATCATATGATCTGAATCTCTCTGGTTT
8652.49e-07CTTTCTGGTGAATCTATTTTGAATCTGTTGTTAAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00001059 100.0 1052 0 0 1 1052 1 1052 0.0 1943
pORI00001059 97.727 88 2 0 726 813 682 769 1.27e-37 152
pORI00001059 97.727 88 2 0 682 769 726 813 1.27e-37 152
pORI00001059 93.939 66 4 0 748 813 682 747 4.65e-22 100
pORI00001059 93.939 66 4 0 682 747 748 813 4.65e-22 100
pORI00001059 95.455 44 2 0 770 813 682 725 3.64e-13 71
pORI00001059 95.455 44 2 0 682 725 770 813 3.64e-13 71
pORI00001058 99.905 1052 0 1 1 1052 1 1051 0.0 1936
pORI00001058 97.727 88 2 0 726 813 681 768 1.27e-37 152
pORI00001058 97.727 88 2 0 682 769 725 812 1.27e-37 152
pORI00001058 93.939 66 4 0 748 813 681 746 4.65e-22 100
pORI00001058 93.939 66 4 0 682 747 747 812 4.65e-22 100
pORI00001058 95.455 44 2 0 770 813 681 724 3.64e-13 71
pORI00001058 95.455 44 2 0 682 725 769 812 3.64e-13 71
pORI00001192 99.144 1052 8 1 1 1052 1 1051 0.0 1892
pORI00001192 100.0 88 0 0 726 813 681 768 5.84005e-41 163
pORI00001192 93.182 88 6 0 682 769 725 812 5.93e-31 130
pORI00001192 100.0 66 0 0 682 747 747 812 9.92e-29 122
pORI00001192 93.939 66 4 0 748 813 681 746 4.65e-22 100
pORI00001192 95.455 44 2 0 770 813 681 724 3.64e-13 71
pORI00000968 99.144 1052 8 1 1 1052 1 1051 0.0 1892
pORI00000968 100.0 88 0 0 726 813 681 768 5.84005e-41 163
pORI00000968 93.182 88 6 0 682 769 725 812 5.93e-31 130
pORI00000968 100.0 66 0 0 682 747 747 812 9.92e-29 122
pORI00000968 93.939 66 4 0 748 813 681 746 4.65e-22 100
pORI00000968 95.455 44 2 0 770 813 681 724 3.64e-13 71
pORI00000723 99.144 1052 8 1 1 1052 1051 1 0.0 1892
pORI00000723 100.0 88 0 0 726 813 371 284 5.84005e-41 163
pORI00000723 93.182 88 6 0 682 769 327 240 5.93e-31 130
pORI00000723 100.0 66 0 0 682 747 305 240 9.92e-29 122
pORI00000723 93.939 66 4 0 748 813 371 306 4.65e-22 100
pORI00000723 95.455 44 2 0 770 813 371 328 3.64e-13 71
pORI00000722 99.144 1052 8 1 1 1052 1051 1 0.0 1892
pORI00000722 100.0 88 0 0 726 813 371 284 5.84005e-41 163
pORI00000722 93.182 88 6 0 682 769 327 240 5.93e-31 130
pORI00000722 100.0 66 0 0 682 747 305 240 9.92e-29 122
pORI00000722 93.939 66 4 0 748 813 371 306 4.65e-22 100
pORI00000722 95.455 44 2 0 770 813 371 328 3.64e-13 71
pORI00000604 99.14 1046 8 1 1 1046 1 1045 0.0 1881
pORI00000604 100.0 88 0 0 726 813 681 768 5.84005e-41 163
pORI00000604 93.182 88 6 0 682 769 725 812 5.93e-31 130
pORI00000604 100.0 66 0 0 682 747 747 812 9.92e-29 122
pORI00000604 93.939 66 4 0 748 813 681 746 4.65e-22 100
pORI00000604 95.455 44 2 0 770 813 681 724 3.64e-13 71
pORI00000998 98.859 1052 11 1 1 1052 1 1051 0.0 1875
pORI00000998 97.727 88 2 0 726 813 681 768 1.27e-37 152
pORI00000998 100.0 66 0 0 682 747 747 812 9.92e-29 122
pORI00000998 95.455 44 2 0 770 813 681 724 3.64e-13 71
pORI00000578 98.661 971 10 3 76 1046 281 1248 0.0 1718
pORI00000578 100.0 88 0 0 726 813 884 971 5.84005e-41 163
pORI00000578 93.182 88 6 0 682 769 928 1015 5.93e-31 130
pORI00000578 100.0 66 0 0 682 747 950 1015 9.92e-29 122
pORI00000578 93.939 66 4 0 748 813 884 949 4.65e-22 100
pORI00000578 95.455 44 2 0 770 813 884 927 3.64e-13 71
pORI00000999 98.558 971 11 3 76 1046 281 1248 0.0 1712
pORI00000999 100.0 88 0 0 726 813 884 971 5.84005e-41 163
pORI00000999 93.182 88 6 0 682 769 928 1015 5.93e-31 130
pORI00000999 100.0 66 0 0 682 747 950 1015 9.92e-29 122
pORI00000999 93.939 66 4 0 748 813 884 949 4.65e-22 100
pORI00000999 95.455 44 2 0 770 813 884 927 3.64e-13 71
pORI00000548 98.051 975 18 1 72 1046 974 1 0.0 1694
pORI00000548 97.727 88 2 0 682 769 321 234 1.27e-37 152
pORI00000548 92.045 88 7 0 726 813 365 278 2.76e-29 124
pORI00000548 98.485 66 1 0 748 813 365 300 4.62e-27 117
pORI00000548 93.939 66 4 0 682 747 299 234 4.65e-22 100
pORI00000548 95.455 44 2 0 682 725 277 234 3.64e-13 71
pORI00001062 97.403 462 11 1 592 1052 462 1 0.0 785
pORI00001062 91.667 240 15 5 76 314 825 590 0.0 327
pORI00001062 100.0 88 0 0 726 813 371 284 5.84005e-41 163
pORI00001062 93.182 88 6 0 682 769 327 240 5.93e-31 130
pORI00001062 100.0 66 0 0 682 747 305 240 9.92e-29 122
pORI00001062 93.939 66 4 0 748 813 371 306 4.65e-22 100
pORI00001062 95.455 44 2 0 770 813 371 328 3.64e-13 71
pORI00000697 87.611 226 21 6 592 814 475 254 0.0 255
pORI00000697 95.614 114 4 1 682 794 364 251 0.0 182
pORI00000697 94.595 111 6 0 703 813 387 277 9.66896e-44 172
pORI00000697 98.876 89 1 0 725 813 387 299 7.56001e-40 159
pORI00000697 93.478 92 5 1 682 772 342 251 1.27e-32 135
pORI00000697 97.143 70 1 1 682 750 320 251 4.62e-27 117
pORI00000697 95.522 67 3 0 747 813 387 321 2.78e-24 108
pORI00000697 97.778 45 1 0 769 813 387 343 2.18e-15 79
pORI00000914 90.291 103 10 0 80 182 108 210 1.27e-32 135
pORI00000595 90.291 103 10 0 80 182 108 210 1.27e-32 135
pORI00001084 98.592 71 1 0 254 324 680 610 7.67e-30 126
pORI00000043 100.0 57 0 0 256 312 773 829 9.99e-24 106
pORI00000056 96.491 57 2 0 256 312 633 689 2.16e-20 95