RefSeq NZ_CP029728
DoriC accession number pORI00001192
OriC length 1051 nt
OriC AT content 0.6137
The location of oriC region 17796..18846 nt
Browse in NCBI
OriC map
OriC sequences
TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTACGGGCGCAATGCAGGAGAACTAACAGAACCTCCCTAAAACGCTCTGAATCGCATTTTAAGCGATTTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACTAGGGACAAATTTATGGTCTTGAAAATTGAGATACATAAGGCATCAAATATTTTTTTGATGATTTTATGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTAGCTTGCGGGTAATAATCATCGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTTGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTGTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACAATGAGA
TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTACGGGCGCAATGCAGGAGAACTAACAGAACCTCCCTAAAACGCTCTGAATCGCATTTTAAGCGATTTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACTAGGGACAAATTTATGGTCTTGAAAATTGAGATACATAAGGCATCAAATATTTTTTTGATGATTTTATGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTAGCTTGCGGGTAATAATCATCGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTTGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTGTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACAATGAGA
AT-rich region
The information of repeat sequences

Motif TAAACATGAGAGCTTCCTCGG

StartP-valueSite
7911.32e-13CTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCAC
7471.32e-13CTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGA
7251.32e-13CTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGA
6811.32e-13GTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGA
7697.34e-13CTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGA

Motif GCGDAGCGMBDTACWGVGCGWSKNAGCG

StartP-valueSite
102.00e-14TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACT
2826.93e-12AACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGC
2431.08e-11CTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGG
1601.52e-11GAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAA

Motif CGMACGMA

StartP-valueSite
3415.04e-06AGGATCAGTACGCACGAATATTATATTT
5867.89e-06CCTGAATATTCGCACGCATTAAAAGCCT
1491.68e-05ATGGTTGTATCGAACGAAGCGGCAGAGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00001192 100.0 1051 0 0 1 1051 1 1051 0.0 1941
pORI00001192 95.455 88 4 0 725 812 681 768 2.74e-34 141
pORI00001192 95.455 88 4 0 681 768 725 812 2.74e-34 141
pORI00001192 100.0 66 0 0 747 812 681 746 9.91e-29 122
pORI00001192 100.0 66 0 0 681 746 747 812 9.91e-29 122
pORI00000968 100.0 1051 0 0 1 1051 1 1051 0.0 1941
pORI00000968 95.455 88 4 0 725 812 681 768 2.74e-34 141
pORI00000968 95.455 88 4 0 681 768 725 812 2.74e-34 141
pORI00000968 100.0 66 0 0 747 812 681 746 9.91e-29 122
pORI00000968 100.0 66 0 0 681 746 747 812 9.91e-29 122
pORI00000723 100.0 1051 0 0 1 1051 1051 1 0.0 1941
pORI00000723 95.455 88 4 0 681 768 327 240 2.74e-34 141
pORI00000723 95.455 88 4 0 725 812 371 284 2.74e-34 141
pORI00000723 100.0 66 0 0 681 746 305 240 9.91e-29 122
pORI00000723 100.0 66 0 0 747 812 371 306 9.91e-29 122
pORI00000722 100.0 1051 0 0 1 1051 1051 1 0.0 1941
pORI00000722 95.455 88 4 0 681 768 327 240 2.74e-34 141
pORI00000722 95.455 88 4 0 725 812 371 284 2.74e-34 141
pORI00000722 100.0 66 0 0 681 746 305 240 9.91e-29 122
pORI00000722 100.0 66 0 0 747 812 371 306 9.91e-29 122
pORI00000604 100.0 1045 0 0 1 1045 1 1045 0.0 1930
pORI00000604 95.455 88 4 0 725 812 681 768 2.74e-34 141
pORI00000604 95.455 88 4 0 681 768 725 812 2.74e-34 141
pORI00000604 100.0 66 0 0 747 812 681 746 9.91e-29 122
pORI00000604 100.0 66 0 0 681 746 747 812 9.91e-29 122
pORI00000998 99.715 1051 3 0 1 1051 1 1051 0.0 1925
pORI00000998 97.727 88 2 0 725 812 681 768 1.26e-37 152
pORI00000998 93.182 88 6 0 681 768 725 812 5.92e-31 130
pORI00000998 100.0 66 0 0 681 746 747 812 9.91e-29 122
pORI00000998 96.97 66 2 0 747 812 681 746 2.15e-25 111
pORI00001058 99.239 1051 8 0 1 1051 1 1051 0.0 1897
pORI00001058 100.0 88 0 0 681 768 725 812 5.84005e-41 163
pORI00001058 93.182 88 6 0 725 812 681 768 5.92e-31 130
pORI00001058 100.0 66 0 0 747 812 681 746 9.91e-29 122
pORI00001058 93.939 66 4 0 681 746 747 812 4.64e-22 100
pORI00001058 95.455 44 2 0 681 724 769 812 3.64e-13 71
pORI00001059 99.144 1052 8 1 1 1051 1 1052 0.0 1892
pORI00001059 100.0 88 0 0 681 768 726 813 5.84005e-41 163
pORI00001059 93.182 88 6 0 725 812 682 769 5.92e-31 130
pORI00001059 100.0 66 0 0 747 812 682 747 9.91e-29 122
pORI00001059 93.939 66 4 0 681 746 748 813 4.64e-22 100
pORI00001059 95.455 44 2 0 681 724 770 813 3.64e-13 71
pORI00000578 98.763 970 10 2 76 1045 281 1248 0.0 1724
pORI00000578 95.455 88 4 0 725 812 884 971 2.74e-34 141
pORI00000578 95.455 88 4 0 681 768 928 1015 2.74e-34 141
pORI00000578 100.0 66 0 0 747 812 884 949 9.91e-29 122
pORI00000578 100.0 66 0 0 681 746 950 1015 9.91e-29 122
pORI00000999 98.66 970 11 2 76 1045 281 1248 0.0 1718
pORI00000999 95.455 88 4 0 725 812 884 971 2.74e-34 141
pORI00000999 95.455 88 4 0 681 768 928 1015 2.74e-34 141
pORI00000999 100.0 66 0 0 747 812 884 949 9.91e-29 122
pORI00000999 100.0 66 0 0 681 746 950 1015 9.91e-29 122
pORI00000548 97.741 974 22 0 72 1045 974 1 0.0 1677
pORI00000548 100.0 88 0 0 681 768 321 234 5.84005e-41 163
pORI00000548 93.939 66 4 0 681 746 299 234 4.64e-22 100
pORI00000548 92.424 66 5 0 747 812 365 300 2.16e-20 95
pORI00000548 97.727 44 1 0 769 812 365 322 7.83e-15 77
pORI00000548 95.455 44 2 0 681 724 277 234 3.64e-13 71
pORI00001062 98.268 462 7 1 591 1051 462 1 0.0 808
pORI00001062 91.667 240 15 5 76 314 825 590 0.0 327
pORI00001062 95.455 88 4 0 681 768 327 240 2.74e-34 141
pORI00001062 95.455 88 4 0 725 812 371 284 2.74e-34 141
pORI00001062 100.0 66 0 0 681 746 305 240 9.91e-29 122
pORI00001062 100.0 66 0 0 747 812 371 306 9.91e-29 122
pORI00000697 88.496 226 19 6 591 813 475 254 0.0 267
pORI00000697 94.595 111 6 0 702 812 387 277 9.66896e-44 172
pORI00000697 93.86 114 6 1 681 793 364 251 3.48923e-43 171
pORI00000697 96.629 89 3 0 724 812 387 299 1.64e-36 148
pORI00000697 95.652 92 3 1 681 771 342 251 5.88e-36 147
pORI00000697 98.507 67 1 0 746 812 387 321 1.28e-27 119
pORI00000697 97.143 70 1 1 681 749 320 251 4.61e-27 117
pORI00000914 90.291 103 10 0 80 182 108 210 1.27e-32 135
pORI00000595 90.291 103 10 0 80 182 108 210 1.27e-32 135
pORI00001084 98.592 71 1 0 254 324 680 610 7.66e-30 126
pORI00000043 100.0 57 0 0 256 312 773 829 9.98e-24 106
pORI00000056 96.491 57 2 0 256 312 633 689 2.16e-20 95