RefSeq NC_019129
DoriC accession number pORI00000548
OriC length 974 nt
OriC AT content 0.6294
The location of oriC region 10522..11495 nt
Browse in NCBI
OriC map
OriC sequences
TGTTCCAACACTCTTGATAATCAGACTTTAACACCAGAAACATGATATTACAATACAATCGATATCATGTTTAACCGAGTATCTTCTCATGTTTCATATCTGTGATTTATCTCACAAAGGTAATCCATGCTCAAAATCCACACTGGATTCAAGGCAGATTAACAACAGATTCAAAATAGATTCACCAGAAAGAACAACGAATTAGTATTCTTATGACACATTTTGTGGATATCACCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCCCATGTTTAACCGAGGAAGTTATCATGTTTATACAAAAAACATGCTTAAAATCAATGAATTAGAACGACTCTAAGTTTTTAAGTTTTTAAGAAAGACAAGAAAAGATAAGGCTTTTAATGCGTGCGAATATTCAGGAACTGTGGATAACTCAACAAAACCAGCAACGATGATGGTTCCTTACCATAAATCTGTCCCCCGATGATTATTACCCGCAAGCTAAAACAAACATCATCAATCATTAAAACTCATAACTTTCAATAAGTTAAAATCATCAAAAAAATATTTGATGCCTTATGAATCTCAATTTTCAAGACCATAAATTTGTCCCTAGTTAACTTTAAGTTATTGAAATAAATATAATATTCGTGCGTACTGATTCTAATGTCACATCGCAAAAATTCCGCTTCCTCGCTCACTCAGTCGCTACGCTCCTGCCGTTCGGCTGCGGCGAGCGGTATCTCCTTTCTCAAAACCAGAGAGATTCAGATCATATGATCCGTTATTTGATCCTTTTTGGATCTTCCACTAAGAAGCCCTGAATCGCGCTCTGCCGCTTCGTTCGATACAACCATGAGGAAAACCATGCGAAATGAAAAAAATCGCTTAAAATGCGATTCAGAGCGTTTTAGGGAGGTTCTG
TGTTCCAACACTCTTGATAATCAGACTTTAACACCAGAAACATGATATTACAATACAATCGATATCATGTTTAACCGAGTATCTTCTCATGTTTCATATCTGTGATTTATCTCACAAAGGTAATCCATGCTCAAAATCCACACTGGATTCAAGGCAGATTAACAACAGATTCAAAATAGATTCACCAGAAAGAACAACGAATTAGTATTCTTATGACACATTTTGTGGATATCACCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCCCATGTTTAACCGAGGAAGTTATCATGTTTATACAAAAAACATGCTTAAAATCAATGAATTAGAACGACTCTAAGTTTTTAAGTTTTTAAGAAAGACAAGAAAAGATAAGGCTTTTAATGCGTGCGAATATTCAGGAACTGTGGATAACTCAACAAAACCAGCAACGATGATGGTTCCTTACCATAAATCTGTCCCCCGATGATTATTACCCGCAAGCTAAAACAAACATCATCAATCATTAAAACTCATAACTTTCAATAAGTTAAAATCATCAAAAAAATATTTGATGCCTTATGAATCTCAATTTTCAAGACCATAAATTTGTCCCTAGTTAACTTTAAGTTATTGAAATAAATATAATATTCGTGCGTACTGATTCTAATGTCACATCGCAAAAATTCCGCTTCCTCGCTCACTCAGTCGCTACGCTCCTGCCGTTCGGCTGCGGCGAGCGGTATCTCCTTTCTCAAAACCAGAGAGATTCAGATCATATGATCCGTTATTTGATCCTTTTTGGATCTTCCACTAAGAAGCCCTGAATCGCGCTCTGCCGCTTCGTTCGATACAACCATGAGGAAAACCATGCGAAATGAAAAAAATCGCTTAAAATGCGATTCAGAGCGTTTTAGGGAGGTTCTG
AT-rich region
The information of repeat sequences

Motif TCTCATGTTTAACCGAGGAAG

StartP-valueSite
3111.95e-13CCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCCCATGTT
2671.95e-13CCGAGGAAGCTCTCATGTTTAACCGAGGAAGTTATCATGTT
2451.95e-13CCGAGGAAGCTCTCATGTTTAACCGAGGAAGCTCTCATGTT
3333.36e-13CCGAGGAAGCTCCCATGTTTAACCGAGGAAGTTATCATGTT
2896.50e-13CCGAGGAAGTTATCATGTTTAACCGAGGAAGCTCTCATGTT

Motif TCNGCYGCBDCGHTC

StartP-valueSite
8821.12e-08TGAATCGCGCTCTGCCGCTTCGTTCGATACAACCA
7743.64e-08CTCCTGCCGTTCGGCTGCGGCGAGCGGTATCTCCT
7354.83e-08TCGCAAAAATTCCGCTTCCTCGCTCACTCAGTCGC
7527.00e-08CCTCGCTCACTCAGTCGCTACGCTCCTGCCGTTCG

Motif GATTCARADCAKATT

StartP-valueSite
1461.23e-08ATCCACACTGGATTCAAGGCAGATTAACAACAGAT
9484.60e-08CTTAAAATGCGATTCAGAGCGTTTTAGGGAGGTTC
8159.64e-08AAACCAGAGAGATTCAGATCATATGATCCGTTATT
1682.85e-07ATTAACAACAGATTCAAAATAGATTCACCAGAAAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000548 100.0 974 0 0 1 974 1 974 0.0 1799
pORI00000548 92.045 88 7 0 278 365 234 321 2.55e-29 124
pORI00000548 92.045 88 7 0 234 321 278 365 2.55e-29 124
pORI00000548 98.485 66 1 0 300 365 234 299 4.27e-27 117
pORI00000548 98.485 66 1 0 234 299 300 365 4.27e-27 117
pORI00001058 98.152 974 18 0 1 974 1045 72 0.0 1700
pORI00001058 97.727 88 2 0 234 321 768 681 1.17e-37 152
pORI00001058 92.045 88 7 0 278 365 812 725 2.55e-29 124
pORI00001058 98.485 66 1 0 300 365 812 747 4.27e-27 117
pORI00001058 93.939 66 4 0 234 299 746 681 4.3e-22 100
pORI00001058 95.455 44 2 0 234 277 724 681 3.37e-13 71
pORI00001059 98.051 975 18 1 1 974 1046 72 0.0 1694
pORI00001059 97.727 88 2 0 234 321 769 682 1.17e-37 152
pORI00001059 92.045 88 7 0 278 365 813 726 2.55e-29 124
pORI00001059 98.485 66 1 0 300 365 813 748 4.27e-27 117
pORI00001059 93.939 66 4 0 234 299 747 682 4.3e-22 100
pORI00001059 95.455 44 2 0 234 277 725 682 3.37e-13 71
pORI00001192 97.741 974 22 0 1 974 1045 72 0.0 1677
pORI00001192 100.0 88 0 0 234 321 768 681 5.40004e-41 163
pORI00001192 93.939 66 4 0 234 299 746 681 4.3e-22 100
pORI00001192 92.424 66 5 0 300 365 812 747 2e-20 95
pORI00001192 97.727 44 1 0 322 365 812 769 7.24e-15 77
pORI00001192 95.455 44 2 0 234 277 724 681 3.37e-13 71
pORI00000968 97.741 974 22 0 1 974 1045 72 0.0 1677
pORI00000968 100.0 88 0 0 234 321 768 681 5.40004e-41 163
pORI00000968 93.939 66 4 0 234 299 746 681 4.3e-22 100
pORI00000968 92.424 66 5 0 300 365 812 747 2e-20 95
pORI00000968 97.727 44 1 0 322 365 812 769 7.24e-15 77
pORI00000968 95.455 44 2 0 234 277 724 681 3.37e-13 71
pORI00000723 97.741 974 22 0 1 974 7 980 0.0 1677
pORI00000723 100.0 88 0 0 234 321 284 371 5.40004e-41 163
pORI00000723 93.939 66 4 0 234 299 306 371 4.3e-22 100
pORI00000723 92.424 66 5 0 300 365 240 305 2e-20 95
pORI00000723 97.727 44 1 0 322 365 240 283 7.24e-15 77
pORI00000723 95.455 44 2 0 234 277 328 371 3.37e-13 71
pORI00000722 97.741 974 22 0 1 974 7 980 0.0 1677
pORI00000722 100.0 88 0 0 234 321 284 371 5.40004e-41 163
pORI00000722 93.939 66 4 0 234 299 306 371 4.3e-22 100
pORI00000722 92.424 66 5 0 300 365 240 305 2e-20 95
pORI00000722 97.727 44 1 0 322 365 240 283 7.24e-15 77
pORI00000722 95.455 44 2 0 234 277 328 371 3.37e-13 71
pORI00000604 97.741 974 22 0 1 974 1045 72 0.0 1677
pORI00000604 100.0 88 0 0 234 321 768 681 5.40004e-41 163
pORI00000604 93.939 66 4 0 234 299 746 681 4.3e-22 100
pORI00000604 92.424 66 5 0 300 365 812 747 2e-20 95
pORI00000604 97.727 44 1 0 322 365 812 769 7.24e-15 77
pORI00000604 95.455 44 2 0 234 277 724 681 3.37e-13 71
pORI00000998 97.433 974 25 0 1 974 1045 72 0.0 1661
pORI00000998 97.727 88 2 0 234 321 768 681 1.17e-37 152
pORI00000998 94.318 88 5 0 278 365 812 725 1.18e-32 135
pORI00000998 92.424 66 5 0 300 365 812 747 2e-20 95
pORI00000998 97.727 44 1 0 322 365 812 769 7.24e-15 77
pORI00000998 95.455 44 2 0 234 277 724 681 3.37e-13 71
pORI00000578 96.907 970 28 2 1 970 1248 281 0.0 1624
pORI00000578 100.0 88 0 0 234 321 971 884 5.40004e-41 163
pORI00000578 93.939 66 4 0 234 299 949 884 4.3e-22 100
pORI00000578 92.424 66 5 0 300 365 1015 950 2e-20 95
pORI00000578 97.727 44 1 0 322 365 1015 972 7.24e-15 77
pORI00000578 95.455 44 2 0 234 277 927 884 3.37e-13 71
pORI00000999 96.804 970 29 2 1 970 1248 281 0.0 1618
pORI00000999 100.0 88 0 0 234 321 971 884 5.40004e-41 163
pORI00000999 93.939 66 4 0 234 299 949 884 4.3e-22 100
pORI00000999 92.424 66 5 0 300 365 1015 950 2e-20 95
pORI00000999 97.727 44 1 0 322 365 1015 972 7.24e-15 77
pORI00000999 95.455 44 2 0 234 277 927 884 3.37e-13 71
pORI00001062 94.737 456 23 1 1 455 7 462 0.0 708
pORI00001062 91.667 240 15 5 732 970 590 825 0.0 327
pORI00001062 100.0 88 0 0 234 321 284 371 5.40004e-41 163
pORI00001062 93.939 66 4 0 234 299 306 371 4.3e-22 100
pORI00001062 92.424 66 5 0 300 365 240 305 2e-20 95
pORI00001062 97.727 44 1 0 322 365 240 283 7.24e-15 77
pORI00001062 95.455 44 2 0 234 277 328 371 3.37e-13 71
pORI00000697 85.841 226 25 6 233 455 254 475 0.0 233
pORI00000697 96.491 114 3 1 253 365 251 364 0.0 187
pORI00000697 95.495 111 5 0 234 344 277 387 1.4013e-45 178
pORI00000697 98.876 89 1 0 234 322 299 387 6.99e-40 159
pORI00000697 95.522 67 3 0 234 300 321 387 2.57e-24 108
pORI00000697 92.857 70 4 1 297 365 251 320 4.3e-22 100
pORI00000697 97.778 45 1 0 234 278 343 387 2.01e-15 79
pORI00000914 90.291 103 10 0 864 966 210 108 1.18e-32 135
pORI00000595 90.291 103 10 0 864 966 210 108 1.18e-32 135
pORI00001084 95.0 80 4 0 713 792 601 680 7.09e-30 126
pORI00000043 100.0 57 0 0 734 790 829 773 9.23e-24 106
pORI00000056 96.491 57 2 0 734 790 689 633 2e-20 95