RefSeq NZ_CP023373
DoriC accession number pORI00000998
OriC length 1051 nt
OriC AT content 0.6166
The location of oriC region 30320..6 nt
Browse in NCBI
OriC map
OriC sequences
TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTACGGGCGCAATGCAGGAGAACTAACAGAACCTCCCTAAAACGCTCTGAATCGCATTTTAAGCGATTTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACTAGGGACAAATTTATGGTCTTGAAAATTGAGATACATAAGGCATCAAATATTTTTTTGATGATTTTATGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTAGCTTGCGGGTAATAATCATAGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTTGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTGTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACAATGAGA
TGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGCGTTAGCGAACTACGGGCGCAATGCAGGAGAACTAACAGAACCTCCCTAAAACGCTCTGAATCGCATTTTAAGCGATTTTTTTCATTTCGCATGGTTTTCCTCATGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCAGGGCTTCTTAGTGGAAGATCCAAAAAGGATCAAATAACGGATCATATGATCTGAATCTCTCTGGTTTTGAGAAAGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGATGTGACATTAGGATCAGTACGCACGAATATTATATTTATTTCAATAAGTTAAAGTTAACTAGGGACAAATTTATGGTCTTGAAAATTGAGATACATAAGGCATCAAATATTTTTTTGATGATTTTATGTTATTGAAAGTTATGAGTTTTAATGATTGATGATGTTTGTTTTAGCTTGCGGGTAATAATCATAGGGGGACAGATTTATGGTAAGGAACCATCATCGTTGCTGGTTTTGTTGAGTTATCCACAGTTCCTGAATATTCGCACGCATTAAAAGCCTTATCTTTTCTTGTTTTTCTTAAAAACTTAAAAACTTAGAGTAGCTCTAATTTATTGATTTTAAGCGTGTTTTTTGTCTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTCGGTGATATCCACAAAATGTGTCATAAGAATACTAATTCGTTGTTCTTTCTGGTGAATCTATTTTGAATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGATTTTGAGCATGGATTACCTTTGTGAGATAAATCACAGATATGAAACATGAGAAGATACTCGGTTAAACATGATATTGATTGTGTTGTAATATCATGTTTCTGGTGTTAAAGTCTGATTATCAAGAGTGTTGGAACAATGAGA
AT-rich region
The information of repeat sequences

Motif ARCTTCCTCGGTTAAACATGA

StartP-valueSite
7792.45e-13TAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTC
7352.45e-13TAAACATGATAACTTCCTCGGTTAAACATGAGAGCTTCCTC
7132.45e-13TAAACATGATAACTTCCTCGGTTAAACATGATAACTTCCTC
7574.36e-13TAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTC
6914.36e-13TAAACATGAGAGCTTCCTCGGTTAAACATGATAACTTCCTC

Motif GMGCGANGCRGCNGA

StartP-valueSite
1502.07e-08TGGTTGTATCGAACGAAGCGGCAGAGCGCGATTCA
2584.57e-08AGGAGATACCGCTCGCCGCAGCCGAACGGCAGGAG
2971.22e-07GCGACTGAGTGAGCGAGGAAGCGGAATTTTTGCGA
2803.27e-07CGAACGGCAGGAGCGTAGCGACTGAGTGAGCGAGG
523.77e-07CGAACTACGGGCGCAATGCAGGAGAACTAACAGAA

Motif AATMTGHTYTGAATC

StartP-valueSite
8861.12e-08ATCTGTTGTTAATCTGCCTTGAATCCAGTGTGGAT
844.44e-08GAACCTCCCTAAAACGCTCTGAATCGCATTTTAAG
2178.68e-08AATAACGGATCATATGATCTGAATCTCTCTGGTTT
8642.52e-07CTTTCTGGTGAATCTATTTTGAATCTGTTGTTAAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000998 100.0 1051 0 0 1 1051 1 1051 0.0 1941
pORI00000998 95.455 88 4 0 725 812 681 768 2.74e-34 141
pORI00000998 95.455 88 4 0 681 768 725 812 2.74e-34 141
pORI00000998 96.97 66 2 0 747 812 681 746 2.15e-25 111
pORI00000998 96.97 66 2 0 681 746 747 812 2.15e-25 111
pORI00001192 99.715 1051 3 0 1 1051 1 1051 0.0 1925
pORI00001192 97.727 88 2 0 681 768 725 812 1.26e-37 152
pORI00001192 93.182 88 6 0 725 812 681 768 5.92e-31 130
pORI00001192 100.0 66 0 0 747 812 681 746 9.91e-29 122
pORI00001192 96.97 66 2 0 681 746 747 812 2.15e-25 111
pORI00000968 99.715 1051 3 0 1 1051 1 1051 0.0 1925
pORI00000968 97.727 88 2 0 681 768 725 812 1.26e-37 152
pORI00000968 93.182 88 6 0 725 812 681 768 5.92e-31 130
pORI00000968 100.0 66 0 0 747 812 681 746 9.91e-29 122
pORI00000968 96.97 66 2 0 681 746 747 812 2.15e-25 111
pORI00000723 99.715 1051 3 0 1 1051 1051 1 0.0 1925
pORI00000723 97.727 88 2 0 681 768 327 240 1.26e-37 152
pORI00000723 93.182 88 6 0 725 812 371 284 5.92e-31 130
pORI00000723 100.0 66 0 0 747 812 371 306 9.91e-29 122
pORI00000723 96.97 66 2 0 681 746 305 240 2.15e-25 111
pORI00000722 99.715 1051 3 0 1 1051 1051 1 0.0 1925
pORI00000722 97.727 88 2 0 681 768 327 240 1.26e-37 152
pORI00000722 93.182 88 6 0 725 812 371 284 5.92e-31 130
pORI00000722 100.0 66 0 0 747 812 371 306 9.91e-29 122
pORI00000722 96.97 66 2 0 681 746 305 240 2.15e-25 111
pORI00000604 99.713 1045 3 0 1 1045 1 1045 0.0 1914
pORI00000604 97.727 88 2 0 681 768 725 812 1.26e-37 152
pORI00000604 93.182 88 6 0 725 812 681 768 5.92e-31 130
pORI00000604 100.0 66 0 0 747 812 681 746 9.91e-29 122
pORI00000604 96.97 66 2 0 681 746 747 812 2.15e-25 111
pORI00001058 98.953 1051 11 0 1 1051 1 1051 0.0 1881
pORI00001058 97.727 88 2 0 681 768 725 812 1.26e-37 152
pORI00001058 100.0 66 0 0 747 812 681 746 9.91e-29 122
pORI00001058 95.455 44 2 0 681 724 769 812 3.64e-13 71
pORI00001059 98.859 1052 11 1 1 1051 1 1052 0.0 1875
pORI00001059 97.727 88 2 0 681 768 726 813 1.26e-37 152
pORI00001059 100.0 66 0 0 747 812 682 747 9.91e-29 122
pORI00001059 95.455 44 2 0 681 724 770 813 3.64e-13 71
pORI00000578 98.454 970 13 2 76 1045 281 1248 0.0 1707
pORI00000578 97.727 88 2 0 681 768 928 1015 1.26e-37 152
pORI00000578 93.182 88 6 0 725 812 884 971 5.92e-31 130
pORI00000578 100.0 66 0 0 747 812 884 949 9.91e-29 122
pORI00000578 96.97 66 2 0 681 746 950 1015 2.15e-25 111
pORI00000999 98.351 970 14 2 76 1045 281 1248 0.0 1701
pORI00000999 97.727 88 2 0 681 768 928 1015 1.26e-37 152
pORI00000999 93.182 88 6 0 725 812 884 971 5.92e-31 130
pORI00000999 100.0 66 0 0 747 812 884 949 9.91e-29 122
pORI00000999 96.97 66 2 0 681 746 950 1015 2.15e-25 111
pORI00000548 97.433 974 25 0 72 1045 974 1 0.0 1661
pORI00000548 97.727 88 2 0 681 768 321 234 1.26e-37 152
pORI00000548 94.318 88 5 0 725 812 365 278 1.27e-32 135
pORI00000548 92.424 66 5 0 747 812 365 300 2.16e-20 95
pORI00000548 97.727 44 1 0 769 812 365 322 7.83e-15 77
pORI00000548 95.455 44 2 0 681 724 277 234 3.64e-13 71
pORI00001062 97.835 462 9 1 591 1051 462 1 0.0 797
pORI00001062 91.667 240 15 5 76 314 825 590 0.0 327
pORI00001062 97.727 88 2 0 681 768 327 240 1.26e-37 152
pORI00001062 93.182 88 6 0 725 812 371 284 5.92e-31 130
pORI00001062 100.0 66 0 0 747 812 371 306 9.91e-29 122
pORI00001062 96.97 66 2 0 681 746 305 240 2.15e-25 111
pORI00000697 87.611 226 21 6 591 813 475 254 0.0 255
pORI00000697 94.595 111 6 0 702 812 387 277 9.66896e-44 172
pORI00000697 95.652 92 3 1 681 771 342 251 5.88e-36 147
pORI00000697 94.382 89 5 0 724 812 387 299 3.54e-33 137
pORI00000697 98.507 67 1 0 746 812 387 321 1.28e-27 119
pORI00000697 94.286 70 3 1 681 749 320 251 9.98e-24 106
pORI00000914 90.291 103 10 0 80 182 108 210 1.27e-32 135
pORI00000595 90.291 103 10 0 80 182 108 210 1.27e-32 135
pORI00001084 98.592 71 1 0 254 324 680 610 7.66e-30 126
pORI00000043 100.0 57 0 0 256 312 773 829 9.98e-24 106
pORI00000056 96.491 57 2 0 256 312 633 689 2.16e-20 95