RefSeq NC_013718
DoriC accession number pORI00000478
OriC length 1009 nt
OriC AT content 0.6056
The location of oriC region 5662..6670 nt
Browse in NCBI
OriC map
OriC sequences
CAAAATGAGGATCATAATTAAAAGAACTCTTTCATAGTATTCAATAAAATCAGTTAGTTATATTAAACCGCCCTCGGAATGAAATATTCAGGTTGTGACTAAACATGAGAACTTTCTCGGTCTTCACAGGATCAGATTCTGATGAACAGAAAGCCTCTGTAAGCGTTTTTCGCGCCTCTCATGCCTGAAGGGCATTTAAACCCCGTTTCGTGCGTCTGAGCGTGTTTTAGAGGCTATCAAGCGACTCATCACCGAAGGAACAACAACAGAATTACCAGCGATATGTGAGAAATGACTCCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTTAGTGAGCGAGGAAGCGGAATGTCTTCGATGCAGCATATGAATCCGTACGCTCTGGTCTGACCTCATCTTGTGATTTTGCTGATTTCAACTCAAAAAATTCACAATGCGCTCTATTCTTTTTTTCTAATTTCTTTTTTCTAAAAGATAGATCACTCCTATGTTACATATAATATTTCCTTTTTCAGGGCCGTTTTTTCTTTTGTTTTTCAATTAATTGTAATGCTAACTAGGGACAGATTTATGGTTAAAAGGGGACAGATTTATGGTTATTTGCGTTTTTATCAGGGGACAGATTTATGGTTAAAAGGGGACAGATTTATGGTCAACTAGGGACAGATTTAGTGTGGATAACTTTTTTATCCACAGGCTGTGGATAACTTTTTTAGATTCAACTCGGATTCGTTATGGATTCTCTATGAATCTGAATTGGATTAGTGACTTAGATCACATTTAAGATGTTTGGCTCGATGGGTTTTTGATGATGCATTCCCTTCTGGTTTGCTGTATTGACTGCCTCTGACTGAGGGTGAAAATGCGCCGTTCAGCCAGGTTTGACTCTTCAAACAGGGGACAGATTTATGGTTTATTAGTTATGTGGGGACAAAAAAAAATTGCGTCCCTAGTTTGGGTGTGAGAAACTTCTTTTGATTTTTAACTCACAGGAAGGGGATCTGT
CAAAATGAGGATCATAATTAAAAGAACTCTTTCATAGTATTCAATAAAATCAGTTAGTTATATTAAACCGCCCTCGGAATGAAATATTCAGGTTGTGACTAAACATGAGAACTTTCTCGGTCTTCACAGGATCAGATTCTGATGAACAGAAAGCCTCTGTAAGCGTTTTTCGCGCCTCTCATGCCTGAAGGGCATTTAAACCCCGTTTCGTGCGTCTGAGCGTGTTTTAGAGGCTATCAAGCGACTCATCACCGAAGGAACAACAACAGAATTACCAGCGATATGTGAGAAATGACTCCGCTCGCCGCAGTCGAACGACCGAGCGTAGCGAGTTAGTGAGCGAGGAAGCGGAATGTCTTCGATGCAGCATATGAATCCGTACGCTCTGGTCTGACCTCATCTTGTGATTTTGCTGATTTCAACTCAAAAAATTCACAATGCGCTCTATTCTTTTTTTCTAATTTCTTTTTTCTAAAAGATAGATCACTCCTATGTTACATATAATATTTCCTTTTTCAGGGCCGTTTTTTCTTTTGTTTTTCAATTAATTGTAATGCTAACTAGGGACAGATTTATGGTTAAAAGGGGACAGATTTATGGTTATTTGCGTTTTTATCAGGGGACAGATTTATGGTTAAAAGGGGACAGATTTATGGTCAACTAGGGACAGATTTAGTGTGGATAACTTTTTTATCCACAGGCTGTGGATAACTTTTTTAGATTCAACTCGGATTCGTTATGGATTCTCTATGAATCTGAATTGGATTAGTGACTTAGATCACATTTAAGATGTTTGGCTCGATGGGTTTTTGATGATGCATTCCCTTCTGGTTTGCTGTATTGACTGCCTCTGACTGAGGGTGAAAATGCGCCGTTCAGCCAGGTTTGACTCTTCAAACAGGGGACAGATTTATGGTTTATTAGTTATGTGGGGACAAAAAAAAATTGCGTCCCTAGTTTGGGTGTGAGAAACTTCTTTTGATTTTTAACTCACAGGAAGGGGATCTGT
AT-rich region
The information of repeat sequences

Motif AAMAGGGGACAGATTTATGGT

StartP-valueSite
8973.34e-13TGACTCTTCAAACAGGGGACAGATTTATGGTTTATTAGTTA
6378.48e-13ATTTATGGTTAAAAGGGGACAGATTTATGGTCAACTAGGGA
5818.48e-13ATTTATGGTTAAAAGGGGACAGATTTATGGTTATTTGCGTT
6152.08e-12TTGCGTTTTTATCAGGGGACAGATTTATGGTTAAAAGGGGA
5595.51e-12TTGTAATGCTAACTAGGGACAGATTTATGGTTAAAAGGGGA

Motif ATGHRVVRWAWGMMTCYGYWMGCBBYDKTCKVRCSWC

StartP-valueSite
3621.60e-17AATGTCTTCGATGCAGCATATGAATCCGTACGCTCTGGTCTGACCTCATCTTGTGAT
2836.77e-17TACCAGCGATATGTGAGAAATGACTCCGCTCGCCGCAGTCGAACGACCGAGCGTAGC
1426.89e-16TCAGATTCTGATGAACAGAAAGCCTCTGTAAGCGTTTTTCGCGCCTCTCATGCCTGA

Motif STGTGRRWAACTTYTTT

StartP-valueSite
6764.17e-10GACAGATTTAGTGTGGATAACTTTTTTATCCACAGGC
7021.65e-09TATCCACAGGCTGTGGATAACTTTTTTAGATTCAACT
9638.00e-09CCTAGTTTGGGTGTGAGAAACTTCTTTTGATTTTTAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000595 100.0 1009 0 0 1 1009 357 1365 0.0 1864
pORI00000595 100.0 38 0 0 620 657 920 957 3.49e-13 71
pORI00000595 100.0 38 0 0 564 601 976 1013 3.49e-13 71
pORI00000478 100.0 1009 0 0 1 1009 1 1009 0.0 1864
pORI00000478 100.0 38 0 0 620 657 564 601 3.49e-13 71
pORI00000478 100.0 38 0 0 564 601 620 657 3.49e-13 71
pORI00000914 99.703 1009 3 0 1 1009 357 1365 0.0 1847
pORI00000914 100.0 38 0 0 620 657 920 957 3.49e-13 71
pORI00000914 100.0 38 0 0 564 601 976 1013 3.49e-13 71
pORI00001164 96.721 61 2 0 294 354 877 817 1.24e-22 102
pORI00001144 92.958 71 3 1 286 354 238 308 1.24e-22 102
pORI00001062 96.721 61 2 0 294 354 651 591 1.24e-22 102
pORI00001057 96.721 61 2 0 294 354 763 703 1.24e-22 102
pORI00001056 96.721 61 2 0 294 354 877 817 1.24e-22 102
pORI00001020 92.958 71 3 1 286 354 238 308 1.24e-22 102
pORI00001011 96.721 61 2 0 294 354 877 817 1.24e-22 102
pORI00000947 96.721 61 2 0 294 354 785 725 1.24e-22 102
pORI00000921 92.958 71 3 1 286 354 266 336 1.24e-22 102
pORI00000834 96.721 61 2 0 294 354 877 817 1.24e-22 102
pORI00000446 92.958 71 3 1 286 354 266 336 1.24e-22 102
pORI00000072 96.721 61 2 0 294 354 591 531 1.24e-22 102
pORI00000031 92.958 71 3 1 286 354 461 531 1.24e-22 102
pORI00000990 92.857 70 3 1 286 353 605 674 4.45e-22 100
pORI00000702 96.667 60 2 0 294 353 763 704 4.45e-22 100
pORI00000421 92.857 70 3 1 286 353 462 531 4.45e-22 100
pORI00000306 98.214 56 1 0 298 353 433 378 1.6e-21 99
pORI00000012 98.214 56 1 0 298 353 764 819 1.6e-21 99
pORI00000112 96.491 57 1 1 298 353 1672 1728 7.45e-20 94