RefSeq NC_011767
DoriC accession number pORI00000286
OriC length 1314 nt
OriC AT content 0.5365
The location of oriC region 644..1957 nt
Browse in NCBI
OriC map
OriC sequences
CCATGCCAAAGGTAACAGCAGTGCACTTACGCTTCCTCGCGTTGACAGACTTCGCTAGTCAACACTGCGGCGAGCGTTGCGGTTCAGGAAAAAACCAATAGGATGTAAGAAGAACAAAAAAGGGAAAGGCCACCCATACACGGGCGTTTTTCCATAGGCTTCGCCCTCCTGATGAACATCACAGAAATCGGATGATTTCCGGTGCTCAAATCAGAAGTGGCGAAACCTGACAGGACTTAAAGATCCCCACCGTTTCCGGTAGGTCGCTCCCTCGTGCGCTTTCCTGTTCCCACCCTGAGGTTTACCCGTTGCAGACCGCCGTAAGGTGGCGTTTTCTCATTCCTTCCCATGCAACTGGGTGCCTTGTAGGTGGTTCGCTCCAAGCTGGACTATATGCACGAACTCCCCGTTTAGTCCGACTACCGCATCGCATCAGGTAACACACTCTTGAATCCAAGCCTGACAGACACGAAAATCGCCAGTGGCGGTAGCCATTGGTAACTAGGGGTTCACGGGAGATTTACGGATAACTCTATATAACAATATATACAATTAACTTGAAGACTCACGCAGCATAACGCTACACTGAGAGAACAAATTTGGTGACTGTTTCCCGTGAAGATCCAGTTACCGCGGTTCAAAATGTTTTATCGACATTGTGAACCTTCGAAAAAACCACCTTGCCGGGTGGTTTTTTCGTTTCTGAGCAAGAGATTACGCGTAGCAATACAGGATCTCAAGAAGATCCTTTACTGATTGCTACTGCCTAGACGATTAAGTTGACCGCCGGTAGCGGTAGCTGTAGATGACGGCGACACAGCACAGCACCGCCGCCTGTGTCCATCTGACAGGCTGTCAGGGACAGAGTGGCAAGCATGCAGGCCCAAATACAGCTAAACTGGCAGGGAAAATTTTGTGGAAGCGATCTGGTACACCCTGCTACCAAGGTTCATAAGCCCCCAAACTTACTGAACTGATGAAAAAAGAAAGCATCACAAAGCACAACAACAGTTGCTAGTTCCGTAGTTGTAAGCCTAACCGAAGATCAGGTATACTTAAGTTAAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTTAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGTGATTTACTACCTTTAAGTAATAAAGTAAAAGAGGCGACTACATAGTCGCCTTTTTTACGAGAAAAAT
CCATGCCAAAGGTAACAGCAGTGCACTTACGCTTCCTCGCGTTGACAGACTTCGCTAGTCAACACTGCGGCGAGCGTTGCGGTTCAGGAAAAAACCAATAGGATGTAAGAAGAACAAAAAAGGGAAAGGCCACCCATACACGGGCGTTTTTCCATAGGCTTCGCCCTCCTGATGAACATCACAGAAATCGGATGATTTCCGGTGCTCAAATCAGAAGTGGCGAAACCTGACAGGACTTAAAGATCCCCACCGTTTCCGGTAGGTCGCTCCCTCGTGCGCTTTCCTGTTCCCACCCTGAGGTTTACCCGTTGCAGACCGCCGTAAGGTGGCGTTTTCTCATTCCTTCCCATGCAACTGGGTGCCTTGTAGGTGGTTCGCTCCAAGCTGGACTATATGCACGAACTCCCCGTTTAGTCCGACTACCGCATCGCATCAGGTAACACACTCTTGAATCCAAGCCTGACAGACACGAAAATCGCCAGTGGCGGTAGCCATTGGTAACTAGGGGTTCACGGGAGATTTACGGATAACTCTATATAACAATATATACAATTAACTTGAAGACTCACGCAGCATAACGCTACACTGAGAGAACAAATTTGGTGACTGTTTCCCGTGAAGATCCAGTTACCGCGGTTCAAAATGTTTTATCGACATTGTGAACCTTCGAAAAAACCACCTTGCCGGGTGGTTTTTTCGTTTCTGAGCAAGAGATTACGCGTAGCAATACAGGATCTCAAGAAGATCCTTTACTGATTGCTACTGCCTAGACGATTAAGTTGACCGCCGGTAGCGGTAGCTGTAGATGACGGCGACACAGCACAGCACCGCCGCCTGTGTCCATCTGACAGGCTGTCAGGGACAGAGTGGCAAGCATGCAGGCCCAAATACAGCTAAACTGGCAGGGAAAATTTTGTGGAAGCGATCTGGTACACCCTGCTACCAAGGTTCATAAGCCCCCAAACTTACTGAACTGATGAAAAAAGAAAGCATCACAAAGCACAACAACAGTTGCTAGTTCCGTAGTTGTAAGCCTAACCGAAGATCAGGTATACTTAAGTTAAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTTAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGTGATTTACTACCTTTAAGTAATAAAGTAAAAGAGGCGACTACATAGTCGCCTTTTTTACGAGAAAAAT
AT-rich region
The information of repeat sequences

Motif GGTGATTTGCTACCTTTAAGTGCAGCTAG

StartP-valueSite
12092.79e-18TAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGT
11732.79e-18TAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGT
11372.79e-18TAGAAATTCAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGT
11012.79e-18TAGAAATTTAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTCAGGT
10652.79e-18CTTAAGTTAAGGTGATTTGCTACCTTTAAGTGCAGCTAGAAATTTAGGT

Motif SSDCCBTTNBVGGTVGKTYKCTCCHTCCTGVNCWW

StartP-valueSite
2476.23e-16TTAAAGATCCCCACCGTTTCCGGTAGGTCGCTCCCTCGTGCGCTTTCCTGTTCCC
6768.77e-14TTCGAAAAAACCACCTTGCCGGGTGGTTTTTTCGTTTCTGAGCAAGAGATTACGC
3166.61e-12CCGTTGCAGACCGCCGTAAGGTGGCGTTTTCTCATTCCTTCCCATGCAACTGGGT
1421.31e-11ACCCATACACGGGCGTTTTTCCATAGGCTTCGCCCTCCTGATGAACATCACAGAA
3582.15e-11CATGCAACTGGGTGCCTTGTAGGTGGTTCGCTCCAAGCTGGACTATATGCACGAA

Motif AGHACANCDCCRGTGGCKGTDKCCVTHG

StartP-valueSite
4707.72e-12CTGACAGACACGAAAATCGCCAGTGGCGGTAGCCATTGGTAACTAGGG
9995.97e-11AGCATCACAAAGCACAACAACAGTTGCTAGTTCCGTAGTTGTAAGCCT
7781.52e-10TAGACGATTAAGTTGACCGCCGGTAGCGGTAGCTGTAGATGACGGCGA
8191.78e-10ACGGCGACACAGCACAGCACCGCCGCCTGTGTCCATCTGACAGGCTGT
5915.20e-10CTACACTGAGAGAACAAATTTGGTGACTGTTTCCCGTGAAGATCCAGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000286 100.0 1314 0 0 1 1314 1 1314 0.0 2427
pORI00000286 97.674 172 4 0 1094 1265 1058 1229 0.0 296
pORI00000286 97.674 172 4 0 1058 1229 1094 1265 0.0 296
pORI00000286 97.059 136 4 0 1130 1265 1058 1193 0.0 230
pORI00000286 97.059 136 4 0 1058 1193 1130 1265 0.0 230
pORI00000286 96.0 100 4 0 1166 1265 1058 1157 7.33005e-41 163
pORI00000286 96.0 100 4 0 1058 1157 1166 1265 7.33005e-41 163
pORI00000286 93.75 64 4 0 1202 1265 1058 1121 7.54e-21 97
pORI00000286 93.75 64 4 0 1058 1121 1202 1265 7.54e-21 97
pORI00000200 87.55 498 40 18 19 502 814 325 0.0 556
pORI00000200 81.609 174 24 6 580 751 273 106 4.44e-33 137
pORI00000334 82.899 614 76 28 145 749 392 985 0.0 525
pORI00000322 82.899 614 76 28 145 749 392 985 0.0 525
pORI00000314 80.707 311 49 10 217 521 534 229 0.0 231
pORI00000075 80.707 311 49 10 217 521 534 229 0.0 231
pORI00000238 78.63 365 58 13 145 503 828 478 0.0 224
pORI00000060 78.63 365 59 12 145 503 1759 2110 0.0 224
pORI00000008 72.549 561 106 32 219 751 1103 1643 1.24e-33 139
pORI00000069 95.833 48 0 2 657 703 3184 3138 9.82e-15 77