RefSeq NC_008354
DoriC accession number pORI00000277
OriC length 559 nt
OriC AT content 0.6583
The location of oriC region 2489..3047 nt
Browse in NCBI
OriC map
OriC sequences
TTTATCCCTCCTAATTTAGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGTTCGCCACGTTGACCATCAACTATGTCGAAATCTACGCTTTGTCCATCTTCTAAAGATTTATAGCCTTCTCCAACAATGTTAGAAAAAGTGAACGAATACGTCGTTACCATTTTCTCTTTCAACCAAAACCTTTTTCTGAATTAAACCATTTTACTGTACCGTTATTCATATAGAATACCTCCGAGTGCTTTTGCACATAATATTTGTAACAATTTCATTATAAAAAAGAGGATATTCTAGAAAATACACTACAATTAAATTCACGAGCTTTTATTACGTTAGATTAAGTATACGCTTATTTATTGGATAAGTACATCTCTTAGATTTTAAAAGCACGCATTTATGCCGAGAAAATTTATTGATCGTTGAGAAGAACCCTTAACTAAACTTGTAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAA
TTTATCCCTCCTAATTTAGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGTTCGCCACGTTGACCATCAACTATGTCGAAATCTACGCTTTGTCCATCTTCTAAAGATTTATAGCCTTCTCCAACAATGTTAGAAAAAGTGAACGAATACGTCGTTACCATTTTCTCTTTCAACCAAAACCTTTTTCTGAATTAAACCATTTTACTGTACCGTTATTCATATAGAATACCTCCGAGTGCTTTTGCACATAATATTTGTAACAATTTCATTATAAAAAAGAGGATATTCTAGAAAATACACTACAATTAAATTCACGAGCTTTTATTACGTTAGATTAAGTATACGCTTATTTATTGGATAAGTACATCTCTTAGATTTTAAAAGCACGCATTTATGCCGAGAAAATTTATTGATCGTTGAGAAGAACCCTTAACTAAACTTGTAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAA
AT-rich region
The information of repeat sequences

Motif KCCGAG

StartP-valueSite
4054.39e-05ACGCATTTATGCCGAGAAAATTTATT
5201.36e-04TGTTAAGGGTTCCGAGGCTCAACGTC
2401.36e-04ATAGAATACCTCCGAGTGCTTTTGCA
4841.87e-04GAGCTATTAAGCCGACCATTCGACAA

Motif AAACGAG

StartP-valueSite
385.15e-05AACGAGTTGAAAACGAGTTTCTTCTTG
275.15e-05TAGGAATTTGAAACGAGTTGAAAACGA

Motif GTTAGAWWAAGTRWACG

StartP-valueSite
1386.85e-10CTCCAACAATGTTAGAAAAAGTGAACGAATACGTCGT
3382.10e-09CTTTTATTACGTTAGATTAAGTATACGCTTATTTATT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000277 100.0 559 0 0 1 559 1 559 0.0 1033
pORI00000276 97.674 516 0 8 52 559 555 1066 0.0 876
pORI00000325 93.636 330 17 4 230 558 1 327 0.0 490
pORI00000232 98.851 174 1 1 386 559 961 1133 0.0 309
pORI00000201 98.266 173 2 1 387 559 515 686 0.0 302
pORI00000203 98.795 166 1 1 394 559 688 852 0.0 294
pORI00000230 98.788 165 1 1 395 559 731 894 0.0 292
pORI00000274 98.193 166 2 1 394 559 405 569 0.0 289
pORI00000206 97.11 173 2 2 389 559 651 822 0.0 289
pORI00000099 98.182 165 3 0 395 559 802 966 0.0 289
pORI00000024 97.11 173 2 2 389 559 638 809 0.0 289
pORI00000036 98.765 162 1 1 394 555 268 428 0.0 287
pORI00000148 98.16 163 3 0 394 556 302 140 0.0 285
pORI00000186 97.59 166 2 2 390 555 534 371 0.0 283
pORI00000145 96.386 166 6 0 394 559 701 866 0.0 274
pORI00000324 96.386 166 4 2 381 546 358 521 0.0 272
pORI00000326 93.452 168 11 0 392 559 145 312 0.0 250
pORI00000360 93.976 166 6 4 394 558 602 764 0.0 248
pORI00000323 93.333 165 11 0 391 555 273 109 0.0 244
pORI00000215 95.946 148 5 1 398 545 607 461 0.0 239
pORI00000327 93.082 159 11 0 401 559 1306 1148 0.0 233
pORI00000278 100.0 59 0 0 1 59 1 59 4.04e-25 110
pORI00000233 100.0 59 0 0 1 59 1 59 4.04e-25 110
pORI00000202 100.0 59 0 0 1 59 1 59 4.04e-25 110
pORI00000146 98.305 59 1 0 1 59 1 59 1.88e-23 104
pORI00000275 96.61 59 2 0 1 59 1 59 8.75e-22 99
pORI00000231 96.61 59 2 0 1 59 1 59 8.75e-22 99
pORI00000207 96.61 59 2 0 1 59 1 59 8.75e-22 99
pORI00000204 96.61 59 2 0 1 59 1 59 8.75e-22 99
pORI00000100 96.61 59 2 0 1 59 1 59 8.75e-22 99
pORI00000025 96.61 59 2 0 1 59 1 59 8.75e-22 99
pORI00000279 100.0 37 0 0 23 59 241 205 6.86e-13 69
pORI00000005 100.0 37 0 0 23 59 195 159 6.86e-13 69