RefSeq NC_008352
DoriC accession number pORI00000275
OriC length 218 nt
OriC AT content 0.711
The location of oriC region 2151..90 nt
Browse in NCBI
OriC map
OriC sequences
TTTATCCCTCCTAACTTGGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACGTTCTTTTTAAAAATATGTATTAAACCTTGATATGACAGTGTTTTTGTTTAATTTTAGGCGTGAAAGAAAAATTTGACATAAAAAAGCTCCAGGTATAAGATTTAATTGTCGAGAAAAAATCTAACTGGGGGTCTTTTTAT
TTTATCCCTCCTAACTTGGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACGTTCTTTTTAAAAATATGTATTAAACCTTGATATGACAGTGTTTTTGTTTAATTTTAGGCGTGAAAGAAAAATTTGACATAAAAAAGCTCCAGGTATAAGATTTAATTGTCGAGAAAAAATCTAACTGGGGGTCTTTTTAT
AT-rich region
The information of repeat sequences

Motif CTAACTKGGG

StartP-valueSite
1991.98e-07GAGAAAAAATCTAACTGGGGGTCTTTTTAT
116.25e-07TTTATCCCTCCTAACTTGGGAATTTGAAAC

Motif AAACGAG

StartP-valueSite
384.66e-05AACGAGTTGAAAACGAGTTTCTTCTTG
274.66e-05TGGGAATTTGAAACGAGTTGAAAACGA

Motif GKCGWGAAA

StartP-valueSite
1352.85e-06TTTAATTTTAGGCGTGAAAGAAAAATTTG
1865.79e-06AGATTTAATTGTCGAGAAAAAATCTAACT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000275 100.0 218 0 0 1 218 1 218 0.0 403
pORI00000204 85.52 221 26 6 1 218 1 218 0.0 226
pORI00000100 85.068 221 28 5 1 218 1 219 0.0 220
pORI00000233 84.793 217 29 4 1 215 1 215 0.0 215
pORI00000025 84.615 221 28 6 1 218 1 218 0.0 215
pORI00000207 90.184 163 14 2 1 162 1 162 0.0 211
pORI00000146 86.957 184 15 7 1 180 1 179 0.0 198
pORI00000231 81.532 222 32 9 1 218 1 217 5.60519e-45 174
pORI00000005 80.597 201 28 11 23 218 195 1 4.1e-36 145
pORI00000278 96.774 62 2 0 1 62 1 62 6.95e-24 104
pORI00000202 96.774 62 2 0 1 62 1 62 6.95e-24 104
pORI00000277 96.61 59 2 0 1 59 1 59 3.23e-22 99
pORI00000279 100.0 45 0 0 23 67 241 197 9.06e-18 84