RefSeq NC_015173
DoriC accession number pORI00000325
OriC length 391 nt
OriC AT content 0.6931
The location of oriC region 26414..26804 nt
Browse in NCBI
OriC map
OriC sequences
ATAGAATACCTCCGAGTGCTTTTGCACATAATATTTGTAACAACTTCATTTATAAAAAAGAGGATATTCTAAAAAATACACTACAATTAAATTCACGAGCTTTATTACGTTAGATTAAGTATACGCTTATTTCTTTGTTAAGTACAGCTTTAATTTTAATAGCACGCATTTATGCCGAGAAAATTTATTGATCAATGAGAAGAACCCTTAACTAAACTTGAAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACGATTCGACAAGTTTAGGGTTTGTTAAGGGTTCAGAGGCTCGTTGTCAATAAAGCAATTGGAATAAAGCATCTATGATTATTTGAAAACATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTAATT
ATAGAATACCTCCGAGTGCTTTTGCACATAATATTTGTAACAACTTCATTTATAAAAAAGAGGATATTCTAAAAAATACACTACAATTAAATTCACGAGCTTTATTACGTTAGATTAAGTATACGCTTATTTCTTTGTTAAGTACAGCTTTAATTTTAATAGCACGCATTTATGCCGAGAAAATTTATTGATCAATGAGAAGAACCCTTAACTAAACTTGAAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACGATTCGACAAGTTTAGGGTTTGTTAAGGGTTCAGAGGCTCGTTGTCAATAAAGCAATTGGAATAAAGCATCTATGATTATTTGAAAACATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTAATT
AT-rich region
The information of repeat sequences

Motif KCCGAS

StartP-valueSite
1743.44e-05ACGCATTTATGCCGAGAAAATTTATT
2536.25e-05GAGCTATTAAGCCGACGATTCGACAA
111.29e-04ATAGAATACCTCCGAGTGCTTTTGCA

Motif GCWCGY

StartP-valueSite
1625.36e-05AATTTTAATAGCACGCATTTATGCCG
2951.14e-04GGGTTCAGAGGCTCGTTGTCAATAAA

Motif CRYGAGCT

StartP-valueSite
2408.64e-06GTCGGCATAGCGTGAGCTATTAAGCCGA
948.64e-06CAATTAAATTCACGAGCTTTATTACGTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000325 100.0 391 0 0 1 391 1 391 0.0 723
pORI00000276 93.939 330 17 3 1 327 736 1065 0.0 496
pORI00000277 93.636 330 17 4 1 327 230 558 0.0 490
pORI00000360 92.166 217 13 4 163 378 602 815 0.0 303
pORI00000327 98.225 169 1 2 170 336 1306 1138 0.0 294
pORI00000326 98.204 167 3 0 161 327 145 311 0.0 292
pORI00000323 97.619 168 3 1 158 324 276 109 0.0 287
pORI00000232 92.529 174 11 2 154 327 961 1132 0.0 248
pORI00000201 92.899 169 12 0 159 327 517 685 0.0 246
pORI00000203 92.442 172 10 2 158 327 681 851 0.0 243
pORI00000036 93.827 162 9 1 163 324 268 428 0.0 243
pORI00000230 93.293 164 10 1 164 327 731 893 0.0 241
pORI00000099 91.477 176 14 1 164 339 802 976 0.0 241
pORI00000274 92.727 165 11 1 163 327 405 568 0.0 237
pORI00000206 92.727 165 11 1 163 327 658 821 0.0 237
pORI00000024 92.727 165 11 1 163 327 645 808 0.0 237
pORI00000148 92.638 163 12 0 163 325 302 140 0.0 235
pORI00000186 88.119 202 17 7 127 324 569 371 0.0 233
pORI00000145 90.698 172 14 1 158 327 694 865 0.0 228
pORI00000324 90.909 165 14 1 151 315 358 521 0.0 220
pORI00000215 88.485 165 15 4 150 314 621 461 0.0 196