RefSeq NC_019146
DoriC accession number pORI00000100
OriC length 219 nt
OriC AT content 0.6941
The location of oriC region 2563..91 nt
Browse in NCBI
OriC map
OriC sequences
TTTATCCCTCCTAACTTGGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACGTTCTTCTTTAAAACTATGGTTTGTCGTTGATATGACAGTGTTTTTATGTATTTTTGGAGTTGAAAAGAAAATTTGACATGAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAAAACTGGGGGGCTTTTTAT
TTTATCCCTCCTAACTTGGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACGTTCTTCTTTAAAACTATGGTTTGTCGTTGATATGACAGTGTTTTTATGTATTTTTGGAGTTGAAAAGAAAATTTGACATGAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAAAACTGGGGGGCTTTTTAT
AT-rich region
The information of repeat sequences

Motif GASWTGAAAA

StartP-valueSite
1352.55e-06TGTATTTTTGGAGTTGAAAAGAAAATTTGA
312.55e-06AATTTGAAACGAGTTGAAAACGAGTTTCTT
1537.77e-06AAGAAAATTTGACATGAAAAAACCCCAGTT

Motif CCCYMS

StartP-valueSite
63.18e-05TTTATCCCTCCTAACTTGGGA
1654.61e-05CATGAAAAAACCCCAGTTATATTATT

Motif AACTDKGG

StartP-valueSite
2025.25e-06TCTTAAATAAAACTGGGGGGCTTTTTAT
132.50e-05TATCCCTCCTAACTTGGGAATTTGAAAC
905.41e-05TCTTCTTTAAAACTATGGTTTGTCGTTG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000100 100.0 219 0 0 1 219 1 219 0.0 405
pORI00000204 97.717 219 4 1 1 219 1 218 0.0 375
pORI00000207 94.977 219 10 1 1 219 1 218 0.0 342
pORI00000025 94.977 219 10 1 1 219 1 218 0.0 342
pORI00000231 85.586 222 24 8 1 219 1 217 0.0 226
pORI00000275 85.068 221 28 5 1 219 1 218 0.0 220
pORI00000005 84.925 199 24 6 23 219 195 1 0.0 196
pORI00000146 81.696 224 32 9 1 219 1 220 0.0 178
pORI00000233 82.486 177 27 4 1 175 1 175 2.46e-38 152
pORI00000278 96.774 62 2 0 1 62 1 62 6.99e-24 104
pORI00000202 96.774 62 2 0 1 62 1 62 6.99e-24 104
pORI00000277 96.61 59 2 0 1 59 1 59 3.25e-22 99
pORI00000279 100.0 45 0 0 23 67 241 197 9.1e-18 84