RefSeq NC_007769
DoriC accession number pORI00000233
OriC length 217 nt
OriC AT content 0.7051
The location of oriC region 2715..90 nt
Browse in NCBI
OriC map
OriC sequences
TTTATCCCTCCTAATTTAGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATACTAAATAGAAATAACGTTCTTTTTGGTTTTTGGCTATAAACGTTGATAGTAAAGGCTTTTTAAGGGTTTTTATTGTTGAAAGAAAAATTTGACATAAAAAATCCCCAGGTATAAGATTTAATTGTCGAGAAAAAATCTAACCAGGGGGTTTTTAT
TTTATCCCTCCTAATTTAGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATACTAAATAGAAATAACGTTCTTTTTGGTTTTTGGCTATAAACGTTGATAGTAAAGGCTTTTTAAGGGTTTTTATTGTTGAAAGAAAAATTTGACATAAAAAATCCCCAGGTATAAGATTTAATTGTCGAGAAAAAATCTAACCAGGGGGTTTTTAT
AT-rich region
The information of repeat sequences

Motif MCCWSS

StartP-valueSite
1661.78e-05ATAAAAAATCCCCAGGTATAAGATTT
61.03e-04TTTATCCCTCCTAATTTAGGA
2021.53e-04AAAAAATCTAACCAGGGGGTTTTTAT

Motif TGTTGAWAVWAAA

StartP-valueSite
1035.54e-07TGGCTATAAACGTTGATAGTAAAGGCTTTTTAA
1362.01e-06GGGTTTTTATTGTTGAAAGAAAAATTTGACATA
552.96e-06TTTCTTCTTGTCTTGATACTAAATAGAAATAAC
1853.51e-06AAGATTTAATTGTCGAGAAAAAATCTAACCAGG

Motif AAACGAG

StartP-valueSite
384.58e-05AACGAGTTGAAAACGAGTTTCTTCTTG
274.58e-05TAGGAATTTGAAACGAGTTGAAAACGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000233 100.0 217 0 0 1 217 1 217 0.0 401
pORI00000275 84.793 217 29 4 1 215 1 215 0.0 215
pORI00000100 82.486 177 27 4 1 175 1 175 2.44e-38 152
pORI00000207 81.921 177 28 4 1 175 1 175 1.13e-36 147
pORI00000025 81.921 177 28 4 1 175 1 175 1.13e-36 147
pORI00000204 96.512 86 3 0 1 86 1 86 1.47e-35 143
pORI00000146 81.522 184 25 7 1 180 1 179 1.47e-35 143
pORI00000231 78.475 223 36 10 1 217 1 217 2.45e-33 135
pORI00000005 78.283 198 37 6 23 217 195 1 1.91e-29 122
pORI00000278 98.485 66 1 0 1 66 1 66 8.88e-28 117
pORI00000202 98.485 66 1 0 1 66 1 66 8.88e-28 117
pORI00000277 100.0 59 0 0 1 59 1 59 1.49e-25 110
pORI00000279 100.0 43 0 0 23 65 241 199 1.17e-16 81