RefSeq NC_008352
DoriC accession number pORI00000274
OriC length 569 nt
OriC AT content 0.6678
The location of oriC region 1096..1664 nt
Browse in NCBI
OriC map
OriC sequences
CTTAAAAGCTAGCGTTTTTTTTATGTATTTTGCCCCTGCGGGAACTATAGCGTTCAACCGGCATGGTTGCCCAGTTTTACTATGAAAATTTTAATTTGCATGTAGATGGGCAGTGTCTTAAAAAATCAACACTGGATTTGCTCAAATTTTTGGTTGTGAAATTAGAATATATTTATTTGGCTCATATTTGCGTTTTAAGAACGTATATAAGCTTTTAGGTATAAATCTATATAAATAACTCTTAATTCTTCAGAATACCCCTTTAAAATTCAAATAAAGGCATATAAAAATAAAAAGCCAACCCAGATAAAATGGATTGGCTCTTTTTTGCTTATTTTTGCAAAGTAGAATAAAAACTACTCTTAATAAGCGCTCTAAACGGTATAGACATATTATAACAAGAACACGCATTTATGCCGAGAAAATTTATTTATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAA
CTTAAAAGCTAGCGTTTTTTTTATGTATTTTGCCCCTGCGGGAACTATAGCGTTCAACCGGCATGGTTGCCCAGTTTTACTATGAAAATTTTAATTTGCATGTAGATGGGCAGTGTCTTAAAAAATCAACACTGGATTTGCTCAAATTTTTGGTTGTGAAATTAGAATATATTTATTTGGCTCATATTTGCGTTTTAAGAACGTATATAAGCTTTTAGGTATAAATCTATATAAATAACTCTTAATTCTTCAGAATACCCCTTTAAAATTCAAATAAAGGCATATAAAAATAAAAAGCCAACCCAGATAAAATGGATTGGCTCTTTTTTGCTTATTTTTGCAAAGTAGAATAAAAACTACTCTTAATAAGCGCTCTAAACGGTATAGACATATTATAACAAGAACACGCATTTATGCCGAGAAAATTTATTTATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAA
AT-rich region
The information of repeat sequences

Motif TTKGCYCADWTTTGCK

StartP-valueSite
1772.31e-09ATATATTTATTTGGCTCATATTTGCGTTTTAAGAAC
3175.24e-08ATAAAATGGATTGGCTCTTTTTTGCTTATTTTTGCA
661.45e-07AACCGGCATGGTTGCCCAGTTTTACTATGAAAATTT
5028.58e-07AAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGG
1371.03e-06CAACACTGGATTTGCTCAAATTTTTGGTTGTGAAAT

Motif GCCRACC

StartP-valueSite
4946.69e-06GAGCTATTAAGCCGACCATTCGACAAG
2971.98e-05AAAATAAAAAGCCAACCCAGATAAAAT

Motif GSCHYWRCGKSA

StartP-valueSite
328.71e-08TATGTATTTTGCCCCTGCGGGAACTATAGCGT
4743.92e-07GACGAATGTCGGCATAGCGTGAGCTATTAAGC
5355.17e-07AGGGTTCCGAGGCTCAACGTCAATAAAGCAAT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000274 100.0 569 0 0 1 569 1 569 0.0 1051
pORI00000145 90.411 292 24 4 1 289 1 291 0.0 381
pORI00000145 96.471 170 5 1 401 569 697 866 0.0 279
pORI00000203 88.673 309 26 9 1 305 1 304 0.0 368
pORI00000203 96.774 186 4 2 386 569 667 852 0.0 309
pORI00000024 88.04 301 28 8 1 296 1 298 0.0 350
pORI00000024 98.266 173 3 0 397 569 637 809 0.0 303
pORI00000206 88.396 293 27 7 1 289 1 290 0.0 346
pORI00000206 98.266 173 3 0 397 569 650 822 0.0 303
pORI00000099 86.731 309 31 8 1 305 1 303 0.0 335
pORI00000099 98.182 165 2 1 406 569 802 966 0.0 287
pORI00000230 86.711 301 32 7 1 296 1 298 0.0 327
pORI00000230 99.39 164 1 0 406 569 731 894 0.0 298
pORI00000232 85.113 309 35 9 1 305 1 302 0.0 305
pORI00000232 98.182 165 2 1 406 569 969 1133 0.0 287
pORI00000201 81.265 411 36 24 172 569 304 686 0.0 294
pORI00000036 98.788 165 2 0 401 565 264 428 0.0 294
pORI00000277 98.193 166 2 1 405 569 394 559 0.0 289
pORI00000276 97.605 167 2 2 405 569 900 1066 0.0 285
pORI00000186 98.16 163 3 0 403 565 533 371 0.0 285
pORI00000148 97.605 167 3 1 401 566 306 140 0.0 285
pORI00000326 91.758 182 14 1 389 569 131 312 0.0 252
pORI00000324 96.711 152 4 1 406 556 370 521 0.0 252
pORI00000215 97.279 147 4 0 409 555 607 461 0.0 250
pORI00000360 93.976 166 7 3 404 568 601 764 0.0 248
pORI00000325 92.727 165 11 1 405 568 163 327 0.0 237
pORI00000323 92.405 158 11 1 409 565 266 109 0.0 224
pORI00000327 91.824 159 12 1 412 569 1306 1148 0.0 220
pORI00000267 100.0 28 0 0 401 428 209 182 7.04e-08 53
pORI00000266 100.0 28 0 0 401 428 475 448 7.04e-08 53
pORI00000190 100.0 28 0 0 401 428 795 822 7.04e-08 53
pORI00000189 100.0 28 0 0 401 428 475 448 7.04e-08 53
pORI00000121 100.0 28 0 0 401 428 476 449 7.04e-08 53
pORI00000120 100.0 28 0 0 401 428 476 449 7.04e-08 53
pORI00000070 100.0 28 0 0 401 428 476 449 7.04e-08 53