RefSeq NC_015173
DoriC accession number pORI00000326
OriC length 383 nt
OriC AT content 0.6475
The location of oriC region 29565..29947 nt
Browse in NCBI
OriC map
OriC sequences
ACGAACACTGACATGACATATTAGTGGTTAGCTATATTTTTTTACTTTGCAACAGAACCGTTTATTCGTTTAATCATTGAGATTATGGAATAATCTCAAGGGGGAGCTGACACTCCTCCTTCATTACATTCATATTATAACAGGAGTACGCATTTATGCCGAGAAAATTTATTGATCAATGAGAAGAACCCTTAACTAAACTTGAAGACGAATGTCGGCATAGCGTGAGCTATTAAGCTGACGATTCGACAAGTTTTGGGTTTGTTAAGGGTTCAGAGGCTCGTTGTCAATAAAGCAATTGGAATAAAGCAAAAATATGATATATTATAGATCGGGATGTTTATTAAGGGGTTGTTTAAATTCTGAGACAAGGAGTTTTTACA
ACGAACACTGACATGACATATTAGTGGTTAGCTATATTTTTTTACTTTGCAACAGAACCGTTTATTCGTTTAATCATTGAGATTATGGAATAATCTCAAGGGGGAGCTGACACTCCTCCTTCATTACATTCATATTATAACAGGAGTACGCATTTATGCCGAGAAAATTTATTGATCAATGAGAAGAACCCTTAACTAAACTTGAAGACGAATGTCGGCATAGCGTGAGCTATTAAGCTGACGATTCGACAAGTTTTGGGTTTGTTAAGGGTTCAGAGGCTCGTTGTCAATAAAGCAATTGGAATAAAGCAAAAATATGATATATTATAGATCGGGATGTTTATTAAGGGGTTGTTTAAATTCTGAGACAAGGAGTTTTTACA
AT-rich region
The information of repeat sequences

Motif GCTGACRMTYCKMC

StartP-valueSite
1061.13e-09TCAAGGGGGAGCTGACACTCCTCCTTCATTACAT
2371.05e-08GAGCTATTAAGCTGACGATTCGACAAGTTTTGGG

Motif GAACCSTT

StartP-valueSite
1866.93e-06TCAATGAGAAGAACCCTTAACTAAACTT
551.69e-05CTTTGCAACAGAACCGTTTATTCGTTTA

Motif SGGKWTGTT

StartP-valueSite
3484.18e-06TGTTTATTAAGGGGTTGTTTAAATTCTGA
3331.43e-05TATTATAGATCGGGATGTTTATTAAGGGG
2582.07e-05GACAAGTTTTGGGTTTGTTAAGGGTTCAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000326 100.0 383 0 0 1 383 1 383 0.0 708
pORI00000325 98.204 167 3 0 145 311 161 327 0.0 292
pORI00000327 97.024 168 5 0 154 321 1306 1139 0.0 283
pORI00000323 94.565 184 7 3 145 327 272 91 0.0 281
pORI00000323 100.0 59 0 0 1 59 2174 2232 2.72e-25 110
pORI00000274 91.758 182 14 1 131 312 389 569 0.0 252
pORI00000277 93.452 168 11 0 145 312 392 559 0.0 250
pORI00000232 93.939 165 10 0 148 312 969 1133 0.0 250
pORI00000276 92.899 169 11 1 145 312 898 1066 0.0 244
pORI00000230 92.899 169 11 1 144 312 727 894 0.0 244
pORI00000201 93.333 165 11 0 148 312 522 686 0.0 244
pORI00000203 93.333 165 10 1 148 312 689 852 0.0 243
pORI00000036 93.789 161 9 1 148 308 269 428 0.0 241
pORI00000099 92.727 165 12 0 148 312 802 966 0.0 239
pORI00000206 92.727 165 11 1 148 312 659 822 0.0 237
pORI00000024 92.727 165 11 1 148 312 646 809 0.0 237
pORI00000148 92.593 162 12 0 148 309 301 140 0.0 233
pORI00000186 93.082 159 10 1 150 308 528 371 0.0 231
pORI00000145 91.515 165 14 0 148 312 702 866 0.0 228
pORI00000324 92.763 152 11 0 148 299 370 521 0.0 220
pORI00000324 100.0 59 0 0 1 59 1032 974 2.72e-25 110
pORI00000360 90.303 165 12 4 148 311 603 764 0.0 213
pORI00000215 90.541 148 13 1 151 298 607 461 0.0 195