RefSeq NC_007771
DoriC accession number pORI00000204
OriC length 218 nt
OriC AT content 0.7064
The location of oriC region 2434..90 nt
Browse in NCBI
OriC map
OriC sequences
TTTATCCCTCCTAACTTGGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACGTTCTTTTTTAAAAACATGATTTGTCGTTGATATGACAGTGTTTTTATGTATTTTTGGAGTTGAAAAGAAAATTTGACATGAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAAAACTGGGGGCTTTTTAT
TTTATCCCTCCTAACTTGGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACGTTCTTTTTTAAAAACATGATTTGTCGTTGATATGACAGTGTTTTTATGTATTTTTGGAGTTGAAAAGAAAATTTGACATGAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAAAACTGGGGGCTTTTTAT
AT-rich region
The information of repeat sequences

Motif GWSTTGAAAM

StartP-valueSite
1356.19e-06TGTATTTTTGGAGTTGAAAAGAAAATTTGA
316.19e-06AATTTGAAACGAGTTGAAAACGAGTTTCTT
1533.05e-05AAGAAAATTTGACATGAAAAAACCCCAGTT
544.87e-05GTTTCTTCTTGTCTTGATACTATATAGAAA
1845.62e-05TATTATTAAGGTGTCGAATCTTAAATAAAA

Motif CCCYMS

StartP-valueSite
62.71e-05TTTATCCCTCCTAACTTGGGA
1653.95e-05CATGAAAAAACCCCAGTTATATTATT

Motif AACTKGGG

StartP-valueSite
2024.59e-06TCTTAAATAAAACTGGGGGCTTTTTAT
131.46e-05TATCCCTCCTAACTTGGGAATTTGAAAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000204 100.0 218 0 0 1 218 1 218 0.0 403
pORI00000100 97.717 219 4 1 1 218 1 219 0.0 375
pORI00000207 96.33 218 8 0 1 218 1 218 0.0 359
pORI00000025 96.33 218 8 0 1 218 1 218 0.0 359
pORI00000231 86.878 221 22 7 1 218 1 217 0.0 241
pORI00000275 85.52 221 26 6 1 218 1 218 0.0 226
pORI00000005 86.364 198 22 5 23 218 195 1 0.0 211
pORI00000146 82.589 224 29 10 1 218 1 220 0.0 189
pORI00000233 96.512 86 3 0 1 86 1 86 1.47e-35 143
pORI00000278 96.774 62 2 0 1 62 1 62 6.95e-24 104
pORI00000202 96.774 62 2 0 1 62 1 62 6.95e-24 104
pORI00000277 96.61 59 2 0 1 59 1 59 3.23e-22 99
pORI00000279 100.0 45 0 0 23 67 241 197 9.06e-18 84