RefSeq NC_007167
DoriC accession number pORI00000186
OriC length 639 nt
OriC AT content 0.651
The location of oriC region 5181..269 nt
Browse in NCBI
OriC map
OriC sequences
AATAAAAACCTCCTAACATGCTGTAAGTACTGATATGACAGTGTTAGTTGAGGTCGTCTAAATACTATATGATGGTTAGATAAAATTCTTCGCCCCCCCTTATTAGAAGCAGGGGGGCAAAAAATCGCTTGAACGAATGCGCCTCGACAAACCTTTTCAAGCTTTGTTGTGTCGGCGCAAACGTTCTGCGCAAATGCCCCCTACTTTACTAAACGGGAGAACAATTGTATACTTAACTCATCAAAAATTAAAACTCAACTAATATACCTGTCTGCAACGTAAACATCGCCAAATGTTTTTTACGTTGCTTTTTTTAATTGTAGCACAATTACAAACATTGTTAAGTCTAACGCTAAACGATAAGTTCAGATTTATTCCAATTGCTTTATTGACGTTGAGCCTCGGAACCCTTAACAATCCCAAAACTTGTCGAATGGTCGGCTTAATAGCTCACGCTATGCCGACATTCGTCTCCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCATGTTTACTGTAAAATTGATACTGATACAAATAAAAAATAAAAGGATAGTTGCAAATGAAAAATACTTAGAATAAAATTAAATAAAATACGAAAATTAAAAGGAGTTAAAA
AATAAAAACCTCCTAACATGCTGTAAGTACTGATATGACAGTGTTAGTTGAGGTCGTCTAAATACTATATGATGGTTAGATAAAATTCTTCGCCCCCCCTTATTAGAAGCAGGGGGGCAAAAAATCGCTTGAACGAATGCGCCTCGACAAACCTTTTCAAGCTTTGTTGTGTCGGCGCAAACGTTCTGCGCAAATGCCCCCTACTTTACTAAACGGGAGAACAATTGTATACTTAACTCATCAAAAATTAAAACTCAACTAATATACCTGTCTGCAACGTAAACATCGCCAAATGTTTTTTACGTTGCTTTTTTTAATTGTAGCACAATTACAAACATTGTTAAGTCTAACGCTAAACGATAAGTTCAGATTTATTCCAATTGCTTTATTGACGTTGAGCCTCGGAACCCTTAACAATCCCAAAACTTGTCGAATGGTCGGCTTAATAGCTCACGCTATGCCGACATTCGTCTCCAAGTTTAGTTAAGGGTTCTTCTCAACATCAATAAATTTTCTCGGCATAAATGCATGTTTACTGTAAAATTGATACTGATACAAATAAAAAATAAAAGGATAGTTGCAAATGAAAAATACTTAGAATAAAATTAAATAAAATACGAAAATTAAAAGGAGTTAAAA
AT-rich region
The information of repeat sequences

Motif GKTCKKCKCAA

StartP-valueSite
4366.68e-07CTTGTCGAATGGTCGGCTTAATAGCTCACGC
1708.09e-07AGCTTTGTTGTGTCGGCGCAAACGTTCTGCG
1831.08e-06CGGCGCAAACGTTCTGCGCAAATGCCCCCTA
523.13e-06TGTTAGTTGAGGTCGTCTAAATACTATATGA
4904.41e-06TTAGTTAAGGGTTCTTCTCAACATCAATAAA

Motif CGMCAWWYSTYTYYWASBTTDSTT

StartP-valueSite
1459.53e-13GAATGCGCCTCGACAAACCTTTTCAAGCTTTGTTGTGTCGGCGC
4628.31e-12CACGCTATGCCGACATTCGTCTCCAAGTTTAGTTAAGGGTTCTT
2874.77e-11ACGTAAACATCGCCAAATGTTTTTTACGTTGCTTTTTTTAATTG

Motif GCCCCC

StartP-valueSite
1963.96e-05CTGCGCAAATGCCCCCTACTTTACTA
923.96e-05AAAATTCTTCGCCCCCCCTTATTAGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000186 100.0 639 0 0 1 639 1 639 0.0 1181
pORI00000036 98.225 169 2 1 370 537 429 261 0.0 294
pORI00000203 98.773 163 2 0 371 533 848 686 0.0 291
pORI00000230 99.367 158 1 0 371 528 890 733 0.0 287
pORI00000274 98.16 163 3 0 371 533 565 403 0.0 285
pORI00000206 98.16 163 3 0 371 533 818 656 0.0 285
pORI00000024 98.16 163 3 0 371 533 805 643 0.0 285
pORI00000277 97.59 166 2 2 371 534 555 390 0.0 283
pORI00000232 98.742 159 1 1 371 528 1129 971 0.0 281
pORI00000201 97.561 164 3 1 371 533 682 519 0.0 279
pORI00000276 97.006 167 2 3 371 534 1062 896 0.0 278
pORI00000148 97.484 159 3 1 371 528 141 299 0.0 270
pORI00000099 97.484 159 3 1 371 528 962 804 0.0 270
pORI00000145 95.122 164 7 1 371 533 862 699 0.0 257
pORI00000324 97.333 150 3 1 380 528 521 372 0.0 254
pORI00000360 94.479 163 6 3 371 532 761 601 0.0 248
pORI00000215 96.599 147 5 0 381 527 461 607 0.0 244
pORI00000325 88.119 202 17 7 371 569 324 127 0.0 233
pORI00000326 93.082 159 10 1 371 528 308 150 0.0 231
pORI00000323 93.082 159 10 1 370 527 108 266 0.0 231
pORI00000327 92.258 155 11 1 371 524 1152 1306 0.0 219