RefSeq NC_007768
DoriC accession number pORI00000202
OriC length 265 nt
OriC AT content 0.7057
The location of oriC region 2187..90 nt
Browse in NCBI
OriC map
OriC sequences
TTTATCCCTCCTAATTTAGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATAATAAGGGTAACTATTACAGAGTAGAATAGTTACCCTTAAAGTGTTGGTATATCTGGGTTGAAACACAAAAAAAGTTGCTTTTTTTAGCATACTCATGTAGTGTTTTAGGTGTCTAGTCTAAAAACATTATGAGAAAGGAGAAAAAGCAACTTTTTTTATTGTCATAGTTTGTGAAAACTAAGTTGTTTTTTAAGTTATATAAC
TTTATCCCTCCTAATTTAGGAATTTGAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATAATAAGGGTAACTATTACAGAGTAGAATAGTTACCCTTAAAGTGTTGGTATATCTGGGTTGAAACACAAAAAAAGTTGCTTTTTTTAGCATACTCATGTAGTGTTTTAGGTGTCTAGTCTAAAAACATTATGAGAAAGGAGAAAAAGCAACTTTTTTTATTGTCATAGTTTGTGAAAACTAAGTTGTTTTTTAAGTTATATAAC
AT-rich region
The information of repeat sequences

Motif GAAAAMDAGTTWCTTTTTTTAKT

StartP-valueSite
361.12e-10GAAACGAGTTGAAAACGAGTTTCTTCTTGTCTTGATAATAAGG
1282.67e-10GGTTGAAACACAAAAAAAGTTGCTTTTTTTAGCATACTCATGT
2002.64e-09TATGAGAAAGGAGAAAAAGCAACTTTTTTTATTGTCATAGTTT
2358.64e-09CATAGTTTGTGAAAACTAAGTTGTTTTTTAAGTTATATAAC

Motif CCCTYM

StartP-valueSite
67.48e-06TTTATCCCTCCTAATTTAGGA
951.23e-04AGAATAGTTACCCTTAAAGTGTTGGT

Motif TGAAAC

StartP-valueSite
1212.82e-04ATATCTGGGTTGAAACACAAAAAAAG
252.82e-04TTTAGGAATTTGAAACGAGTTGAAAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000202 100.0 265 0 0 1 265 1 265 0.0 490
pORI00000278 88.433 268 22 9 1 265 1 262 0.0 315
pORI00000279 83.673 245 28 12 23 261 241 3 0.0 220
pORI00000233 98.485 66 1 0 1 66 1 66 1.1e-27 117
pORI00000277 100.0 59 0 0 1 59 1 59 1.85e-25 110
pORI00000146 98.387 62 1 0 1 62 1 62 1.85e-25 110
pORI00000275 96.774 62 2 0 1 62 1 62 8.59e-24 104
pORI00000231 96.774 62 2 0 1 62 1 62 8.59e-24 104
pORI00000207 96.774 62 2 0 1 62 1 62 8.59e-24 104
pORI00000204 96.774 62 2 0 1 62 1 62 8.59e-24 104
pORI00000100 96.774 62 2 0 1 62 1 62 8.59e-24 104
pORI00000025 96.774 62 2 0 1 62 1 62 8.59e-24 104
pORI00000005 97.674 43 1 0 23 65 195 153 6.74e-15 75