RefSeq NC_010626
DoriC accession number pORI00000148
OriC length 510 nt
OriC AT content 0.6529
The location of oriC region 2532..133 nt
Browse in NCBI
OriC map
OriC sequences
TATGAGATAATGCCGACTGTACTTTTTACAGTCGGTTTTCTAATGTCACTAACCTGCCCCGTTAGTTGAAGAAGGTTTTTATATTACAGCTCCAGATCCATATCCTTCTTTTTCTGAACCGACTTCTCCTTTTTCGCTTCTTTATTCCAATTGCTTTATTGACGTTGAGCCTCGGAACCCTTAACAATCCCAAAACTTGTCGAATGGTCGGCTTAATAGCTCACGCTATGCCGACATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACGCACAATAAATTTTCTCGGCATAAATGCGTGGTCTAATTTTTATTTTTAATAACCTTGATAGCAAAAAATGCCATTCCAATACAAAACCACATACCTATAATCGATAACCACATAACAGTCATAAAACCACTCCTTTTTAACAAACTTTATCACAAGAAATATTTAAATTTTAAATGCCTTTATTTTGAATTTTAAGGGGCATTTTAAAGATTTAGGGGTAAATCATATAGTTTTATGC
TATGAGATAATGCCGACTGTACTTTTTACAGTCGGTTTTCTAATGTCACTAACCTGCCCCGTTAGTTGAAGAAGGTTTTTATATTACAGCTCCAGATCCATATCCTTCTTTTTCTGAACCGACTTCTCCTTTTTCGCTTCTTTATTCCAATTGCTTTATTGACGTTGAGCCTCGGAACCCTTAACAATCCCAAAACTTGTCGAATGGTCGGCTTAATAGCTCACGCTATGCCGACATTCGTCTGCAAGTTTAGTTAAGGGTTCTTCTCAACGCACAATAAATTTTCTCGGCATAAATGCGTGGTCTAATTTTTATTTTTAATAACCTTGATAGCAAAAAATGCCATTCCAATACAAAACCACATACCTATAATCGATAACCACATAACAGTCATAAAACCACTCCTTTTTAACAAACTTTATCACAAGAAATATTTAAATTTTAAATGCCTTTATTTTGAATTTTAAGGGGCATTTTAAAGATTTAGGGGTAAATCATATAGTTTTATGC
AT-rich region
The information of repeat sequences

Motif TTAAGGG

StartP-valueSite
4841.43e-05TTTTAAAGATTTAGGGGTAAATCATAT
4644.49e-05ATTTTGAATTTTAAGGGGCATTTTAAA
2544.49e-05GCAAGTTTAGTTAAGGGTTCTTCTCAA

Motif GCCGAC

StartP-valueSite
2305.26e-05CTCACGCTATGCCGACATTCGTCTGC
125.26e-05ATGAGATAATGCCGACTGTACTTTTT

Motif STCGGH

StartP-valueSite
2074.20e-05TTGTCGAATGGTCGGCTTAATAGCTC
2861.04e-04AATAAATTTTCTCGGCATAAATGCGT
312.36e-04ACTTTTTACAGTCGGTTTTCTAATGT
1713.26e-04GACGTTGAGCCTCGGAACCCTTAACA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000148 100.0 510 0 0 1 510 1 510 0.0 942
pORI00000230 96.528 288 9 1 140 427 891 605 0.0 475
pORI00000145 94.444 288 16 0 140 427 863 576 0.0 444
pORI00000099 100.0 162 0 0 140 301 963 802 0.0 300
pORI00000203 97.175 177 4 1 140 316 849 674 0.0 298
pORI00000277 98.16 163 3 0 140 302 556 394 0.0 285
pORI00000274 97.605 167 3 1 140 306 566 401 0.0 285
pORI00000206 96.552 174 3 2 140 313 819 649 0.0 285
pORI00000201 96.512 172 6 0 140 311 683 512 0.0 285
pORI00000024 96.552 174 3 2 140 313 806 636 0.0 285
pORI00000232 98.148 162 3 0 140 301 1130 969 0.0 283
pORI00000276 97.561 164 3 1 140 302 1063 900 0.0 279
pORI00000036 97.006 167 4 1 141 307 428 263 0.0 279
pORI00000186 97.484 159 3 1 141 299 371 528 0.0 270
pORI00000324 96.711 152 5 0 150 301 521 370 0.0 254
pORI00000121 89.109 202 18 4 279 478 449 648 0.0 248
pORI00000120 89.109 202 18 4 279 478 449 648 0.0 248
pORI00000267 88.67 203 18 5 279 478 182 382 0.0 243
pORI00000070 88.67 203 18 5 279 478 449 649 0.0 243
pORI00000325 92.638 163 12 0 140 302 325 163 0.0 235
pORI00000360 92.683 164 8 4 140 302 762 602 0.0 233
pORI00000326 92.593 162 12 0 140 301 309 148 0.0 233
pORI00000215 95.27 148 6 1 151 298 461 607 0.0 233
pORI00000323 91.925 161 13 0 138 298 106 266 0.0 226
pORI00000327 92.308 156 12 0 140 295 1151 1306 0.0 222