RefSeq NC_002093
DoriC accession number pORI00000360
OriC length 815 nt
OriC AT content 0.6883
The location of oriC region 1161..1975 nt
Browse in NCBI
OriC map
OriC sequences
AAATGGCATCCATTTGGCATACCATTTAGTGCTCCCAAATGGCTACCTAATAATGTAGCTATTTGGTATCCATTTTTGATTTTAGGTATCCATATGGTAGCCATTTTTGATTTTGTGTAGCTATTCGGTATCTTTTGTGTAGCCGTTCGGGAGTCATATAACAATTTTTATCGCATAAATAGGAATCCCATTTGACACTGTAAAATCAATATTTTGCACAGAAATGGCTACCGAATGCTACATACGGAGACATTTCTGTGCAGGATTCCTCTTATGCTCTTTAAAATACAAGAGTTACATTATACACCTATTTTTTAAGGTTTGACTTTTTATTAAGAAGAATAACCGAGATAGAAAAACATATTTCGTATTCTAAAAGATTTAGAAAATGAATTTTAAAATGATTTAGAAAATGAATTTTAAAATGATTTATCGTCTCTCTGTTGAACGAAAAAAGTTTTTAGTTATTTTTTATACGTGGAATGATTAAATGTCCTAGAAAGGGCTTAAAATGCAAAATAAAAAGACTACTCATTTTTTGAGTAGCCGGGAATAGTTTTTGATGTATTAAATGAAAAGGAGTAATACATTAATCATATCACACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGGAGACGAATGTCGCATAGCGTGACTGATTAAGCCGCAGATTCGACAAGTTTAGGGATTGTTAAGGGTTCGGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCATCTATGATTATTTAAAAATATAAGTTACAATACATTCAAAAATATTTTTGA
AAATGGCATCCATTTGGCATACCATTTAGTGCTCCCAAATGGCTACCTAATAATGTAGCTATTTGGTATCCATTTTTGATTTTAGGTATCCATATGGTAGCCATTTTTGATTTTGTGTAGCTATTCGGTATCTTTTGTGTAGCCGTTCGGGAGTCATATAACAATTTTTATCGCATAAATAGGAATCCCATTTGACACTGTAAAATCAATATTTTGCACAGAAATGGCTACCGAATGCTACATACGGAGACATTTCTGTGCAGGATTCCTCTTATGCTCTTTAAAATACAAGAGTTACATTATACACCTATTTTTTAAGGTTTGACTTTTTATTAAGAAGAATAACCGAGATAGAAAAACATATTTCGTATTCTAAAAGATTTAGAAAATGAATTTTAAAATGATTTAGAAAATGAATTTTAAAATGATTTATCGTCTCTCTGTTGAACGAAAAAAGTTTTTAGTTATTTTTTATACGTGGAATGATTAAATGTCCTAGAAAGGGCTTAAAATGCAAAATAAAAAGACTACTCATTTTTTGAGTAGCCGGGAATAGTTTTTGATGTATTAAATGAAAAGGAGTAATACATTAATCATATCACACGCATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGGAGACGAATGTCGCATAGCGTGACTGATTAAGCCGCAGATTCGACAAGTTTAGGGATTGTTAAGGGTTCGGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCATCTATGATTATTTAAAAATATAAGTTACAATACATTCAAAAATATTTTTGA
AT-rich region
The information of repeat sequences

Motif GTAKCYATTYGGTAKCC

StartP-valueSite
556.36e-10ACCTAATAATGTAGCTATTTGGTATCCATTTTTGATT
861.98e-09TTGATTTTAGGTATCCATATGGTAGCCATTTTTGATT
1392.42e-09TATCTTTTGTGTAGCCGTTCGGGAGTCATATAACAAT
1175.50e-09TTGATTTTGTGTAGCTATTCGGTATCTTTTGTGTAGC
61.05e-08AAATGGCATCCATTTGGCATACCATTTAGTGC

Motif TGCWCMSAAATGGCTACC

StartP-valueSite
302.01e-12TACCATTTAGTGCTCCCAAATGGCTACCTAATAATGTA
2151.60e-11ATCAATATTTTGCACAGAAATGGCTACCGAATGCTACA

Motif CCGAGA

StartP-valueSite
6146.98e-05CGCATTTATGCCGAGAAAATTTATTG
3466.98e-05AGAAGAATAACCGAGATAGAAAAACA
5471.05e-04TTTTGAGTAGCCGGGAATAGTTTTTG
2451.94e-04ATGCTACATACGGAGACATTTCTGTG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000360 100.0 815 0 0 1 815 1 815 0.0 1506
pORI00000325 92.166 217 13 4 602 815 163 378 0.0 303
pORI00000203 94.578 166 6 3 601 764 687 851 0.0 254
pORI00000230 94.512 164 6 3 603 764 731 893 0.0 250
pORI00000277 93.976 166 6 4 602 764 394 558 0.0 248
pORI00000274 93.976 166 7 3 601 764 404 568 0.0 248
pORI00000206 93.976 166 7 3 601 764 657 821 0.0 248
pORI00000186 94.479 163 6 3 601 761 532 371 0.0 248
pORI00000036 94.479 163 6 3 601 761 267 428 0.0 248
pORI00000024 93.976 166 7 3 601 764 644 808 0.0 248
pORI00000232 93.939 165 6 4 603 764 969 1132 0.0 246
pORI00000201 92.982 171 8 4 597 764 516 685 0.0 246
pORI00000276 93.413 167 6 5 602 764 900 1065 0.0 243
pORI00000099 91.525 177 10 5 603 776 802 976 0.0 239
pORI00000145 88.776 196 17 5 572 764 672 865 0.0 235
pORI00000148 92.683 164 8 4 602 762 302 140 0.0 233
pORI00000326 90.303 165 12 4 603 764 148 311 0.0 213
pORI00000215 91.216 148 10 3 606 751 607 461 0.0 198