RefSeq NC_015256
DoriC accession number pORI00000070
OriC length 1220 nt
OriC AT content 0.6762
The location of oriC region 1095..2314 nt
Browse in NCBI
OriC map
OriC sequences
AATTATAAAGCAAAAGATATAAATGCTTTATTTTATATCCCTTACTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATATCCCTTACTGTCCATTTTTATATCCCTTACCCCCGTTTCGCTCTTACGCGCTTAATGGATACAAAACTCCTAGCAGTATATCCTAGCAGTATATATTAGTAGTATATATTAGCAGTCTATCTTAGAGCGCGCGACACTCAAGCTATATAGATATGAAATTAAACAAATTAAATCTTAACAATTCCATTTTATTCAAATTTTTCTAAAGAAACTAGCTCTTTTGCCAGCTATCATTTATACTTTAAACCAATACTTTTAGAGTATTAAAAAAGCACAAAGAAGATTTTTTCGGTAGGTCTTCTTTGCGCTTTTTTCTTTATTTTATTTTACATTTATCATCTTTAGAAATTTTCTCGGCATAAATGCGTGTTCTATTTTTTATTTTTACTCATCTTGATAGCAAAAAATGCCATTCCAATACAAAACCACATACCTATAATCGATAACCAAATAATACTCATAAAAGTACTCCTTTTTTGCAAACTTTATCATAAAAGATCCAAACGTTAAATGCCCTTTATTTTGAATTTTAAAGGGGGCATTTTAGACATGAAAAAATAGACCAAAACGTTTGGCAAGTTTGTATTTTTTTACGCCATATTAAAACCAAAAATGAAATCCTTAACCCCACTATAGAACCAATCATTCACTTTAAAAGAACGAGAACCTTTTCATCATTGCTCCAAAATTTAAAATCATGTTGTCAAAATGCAAATGAATTGTTCTACCATGTTCCATCATTTTATGCGTTCTTTTCTCGTGTCCAATAACATGAGTTACTCGCAATGCGTTTCTCAATCAATGAGTAAAGGATATAAAAATGGACAACAAGGACAAAACAAGAAATCATCAAGCTAACCTCATAAATCTCAAAATTAGCGGTTTGTTTTCTTGCTGTTGCTTTTGAAAGGAAAGCTCGCTCCTTTTTCCCTGCGCAAGTATTCAAACAGCTGAGAGAGCTTTTGAGAGCTTTTTAAAGGGAAAGGGGCATTTATAAGACAGGGCAAAAGCTTTTCGCTTAGAAACGACTCATAGCTTCTCTAAGAACTTTTCACTTTCGCCTGTCCTTTTATACCTTTTTGAGTCCAAAAACGCTTAGAAAGCAAATGAACCCCGT
AATTATAAAGCAAAAGATATAAATGCTTTATTTTATATCCCTTACTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATATCCCTTACTGTCCATTTTTATATCCCTTACCCCCGTTTCGCTCTTACGCGCTTAATGGATACAAAACTCCTAGCAGTATATCCTAGCAGTATATATTAGTAGTATATATTAGCAGTCTATCTTAGAGCGCGCGACACTCAAGCTATATAGATATGAAATTAAACAAATTAAATCTTAACAATTCCATTTTATTCAAATTTTTCTAAAGAAACTAGCTCTTTTGCCAGCTATCATTTATACTTTAAACCAATACTTTTAGAGTATTAAAAAAGCACAAAGAAGATTTTTTCGGTAGGTCTTCTTTGCGCTTTTTTCTTTATTTTATTTTACATTTATCATCTTTAGAAATTTTCTCGGCATAAATGCGTGTTCTATTTTTTATTTTTACTCATCTTGATAGCAAAAAATGCCATTCCAATACAAAACCACATACCTATAATCGATAACCAAATAATACTCATAAAAGTACTCCTTTTTTGCAAACTTTATCATAAAAGATCCAAACGTTAAATGCCCTTTATTTTGAATTTTAAAGGGGGCATTTTAGACATGAAAAAATAGACCAAAACGTTTGGCAAGTTTGTATTTTTTTACGCCATATTAAAACCAAAAATGAAATCCTTAACCCCACTATAGAACCAATCATTCACTTTAAAAGAACGAGAACCTTTTCATCATTGCTCCAAAATTTAAAATCATGTTGTCAAAATGCAAATGAATTGTTCTACCATGTTCCATCATTTTATGCGTTCTTTTCTCGTGTCCAATAACATGAGTTACTCGCAATGCGTTTCTCAATCAATGAGTAAAGGATATAAAAATGGACAACAAGGACAAAACAAGAAATCATCAAGCTAACCTCATAAATCTCAAAATTAGCGGTTTGTTTTCTTGCTGTTGCTTTTGAAAGGAAAGCTCGCTCCTTTTTCCCTGCGCAAGTATTCAAACAGCTGAGAGAGCTTTTGAGAGCTTTTTAAAGGGAAAGGGGCATTTATAAGACAGGGCAAAAGCTTTTCGCTTAGAAACGACTCATAGCTTCTCTAAGAACTTTTCACTTTCGCCTGTCCTTTTATACCTTTTTGAGTCCAAAAACGCTTAGAAAGCAAATGAACCCCGT
AT-rich region
The information of repeat sequences

Motif TTTTATATCCCTTRCTGTCC

StartP-valueSite
752.72e-12TGCTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATAT
532.72e-12TACTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATAT
979.66e-12TGCTGTCCATTTTTATATCCCTTACTGTCCATTTTTATAT
319.66e-12AAATGCTTTATTTTATATCCCTTACTGTCCATTTTTATAT
1199.84e-11TACTGTCCATTTTTATATCCCTTACCCCCGTTTCGCTCTT

Motif TTTTTAYWSCTTTTKAAAGSMAAAAAYGC

StartP-valueSite
10642.29e-13CTGAGAGAGCTTTTGAGAGCTTTTTAAAGGGAAAGGGGCATTTATAAGA
11701.80e-11TTCGCCTGTCCTTTTATACCTTTTTGAGTCCAAAAACGCTTAGAAAGCA
9951.97e-11GTTTGTTTTCTTGCTGTTGCTTTTGAAAGGAAAGCTCGCTCCTTTTTCC
4852.78e-11CTATTTTTTATTTTTACTCATCTTGATAGCAAAAAATGCCATTCCAATA
6911.66e-10AGTTTGTATTTTTTTACGCCATATTAAAACCAAAAATGAAATCCTTAAC

Motif TAGCAGTATAT

StartP-valueSite
1875.44e-07CAGTATATCCTAGCAGTATATATTAGTAGTA
1745.44e-07ACAAAACTCCTAGCAGTATATCCTAGCAGTA
2131.30e-06TAGTATATATTAGCAGTCTATCTTAGAGCGC
2003.71e-06CAGTATATATTAGTAGTATATATTAGCAGTC
9803.80e-06ATCTCAAAATTAGCGGTTTGTTTTCTTGCTG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000070 100.0 1220 0 0 1 1220 1 1220 0.0 2254
pORI00000070 100.0 35 0 0 97 131 31 65 1.97e-11 66
pORI00000070 100.0 35 0 0 31 65 97 131 1.97e-11 66
pORI00000121 99.918 1220 0 1 1 1220 1 1219 0.0 2246
pORI00000121 100.0 35 0 0 97 131 31 65 1.97e-11 66
pORI00000121 100.0 35 0 0 31 65 97 131 1.97e-11 66
pORI00000120 99.918 1220 0 1 1 1220 1 1219 0.0 2246
pORI00000120 100.0 35 0 0 97 131 31 65 1.97e-11 66
pORI00000120 100.0 35 0 0 31 65 97 131 1.97e-11 66
pORI00000267 98.18 934 10 6 290 1220 22 951 0.0 1624
pORI00000190 92.261 659 22 13 568 1216 643 4 0.0 907
pORI00000190 91.905 210 14 3 290 499 979 773 0.0 291
pORI00000266 91.566 664 27 13 562 1216 621 1264 0.0 889
pORI00000266 96.994 499 13 2 1 499 1 497 0.0 837
pORI00000266 98.246 57 1 0 31 87 75 131 5.41e-22 100
pORI00000266 100.0 35 0 0 97 131 31 65 1.97e-11 66
pORI00000266 100.0 35 0 0 31 65 97 131 1.97e-11 66
pORI00000189 91.566 664 27 13 562 1216 621 1264 0.0 889
pORI00000189 96.994 499 13 2 1 499 1 497 0.0 837
pORI00000189 98.246 57 1 0 31 87 75 131 5.41e-22 100
pORI00000189 100.0 35 0 0 97 131 31 65 1.97e-11 66
pORI00000189 100.0 35 0 0 31 65 97 131 1.97e-11 66
pORI00000148 88.67 203 18 5 449 649 279 478 0.0 243
pORI00000145 92.105 152 12 0 449 600 724 573 0.0 215
pORI00000230 88.158 152 18 0 449 600 753 602 0.0 182