RefSeq NC_015261
DoriC accession number pORI00000267
OriC length 1285 nt
OriC AT content 0.6755
The location of oriC region 21219..1272 nt
Browse in NCBI
OriC map
OriC sequences
AAGATAACTTAAAACAAATTTTTTTATCTAAAATTTCTAAAAAAACTAGCCTTTTTACCAGCTATCATTTATCATTTAAACCAATACTTTTAAAGTATTAAAAAAAAGCACAAAGAAGATTTTTTCGGTAGGTCTTCTTTGCGCTTTTTTCTTTATTTTATTTTACATTTATCATCTTTAGAAATTTTCTCGGCATAAATGCGTGTTCTATTTTTTATTTTTACTCATCTTGATAGCAAAAAAATGCCATTCCAATACAAAACCACATACCTATAATCGATAACCAAATAATACTCATAAAAGTACTCCTTTTTTGCAAACTTTATCATAAAAGATCCAAACGTTAAATGCCTTTATTTTGAATTTTAAAGGGGGCATTTTAGACATGAAAAAATAGACCAAAACGTTTGGCAAGTTTGTATTTTTTACGCCATATTAAAACCAAAAATGAAATCCTTAACCCCACTATAGAACCAATCATTCACTTTAAAAGAACGAGAACCTTTTCATCATTGCTCCAAAATTTAAAATCATGTTGTCAAAATGCAAATGAATTGTTCTACCATGTTCCATCATTTTATGCGTTCTTTTCTCGTGTCCAATAACATGAGTTACTCGCAATGCGTTTCTCAATCAATGAGTAAAGGATATAAAAATGGACAACAAGGACAAAACAAGAAATCATCAAGCTAACCTCATAAATCTCAAAATTAGCGGTTTGTTTTCTTGCTGTTGCTTTTGAAAGGAAAGCTCGCTCCTTTTTCCCTGCGCAAGTATTCAAACAGCTGAGAGAGCTTTTGAGAGCTTTTTAAGGGAAAGGGGCATTTATAAGACAGGGCAAAAGCTTTTCGCTTAGAAACGACTCATAGCTTCTCTAAGAACTTTTCACTTTCGCCTGTCCTTTTATACCTTTTTGAGTCCAAAAACGCTTAGAAAGCAAATGAACCCCGTTTATTGCTTATTATTCAGTTGTTGTTCTACATTCGCAAGAAAAGCTTGTTCGTTGCGTTCGTCTTCTTTTTGCCATTGCTCATTTAAAATATCGATTGCTATATCTGCAAATAAGTGCTTAAACGTGCCATAAAGATAGTTTTCCGTCGTGGTATGAATGGTATAGTCATCTTTTCGAATAGCATTAAAGAAACGTCGAATCGTATTTGTCATTTGTTGTTGATAGGTATCATGGTCTAAGAAGAAATGAACTTGCTTTTCTTTTTCCGTATCTTTTCGAGCATTCAAGATAATCCCAATAAACCGGTGTAATTCTTTTGGCGTATTGCACCAC
AAGATAACTTAAAACAAATTTTTTTATCTAAAATTTCTAAAAAAACTAGCCTTTTTACCAGCTATCATTTATCATTTAAACCAATACTTTTAAAGTATTAAAAAAAAGCACAAAGAAGATTTTTTCGGTAGGTCTTCTTTGCGCTTTTTTCTTTATTTTATTTTACATTTATCATCTTTAGAAATTTTCTCGGCATAAATGCGTGTTCTATTTTTTATTTTTACTCATCTTGATAGCAAAAAAATGCCATTCCAATACAAAACCACATACCTATAATCGATAACCAAATAATACTCATAAAAGTACTCCTTTTTTGCAAACTTTATCATAAAAGATCCAAACGTTAAATGCCTTTATTTTGAATTTTAAAGGGGGCATTTTAGACATGAAAAAATAGACCAAAACGTTTGGCAAGTTTGTATTTTTTACGCCATATTAAAACCAAAAATGAAATCCTTAACCCCACTATAGAACCAATCATTCACTTTAAAAGAACGAGAACCTTTTCATCATTGCTCCAAAATTTAAAATCATGTTGTCAAAATGCAAATGAATTGTTCTACCATGTTCCATCATTTTATGCGTTCTTTTCTCGTGTCCAATAACATGAGTTACTCGCAATGCGTTTCTCAATCAATGAGTAAAGGATATAAAAATGGACAACAAGGACAAAACAAGAAATCATCAAGCTAACCTCATAAATCTCAAAATTAGCGGTTTGTTTTCTTGCTGTTGCTTTTGAAAGGAAAGCTCGCTCCTTTTTCCCTGCGCAAGTATTCAAACAGCTGAGAGAGCTTTTGAGAGCTTTTTAAGGGAAAGGGGCATTTATAAGACAGGGCAAAAGCTTTTCGCTTAGAAACGACTCATAGCTTCTCTAAGAACTTTTCACTTTCGCCTGTCCTTTTATACCTTTTTGAGTCCAAAAACGCTTAGAAAGCAAATGAACCCCGTTTATTGCTTATTATTCAGTTGTTGTTCTACATTCGCAAGAAAAGCTTGTTCGTTGCGTTCGTCTTCTTTTTGCCATTGCTCATTTAAAATATCGATTGCTATATCTGCAAATAAGTGCTTAAACGTGCCATAAAGATAGTTTTCCGTCGTGGTATGAATGGTATAGTCATCTTTTCGAATAGCATTAAAGAAACGTCGAATCGTATTTGTCATTTGTTGTTGATAGGTATCATGGTCTAAGAAGAAATGAACTTGCTTTTCTTTTTCCGTATCTTTTCGAGCATTCAAGATAATCCCAATAAACCGGTGTAATTCTTTTGGCGTATTGCACCAC
AT-rich region
The information of repeat sequences

Motif TCGGTHBGTYTTCTTTBYGC

StartP-valueSite
1255.64e-12GAAGATTTTTTCGGTAGGTCTTCTTTGCGCTTTTTTCTTT
10051.24e-09GCTTGTTCGTTGCGTTCGTCTTCTTTTTGCCATTGCTCAT
7522.29e-09AAAGGAAAGCTCGCTCCTTTTTCCCTGCGCAAGTATTCAA
7143.86e-09CTCAAAATTAGCGGTTTGTTTTCTTGCTGTTGCTTTTGAA

Motif GGGGCA

StartP-valueSite
8192.47e-05TTAAGGGAAAGGGGCATTTATAAGAC
3722.47e-05AATTTTAAAGGGGGCATTTTAGACAT

Motif GCWWRGAAAGC

StartP-valueSite
9285.77e-07GTCCAAAAACGCTTAGAAAGCAAATGAACCC
7859.64e-07TATTCAAACAGCTGAGAGAGCTTTTGAGAGC
7413.72e-06TGTTGCTTTTGAAAGGAAAGCTCGCTCCTTT
9865.07e-06TTCTACATTCGCAAGAAAAGCTTGTTCGTTG
8519.13e-06AAAGCTTTTCGCTTAGAAACGACTCATAGCT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000267 100.0 1285 0 0 1 1285 1 1285 0.0 2374
pORI00000121 98.285 933 10 5 22 951 290 1219 0.0 1629
pORI00000120 98.285 933 10 5 22 951 290 1219 0.0 1629
pORI00000070 98.18 934 10 6 22 951 290 1220 0.0 1624
pORI00000190 92.097 658 22 13 302 947 643 4 0.0 900
pORI00000266 91.403 663 27 13 296 947 621 1264 0.0 881
pORI00000189 91.403 663 27 13 296 947 621 1264 0.0 881
pORI00000148 88.67 203 18 5 182 382 279 478 0.0 243
pORI00000145 91.503 153 12 1 182 334 724 573 0.0 209
pORI00000230 87.582 153 18 1 182 334 753 602 9.80909e-45 176