RefSeq NC_015257
DoriC accession number pORI00000190
OriC length 1000 nt
OriC AT content 0.684
The location of oriC region 1169..2168 nt
Browse in NCBI
OriC map
OriC sequences
ACAGGTCTCATTTGCTTTCTAAGCGTTTTTGGACTCAAAAAGGTATAAAAGGAAAAGGACAGGCGAAAGTGAAAAGTTCTTAGAGAAGCTATGAGTCGTTTCTAAGCGAAAAGCTTTTGACCCGTCCTATAAATGCCCCTTTCCCTTTAAAAAGCTCTCAAAAGCTCTCTCAGCTGTTTGAATACTTGCGCAGGGAAAAAGGAGCGAGCTTTCCTTTCAAAAGCAACAGCAAGAAAACAAACCGCTAATTTTGAGATTTATGGGGTTAGCTTGATGATTTCTTGTTTTGTCCTTGTTGTCCATTTTTATATCCTTTAATTATAGTTAGCAACTAATGTCATTGAACACGAGAAAAGAACGCATAAAATGATGGAACATGGTAGAACAATTCATTTGCATTTTAATAATATGGTTTATGAATTTTGAAACGATAGGGAAAGGTTCTCGTTCTTTTAAAGTGAATGATTGGTTCTATAGTGGGATTAGGGATTTTGTTTTTGGTTTTAATATGGCGTAAAAAAAATACAAACTTGCCAAACGTTTTGGTCTATTTTTTCATGTCTAAAATGCCCCTTTAAAATTCAAAATAAAGGCATTTAACGTTTGGATCTTTTATGATAAAGTTTGCTAAAAAAGGAGTACTAGTATGGCTAATTTTTCAAAAAAATATTCAAATACTTTTTCTTATATGCTTATTTTTGGTATAGCTTTATTTATATTTATGGGGCCATTAGGGGCAGGGATAGGAATAGCGATTGGAACTGCTGTTGGACAACATGAGGACAAGAAAAAATAGAACACGCATTTATGCCGAGAAAATTTCTAGAGATAATAAATGTAAAATAAAATAAAGAAAAAAGCGCAAAGAAGACCTACCGAAAAAATCTTCTTTGTGCTTTTTTAATACTCTAAAAGTATTGTCTAAAGTATAAATGATAAATTGCAAAAGTGCTAGTTTCTTTAGAAATTTTAGATAAAAAAATTTGTTTTAAGTTATCTT
ACAGGTCTCATTTGCTTTCTAAGCGTTTTTGGACTCAAAAAGGTATAAAAGGAAAAGGACAGGCGAAAGTGAAAAGTTCTTAGAGAAGCTATGAGTCGTTTCTAAGCGAAAAGCTTTTGACCCGTCCTATAAATGCCCCTTTCCCTTTAAAAAGCTCTCAAAAGCTCTCTCAGCTGTTTGAATACTTGCGCAGGGAAAAAGGAGCGAGCTTTCCTTTCAAAAGCAACAGCAAGAAAACAAACCGCTAATTTTGAGATTTATGGGGTTAGCTTGATGATTTCTTGTTTTGTCCTTGTTGTCCATTTTTATATCCTTTAATTATAGTTAGCAACTAATGTCATTGAACACGAGAAAAGAACGCATAAAATGATGGAACATGGTAGAACAATTCATTTGCATTTTAATAATATGGTTTATGAATTTTGAAACGATAGGGAAAGGTTCTCGTTCTTTTAAAGTGAATGATTGGTTCTATAGTGGGATTAGGGATTTTGTTTTTGGTTTTAATATGGCGTAAAAAAAATACAAACTTGCCAAACGTTTTGGTCTATTTTTTCATGTCTAAAATGCCCCTTTAAAATTCAAAATAAAGGCATTTAACGTTTGGATCTTTTATGATAAAGTTTGCTAAAAAAGGAGTACTAGTATGGCTAATTTTTCAAAAAAATATTCAAATACTTTTTCTTATATGCTTATTTTTGGTATAGCTTTATTTATATTTATGGGGCCATTAGGGGCAGGGATAGGAATAGCGATTGGAACTGCTGTTGGACAACATGAGGACAAGAAAAAATAGAACACGCATTTATGCCGAGAAAATTTCTAGAGATAATAAATGTAAAATAAAATAAAGAAAAAAGCGCAAAGAAGACCTACCGAAAAAATCTTCTTTGTGCTTTTTTAATACTCTAAAAGTATTGTCTAAAGTATAAATGATAAATTGCAAAAGTGCTAGTTTCTTTAGAAATTTTAGATAAAAAAATTTGTTTTAAGTTATCTT
AT-rich region
The information of repeat sequences

Motif YGTTTTTKGAYWWMAWAWGSWAWARAARRAAWASAAVHNKS

StartP-valueSite
241.20e-16GCTTTCTAAGCGTTTTTGGACTCAAAAAGGTATAAAAGGAAAAGGACAGGCGAAAGTGAAA
7636.32e-16CGATTGGAACTGCTGTTGGACAACATGAGGACAAGAAAAAATAGAACACGCATTTATGCCG
2058.78e-15GAAAAAGGAGCGAGCTTTCCTTTCAAAAGCAACAGCAAGAAAACAAACCGCTAATTTTGAG
4931.00e-13TTAGGGATTTTGTTTTTGGTTTTAATATGGCGTAAAAAAAATACAAACTTGCCAAACGTTT
6096.07e-12AACGTTTGGATCTTTTATGATAAAGTTTGCTAAAAAAGGAGTACTAGTATGGCTAATTTTT

Motif TGCCCC

StartP-valueSite
5681.88e-05ATGTCTAAAATGCCCCTTTAAAATTC
1341.88e-05GTCCTATAAATGCCCCTTTCCCTTTA

Motif GSGCAGGG

StartP-valueSite
1881.28e-06TTGAATACTTGCGCAGGGAAAAAGGAGC
7353.06e-06GGGCCATTAGGGGCAGGGATAGGAATAG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000190 100.0 1000 0 0 1 1000 1 1000 0.0 1847
pORI00000266 99.082 980 6 3 1 979 1267 290 0.0 1757
pORI00000189 99.082 980 6 3 1 979 1267 290 0.0 1757
pORI00000121 92.169 664 24 12 4 649 1215 562 0.0 913
pORI00000121 91.905 210 14 3 773 979 499 290 0.0 291
pORI00000120 92.169 664 24 12 4 649 1215 562 0.0 913
pORI00000120 91.905 210 14 3 773 979 499 290 0.0 291
pORI00000070 92.03 665 24 13 4 649 1216 562 0.0 907
pORI00000070 91.905 210 14 3 773 979 499 290 0.0 291
pORI00000267 91.867 664 24 13 4 649 947 296 0.0 900
pORI00000267 90.948 232 17 3 773 1000 232 1 0.0 309
pORI00000203 91.489 47 4 0 776 822 665 711 1.61e-11 66
pORI00000145 97.368 38 1 0 785 822 687 724 1.61e-11 66
pORI00000206 94.595 37 2 0 786 822 645 681 2.69e-09 58
pORI00000024 94.595 37 2 0 786 822 632 668 2.69e-09 58
pORI00000036 100.0 29 0 0 794 822 263 291 3.49e-08 55
pORI00000274 100.0 28 0 0 795 822 401 428 1.25e-07 53