RefSeq NC_015260
DoriC accession number pORI00000266
OriC length 1267 nt
OriC AT content 0.6796
The location of oriC region 1096..2362 nt
Browse in NCBI
OriC map
OriC sequences
AATTATAAAGCAAAAGATATAAATGCTTTATTTTATATCCCTTACTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATATCCCTTACTGTCCATTTTTATATCCCTTACTGTCCATTTTTATATCCCTTACCCCCGTTTCGCTCTTACGCGCTTAATGGATACAAAACTCCTAGCAGTATATCCTAGCAGTATATATTAGTAGTATATATTAGCAGTCTATCTTAGAGCGCGCGACACTCAAGCTATATAGATATGAAATTAAACAAATTAAATCTTAACAATTCCATTTTATTCAAATTTTTCTAAAGAAACTAGCACTTTTGCAATTTATCATTTATACTTTAGACAATACTTTTAGAGTATAAAAAAAGCACAAAGAAGATTTTTTCGGTAGGTCTTCTTTGCGCTTTTTTCTTTATTTTATTTTACATTTATTATCTCTAGAAATTTTCTCGGCATAAATGCGTGTTCTATTTTTTCTTGTCCTCATGTTGTCCAACAGCAGTTCCAATCGCTATTCCTATCCCTGCCCCTAATGGCCCCATAAATATAAATAAAGCTATACCAAAAATAAGCATATAAGAAAAAGTATTTGAATATTTTTTTGAAAAATTAGCCATACTAGTACTCCTTTTTAGCAAACTTTATCATAAAAGATCCAAACGTTAAATGCCTTTATTTTGAATTTTAAAGGGGCATTTTAGACATGAAAAAATAGACCAAAACGTTTGGCAAGTTTGTATTTTTTTTACGCCATATTAAAACCAAAAACAAAATCCCTAATCCCACTATAGAACCAATCATTCACTTTAAAAGAACGAGAACCTTTCCCTATCGTTTCAAAATTCATAAACCATATTATTAAAATGCAAATGAATTGTTCTACCATGTTCCATCATTTTATGCGTTCTTTTCTCGCGTTCAATGACATTAGTTGCTAACTATAATTAAAGGATATAAAAATGGACAACAAGGACAAAACAAGAAATCATCAAGCTAACCCCATAAATCTCAAAATTAGCGGTTTGTTTTCTTGCTGTTGCTTTTGAAAGGAAAGCTCGCTCCTTTTCCTTGCGCAAGTATTCAAACAGCTGAGAGAGCTTTTGAGAGCTTTTTAAAGGGAAAGGGGCATTTATAGGACGGGTCAAAAGCTTTTCGCTTAGAAACGACTCATAGCTTCTCTAAGAACTTTTCACTTTCGCCTGTCCTTTTCCTTTTATACCTTTTTGAGTCCAAAAACGCTTAGAAAGCAAATGAGACCTGT
AATTATAAAGCAAAAGATATAAATGCTTTATTTTATATCCCTTACTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATATCCCTTACTGTCCATTTTTATATCCCTTACTGTCCATTTTTATATCCCTTACCCCCGTTTCGCTCTTACGCGCTTAATGGATACAAAACTCCTAGCAGTATATCCTAGCAGTATATATTAGTAGTATATATTAGCAGTCTATCTTAGAGCGCGCGACACTCAAGCTATATAGATATGAAATTAAACAAATTAAATCTTAACAATTCCATTTTATTCAAATTTTTCTAAAGAAACTAGCACTTTTGCAATTTATCATTTATACTTTAGACAATACTTTTAGAGTATAAAAAAAGCACAAAGAAGATTTTTTCGGTAGGTCTTCTTTGCGCTTTTTTCTTTATTTTATTTTACATTTATTATCTCTAGAAATTTTCTCGGCATAAATGCGTGTTCTATTTTTTCTTGTCCTCATGTTGTCCAACAGCAGTTCCAATCGCTATTCCTATCCCTGCCCCTAATGGCCCCATAAATATAAATAAAGCTATACCAAAAATAAGCATATAAGAAAAAGTATTTGAATATTTTTTTGAAAAATTAGCCATACTAGTACTCCTTTTTAGCAAACTTTATCATAAAAGATCCAAACGTTAAATGCCTTTATTTTGAATTTTAAAGGGGCATTTTAGACATGAAAAAATAGACCAAAACGTTTGGCAAGTTTGTATTTTTTTTACGCCATATTAAAACCAAAAACAAAATCCCTAATCCCACTATAGAACCAATCATTCACTTTAAAAGAACGAGAACCTTTCCCTATCGTTTCAAAATTCATAAACCATATTATTAAAATGCAAATGAATTGTTCTACCATGTTCCATCATTTTATGCGTTCTTTTCTCGCGTTCAATGACATTAGTTGCTAACTATAATTAAAGGATATAAAAATGGACAACAAGGACAAAACAAGAAATCATCAAGCTAACCCCATAAATCTCAAAATTAGCGGTTTGTTTTCTTGCTGTTGCTTTTGAAAGGAAAGCTCGCTCCTTTTCCTTGCGCAAGTATTCAAACAGCTGAGAGAGCTTTTGAGAGCTTTTTAAAGGGAAAGGGGCATTTATAGGACGGGTCAAAAGCTTTTCGCTTAGAAACGACTCATAGCTTCTCTAAGAACTTTTCACTTTCGCCTGTCCTTTTCCTTTTATACCTTTTTGAGTCCAAAAACGCTTAGAAAGCAAATGAGACCTGT
AT-rich region
The information of repeat sequences

Motif TTTTATATCCCTTACTGTCC

StartP-valueSite
977.18e-12TACTGTCCATTTTTATATCCCTTACTGTCCATTTTTATAT
757.18e-12TGCTGTCCATTTTTATATCCCTTACTGTCCATTTTTATAT
317.18e-12AAATGCTTTATTTTATATCCCTTACTGTCCATTTTTATAT
539.99e-12TACTGTCCATTTTTATATCCCTTGCTGTCCATTTTTATAT
1199.93e-11TACTGTCCATTTTTATATCCCTTACCCCCGTTTCGCTCTT

Motif SMGBKTTSTWTTYTTTYTABWSCTTWTKAARDSCAAAADCRC

StartP-valueSite
10244.14e-17CTCAAAATTAGCGGTTTGTTTTCTTGCTGTTGCTTTTGAAAGGAAAGCTCGCTCCTTTTCCT
12047.46e-16TTTCACTTTCGCCTGTCCTTTTCCTTTTATACCTTTTTGAGTCCAAAAACGCTTAGAAAGCA
10928.98e-15AGTATTCAAACAGCTGAGAGAGCTTTTGAGAGCTTTTTAAAGGGAAAGGGGCATTTATAGGA
4671.85e-14CGGCATAAATGCGTGTTCTATTTTTTCTTGTCCTCATGTTGTCCAACAGCAGTTCCAATCGC
7362.49e-13AAACGTTTGGCAAGTTTGTATTTTTTTTACGCCATATTAAAACCAAAAACAAAATCCCTAAT

Motif TAGCAGTATAT

StartP-valueSite
1875.48e-07CAGTATATCCTAGCAGTATATATTAGTAGTA
1745.48e-07ACAAAACTCCTAGCAGTATATCCTAGCAGTA
2138.75e-07TAGTATATATTAGCAGTCTATCTTAGAGCGC
2001.88e-06CAGTATATATTAGTAGTATATATTAGCAGTC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000266 100.0 1267 0 0 1 1267 1 1267 0.0 2340
pORI00000266 98.305 59 1 0 75 133 31 89 4.34e-23 104
pORI00000266 98.305 59 1 0 31 89 75 133 4.34e-23 104
pORI00000266 100.0 35 0 0 97 131 31 65 2.05e-11 66
pORI00000266 100.0 35 0 0 31 65 97 131 2.05e-11 66
pORI00000189 100.0 1267 0 0 1 1267 1 1267 0.0 2340
pORI00000189 98.305 59 1 0 75 133 31 89 4.34e-23 104
pORI00000189 98.305 59 1 0 31 89 75 133 4.34e-23 104
pORI00000189 100.0 35 0 0 97 131 31 65 2.05e-11 66
pORI00000189 100.0 35 0 0 31 65 97 131 2.05e-11 66
pORI00000190 99.082 980 6 3 290 1267 979 1 0.0 1757
pORI00000121 91.704 663 27 12 621 1264 562 1215 0.0 894
pORI00000121 96.994 499 13 2 1 497 1 499 0.0 837
pORI00000121 98.246 57 1 0 75 131 31 87 5.62e-22 100
pORI00000121 100.0 35 0 0 97 131 31 65 2.05e-11 66
pORI00000121 100.0 35 0 0 31 65 97 131 2.05e-11 66
pORI00000120 91.704 663 27 12 621 1264 562 1215 0.0 894
pORI00000120 96.994 499 13 2 1 497 1 499 0.0 837
pORI00000120 98.246 57 1 0 75 131 31 87 5.62e-22 100
pORI00000120 100.0 35 0 0 97 131 31 65 2.05e-11 66
pORI00000120 100.0 35 0 0 31 65 97 131 2.05e-11 66
pORI00000070 91.566 664 27 13 621 1264 562 1216 0.0 889
pORI00000070 96.994 499 13 2 1 497 1 499 0.0 837
pORI00000070 98.246 57 1 0 75 131 31 87 5.62e-22 100
pORI00000070 100.0 35 0 0 97 131 31 65 2.05e-11 66
pORI00000070 100.0 35 0 0 31 65 97 131 2.05e-11 66
pORI00000267 91.403 663 27 13 621 1264 296 947 0.0 881
pORI00000267 88.208 212 20 4 290 497 22 232 0.0 248
pORI00000203 91.489 47 4 0 448 494 711 665 2.05e-11 66
pORI00000145 97.368 38 1 0 448 485 724 687 2.05e-11 66
pORI00000206 94.595 37 2 0 448 484 681 645 3.43e-09 58
pORI00000024 94.595 37 2 0 448 484 668 632 3.43e-09 58
pORI00000036 100.0 29 0 0 448 476 291 263 4.44e-08 55
pORI00000274 100.0 28 0 0 448 475 428 401 1.6e-07 53