RefSeq NZ_CP015520.1
DoriC accession number aORI10010389
OriC length 678 nt
OriC AT content 0.3525
The location of oriC region 721105..721782 nt
Browse in NCBI
OriC map
OriC sequences
GTTGTACACTATCGTTGGCAGGTTTAAAAAAGTATCATTAATGCTTTGTGGTGTCCAGTAATGGAGTTAGATTTCCACTGGAAACAAAGGTCTTTTTCGATGATTATTTGAAAGACCCCCCAGAGTTTCATTTCCACTGGAACCCAATTTTGGAGAATGGATGGATTACATGCCCGAAAAAACAGAAAGCTCCATTTATAAAGAACATTACAAACATAAAATCAACAGATTTTAAATCTGCTCTTTGAATATTTAGACTAATTTTCATGATCTTTATGAGTTTGAGATTTTTTTATGAACATTGTTCATGAAAAAATATAAATATTGGTAATTGTAAAAAGAACGGGAGAGTTTCACCAAAGATCAAGGGATAATATGGGAGTAGCCAAAGTCCGCCTCCACTGGAAACAGAACTCTGGGGGACTACGAAACCGTTTAATGTTCTGTCTTGTGTTTAGTATATATGTTTACCAAAATAGTACGATTTGGAGCATTAGTGTACATTATTTTCTGCCCAAAAATGTTCATTCTGCTTTCAGTGGAAATGCCCACTTGGATGCTATTGTTCATTTTCGAATGTAAATGTTTGATGCACTATTATGTTCTTTGACTCCTTCAGTTTCCGCTGGAACGATACCGTTATTAAGTTTCGAATCGAAAGTTCCCTTGGTGATTCCA
GTTGTACACTATCGTTGGCAGGTTTAAAAAAGTATCATTAATGCTTTGTGGTGTCCAGTAATGGAGTTAGATTTCCACTGGAAACAAAGGTCTTTTTCGATGATTATTTGAAAGACCCCCCAGAGTTTCATTTCCACTGGAACCCAATTTTGGAGAATGGATGGATTACATGCCCGAAAAAACAGAAAGCTCCATTTATAAAGAACATTACAAACATAAAATCAACAGATTTTAAATCTGCTCTTTGAATATTTAGACTAATTTTCATGATCTTTATGAGTTTGAGATTTTTTTATGAACATTGTTCATGAAAAAATATAAATATTGGTAATTGTAAAAAGAACGGGAGAGTTTCACCAAAGATCAAGGGATAATATGGGAGTAGCCAAAGTCCGCCTCCACTGGAAACAGAACTCTGGGGGACTACGAAACCGTTTAATGTTCTGTCTTGTGTTTAGTATATATGTTTACCAAAATAGTACGATTTGGAGCATTAGTGTACATTATTTTCTGCCCAAAAATGTTCATTCTGCTTTCAGTGGAAATGCCCACTTGGATGCTATTGTTCATTTTCGAATGTAAATGTTTGATGCACTATTATGTTCTTTGACTCCTTCAGTTTCCGCTGGAACGATACCGTTATTAAGTTTCGAATCGAAAGTTCCCTTGGTGATTCCA
GTTGTACACTATCGTTGGCAGGTTTAAAAAAGTATCATTAATGCTTTGTGGTGTCCAGTAATGGAGTTAGATTTCCACTGGAAACAAAGGTCTTTTTCGATGATTATTTGAAAGACCCCCCAGAGTTTCATTTCCACTGGAACCCAATTTTGGAGAATGGATGGATTACATGCCCGAAAAAACAGAAAGCTCCATTTATAAAGAACATTACAAACATAAAATCAACAGATTTTAAATCTGCTCTTTGAATATTTAGACTAATTTTCATGATCTTTATGAGTTTGAGATTTTTTTATGAACATTGTTCATGAAAAAATATAAATATTGGTAATTGTAAAAAGAACGGGAGAGTTTCACCAAAGATCAAGGGATAATATGGGAGTAGCCAAAGTCCGCCTCCACTGGAAACAGAACTCTGGGGGACTACGAAACCGTTTAATGTTCTGTCTTGTGTTTAGTATATATGTTTACCAAAATAGTACGATTTGGAGCATTAGTGTACATTATTTTCTGCCCAAAAATGTTCATTCTGCTTTCAGTGGAAATGCCCACTTGGATGCTATTGTTCATTTTCGAATGTAAATGTTTGATGCACTATTATGTTCTTTGACTCCTTCAGTTTCCGCTGGAACGATACCGTTATTAAGTTTCGAATCGAAAGTTCCCTTGGTGATTCCA
ORB     AT-rich region
The information of repeat sequences

Motif RTTTCCACTGGAAMS

StartP-valueSite
1303.43e-09CCAGAGTTTCATTTCCACTGGAACCCAATTTTGGA
714.72e-09ATGGAGTTAGATTTCCACTGGAAACAAAGGTCTTT
6196.83e-09GACTCCTTCAGTTTCCGCTGGAACGATACCGTTAT
3958.49e-09GCCAAAGTCCGCCTCCACTGGAAACAGAACTCTGG
6471.56e-07CCGTTATTAAGTTTCGAATCGAAAGTTCCCTTGGT

Motif MTGCCC

StartP-valueSite
5458.68e-05TTCAGTGGAAATGCCCACTTGGATGC
1708.68e-05GATGGATTACATGCCCGAAAAAACAG
5111.33e-04ACATTATTTTCTGCCCAAAAATGTTC

Motif GACYCC

StartP-valueSite
1144.22e-05TTATTTGAAAGACCCCCCAGAGTTTC
6091.29e-04TATGTTCTTTGACTCCTTCAGTTTCC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010389 100.0 678 0 0 1 678 1 678 0.0 1253
aORI10010057 96.46 678 23 1 1 678 677 1 0.0 1118
aORI10010387 73.992 496 92 29 72 550 649 174 8.39378e-43 167
aORI10010388 75.758 363 64 21 72 422 614 264 3.89995e-41 161
aORI10010394 75.138 362 68 18 72 422 614 264 8.45e-38 150
aORI10010386 88.298 94 10 1 72 165 615 523 3.99e-26 111
aORI10010374 88.889 90 10 0 72 161 88 177 3.99e-26 111
aORI10010021 72.868 387 72 27 69 438 70 440 2.4e-23 102
aORI10010078 91.667 72 6 0 73 144 779 708 8.63e-23 100
aORI10010395 90.411 73 7 0 72 144 614 542 1.12e-21 97
aORI10010377 84.375 96 15 0 72 167 614 519 4.02e-21 95
aORI10010377 94.872 39 2 0 116 154 260 298 4.07e-11 62
aORI10010301 84.375 96 15 0 72 167 837 742 4.02e-21 95
aORI10010301 77.852 149 23 9 296 438 613 469 8.69e-18 84
aORI10010108 90.141 71 7 0 74 144 841 771 1.44e-20 94
aORI10010304 87.5 72 9 0 73 144 833 762 8.69e-18 84
aORI10010303 87.5 72 7 2 74 144 80 150 3.13e-17 82
aORI10010262 88.462 52 4 2 117 167 171 221 4.07e-11 62
aORI10010105 95.0 40 0 2 105 143 26 64 4.07e-11 62
aORI10010105 100.0 30 0 0 115 144 344 315 1.9e-09 57
aORI10010186 88.0 50 6 0 95 144 798 749 1.47e-10 60
aORI10010016 88.0 50 6 0 95 144 84 133 1.47e-10 60
aORI10010079 100.0 30 0 0 115 144 489 460 1.9e-09 57
aORI10010369 92.308 39 2 1 105 143 135 172 6.82e-09 55
aORI10010295 100.0 29 0 0 115 143 348 320 6.82e-09 55
aORI10010121 100.0 29 0 0 115 143 399 371 6.82e-09 55