RefSeq NC_012804.1
DoriC accession number aORI10010078
OriC length 853 nt
OriC AT content 0.6014
The location of oriC region 126739..127591 nt
Browse in NCBI
OriC map
OriC sequences
ATCTGATTTTCATACATTATTGGCACATTTTAATGAGACATCATGACATTATACCCACAAACTTCCTAAATATTGGGCGAATGCTACAGTACTTTCCACCCGAAGCACCGGACACAGTGGAAAGCTAACCAATCTACGATGAGGGGTTTATAGCCTTTGCTTGTCAGGAACCTGTTCAAACGAGAGGGAAGTTTCCACTGGATAGGCAAGATGTTCCAAAGGAAACGGGAACTCCGGATGACCATAAATGGACATCAAACTATACAAACGTAAAGTGAACGAAGCGGTGCGTTCTGAATTTCCACTGAAAGAAAAATGAACAAAAATGGCTATCAGCTTTAGTTCATCAATGTATTGTTTTGAGCAAGTGAGATAAGTGAAAACAGTTAAAATTCCAAGATAGTTAAATGAACTTGTAGTCCCCCAGGGTTTTGTTTCCACTGGAACCGGGGAAAGGCTACGCCTATCTTTTCTTCGTAGTTTTGGTGAAAACACTCCCATTTTTTCTACGTCTTGAGCTTTTAATCTTTTGCATGAACAATGTTCAGACTATACCCGATAGTTTAAAAGAATATGAAGAATATCTGGACATGTTCAAATTAAATTCAAAAGCAAGCTGAACAGTATATCATTTACGTACTAAAAACCCCAACCAAAACGACTTTTTCAAATGCAATGCCCCTTTAACCCGTCCATTTCCGTATCCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATAACGATCGAAAAAGACCTTTGTTTCCACTGGAACTAAATGTTCACTAGGGCTCATCCCGGGGGTGTGGTGTATCAACGTTTTTAAGCTCTCTTCTCGATTTCACTAC
ATCTGATTTTCATACATTATTGGCACATTTTAATGAGACATCATGACATTATACCCACAAACTTCCTAAATATTGGGCGAATGCTACAGTACTTTCCACCCGAAGCACCGGACACAGTGGAAAGCTAACCAATCTACGATGAGGGGTTTATAGCCTTTGCTTGTCAGGAACCTGTTCAAACGAGAGGGAAGTTTCCACTGGATAGGCAAGATGTTCCAAAGGAAACGGGAACTCCGGATGACCATAAATGGACATCAAACTATACAAACGTAAAGTGAACGAAGCGGTGCGTTCTGAATTTCCACTGAAAGAAAAATGAACAAAAATGGCTATCAGCTTTAGTTCATCAATGTATTGTTTTGAGCAAGTGAGATAAGTGAAAACAGTTAAAATTCCAAGATAGTTAAATGAACTTGTAGTCCCCCAGGGTTTTGTTTCCACTGGAACCGGGGAAAGGCTACGCCTATCTTTTCTTCGTAGTTTTGGTGAAAACACTCCCATTTTTTCTACGTCTTGAGCTTTTAATCTTTTGCATGAACAATGTTCAGACTATACCCGATAGTTTAAAAGAATATGAAGAATATCTGGACATGTTCAAATTAAATTCAAAAGCAAGCTGAACAGTATATCATTTACGTACTAAAAACCCCAACCAAAACGACTTTTTCAAATGCAATGCCCCTTTAACCCGTCCATTTCCGTATCCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATAACGATCGAAAAAGACCTTTGTTTCCACTGGAACTAAATGTTCACTAGGGCTCATCCCGGGGGTGTGGTGTATCAACGTTTTTAAGCTCTCTTCTCGATTTCACTAC
ATCTGATTTTCATACATTATTGGCACATTTTAATGAGACATCATGACATTATACCCACAAACTTCCTAAATATTGGGCGAATGCTACAGTACTTTCCACCCGAAGCACCGGACACAGTGGAAAGCTAACCAATCTACGATGAGGGGTTTATAGCCTTTGCTTGTCAGGAACCTGTTCAAACGAGAGGGAAGTTTCCACTGGATAGGCAAGATGTTCCAAAGGAAACGGGAACTCCGGATGACCATAAATGGACATCAAACTATACAAACGTAAAGTGAACGAAGCGGTGCGTTCTGAATTTCCACTGAAAGAAAAATGAACAAAAATGGCTATCAGCTTTAGTTCATCAATGTATTGTTTTGAGCAAGTGAGATAAGTGAAAACAGTTAAAATTCCAAGATAGTTAAATGAACTTGTAGTCCCCCAGGGTTTTGTTTCCACTGGAACCGGGGAAAGGCTACGCCTATCTTTTCTTCGTAGTTTTGGTGAAAACACTCCCATTTTTTCTACGTCTTGAGCTTTTAATCTTTTGCATGAACAATGTTCAGACTATACCCGATAGTTTAAAAGAATATGAAGAATATCTGGACATGTTCAAATTAAATTCAAAAGCAAGCTGAACAGTATATCATTTACGTACTAAAAACCCCAACCAAAACGACTTTTTCAAATGCAATGCCCCTTTAACCCGTCCATTTCCGTATCCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATAACGATCGAAAAAGACCTTTGTTTCCACTGGAACTAAATGTTCACTAGGGCTCATCCCGGGGGTGTGGTGTATCAACGTTTTTAAGCTCTCTTCTCGATTTCACTAC
ORB     AT-rich region
The information of repeat sequences

Motif GTTTCCACTGGA

StartP-valueSite
7674.27e-08AAAGACCTTTGTTTCCACTGGAACTAAATGTT
4344.27e-08CCAGGGTTTTGTTTCCACTGGAACCGGGGAAA
1914.27e-08CGAGAGGGAAGTTTCCACTGGATAGGCAAGAT
7082.77e-07TCCGTATCCCGGTTCCAGTGGAAATGAAACTC
2986.12e-07TGCGTTCTGAATTTCCACTGAAAGAAAAATGA

Motif SRACHTGTTCAAAHGNAA

StartP-valueSite
1682.61e-09TGCTTGTCAGGAACCTGTTCAAACGAGAGGGAAGTTTC
5872.88e-08AAGAATATCTGGACATGTTCAAATTAAATTCAAAAGCA
6593.78e-08CCAACCAAAACGACTTTTTCAAATGCAATGCCCCTTTA
2078.96e-08ACTGGATAGGCAAGATGTTCCAAAGGAAACGGGAACTC
2562.76e-07AAATGGACATCAAACTATACAAACGTAAAGTGAACGAA

Motif CCGGGG

StartP-valueSite
8035.95e-05AGGGCTCATCCCGGGGGTGTGGTGTA
4475.95e-05TCCACTGGAACCGGGGAAAGGCTACG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010078 100.0 853 0 0 1 853 1 853 0.0 1576
aORI10010108 84.783 828 108 18 35 853 98 916 0.0 815
aORI10010373 78.261 460 90 10 93 547 158 612 0.0 287
aORI10010395 89.474 95 9 1 686 779 519 613 3.02e-28 119
aORI10010374 92.683 82 5 1 708 789 160 80 1.08e-27 117
aORI10010386 94.521 73 2 2 708 779 543 614 5.05e-26 111
aORI10010387 87.912 91 11 0 689 779 558 648 6.53e-25 108
aORI10010377 87.368 95 11 1 686 779 519 613 6.53e-25 108
aORI10010377 100.0 30 0 0 707 736 289 260 2.4e-09 57
aORI10010304 86.316 95 13 0 685 779 739 833 8.45e-24 104
aORI10010389 91.667 72 6 0 708 779 144 73 1.09e-22 100
aORI10010057 91.667 72 6 0 708 779 534 605 1.09e-22 100
aORI10010394 90.278 72 7 0 708 779 542 613 5.08e-21 95
aORI10010388 90.411 73 5 2 708 779 542 613 5.08e-21 95
aORI10010301 90.278 72 7 0 708 779 765 836 5.08e-21 95
aORI10010303 82.609 92 13 3 689 778 170 80 5.12e-16 79
aORI10010105 93.023 43 2 1 701 743 72 31 5.16e-11 62
aORI10010105 100.0 32 0 0 706 737 313 344 1.85e-10 60
aORI10010186 87.037 54 5 2 705 757 746 798 1.85e-10 60
aORI10010016 88.235 51 4 2 708 757 133 84 1.85e-10 60
aORI10010302 79.348 92 11 7 420 507 783 696 6.67e-10 58
aORI10010369 96.97 33 1 0 705 737 176 144 2.4e-09 57
aORI10010079 100.0 30 0 0 708 737 460 489 2.4e-09 57
aORI10010295 100.0 29 0 0 709 737 320 348 8.63e-09 55
aORI10010262 87.5 48 5 1 689 735 218 171 8.63e-09 55
aORI10010121 96.97 33 0 1 706 737 367 399 8.63e-09 55