RefSeq NC_018092.1
DoriC accession number aORI10010186
OriC length 881 nt
OriC AT content 0.6822
The location of oriC region 1479769..1480649 nt
Browse in NCBI
OriC map
OriC sequences
TGATGACCCTCCATTGGAAATTGTGCTCCTAGATTATTATAGATCAATTTTCCAGAGGAAACATAACACATGTTGTTAATTTTTCCCCCATCCATATAACTAAATGTAATAATTTAGTTATGATAAATGCCATAGATATATAGTATCTCCATTGGAAATAGAGGAAACATTGGAAAGGCAACTATTCCTTTAACTGTTGAGTTTTTATCCTTTGCTTGACAAAAACATGTCAATATTTTCCAGTGGAAGTTCCACACCCAGCCCAAAACTTCCACAGGAAATGAGATAAGCGAATGAACATCTTTGGACATTTGATGTTTACATATTTCTACAGGAACTTCAGATTTCCTGTGGAGACAAAATGAACATTTATGGTCATTAAAATTTGTTCATTATTGCACCTTTTAGTTCATTAGATTAATCTAATTTGTTTAACATTTTCCAATTATTAAACAGAAGTGAAGTCCCCCAGAGTTTCATTTCCACTGGAGCCGGGCGGCAAACACCAGAAAAAATAAATTTTTTCTGGTGACAAACACTCTCCCATATTAAGTAGACTGCATATTTAAATATTTTTCTTTGAACGTATTTATAACAGAAAGCAGAAAATAATGAAAGTTTTTTCATTTTTTTACAAGTTATTATGGCTAATTACTGAATAAATGTTCATTAGATAAATGTAAAATTCTTTATAAGTTTTGCGTTGGCTTATGTAATACTCGTGAAAATTGCTTACCTTTCAAAACCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTTTTTAAGATCAACATAGAAACGTTTCTATATTTTGCTGAAAAATTTAGCATCCCAGGTGGTTTGCAGCTACAAAGTTACAAAGTAAATAGGAGATAAAAAAGT
TGATGACCCTCCATTGGAAATTGTGCTCCTAGATTATTATAGATCAATTTTCCAGAGGAAACATAACACATGTTGTTAATTTTTCCCCCATCCATATAACTAAATGTAATAATTTAGTTATGATAAATGCCATAGATATATAGTATCTCCATTGGAAATAGAGGAAACATTGGAAAGGCAACTATTCCTTTAACTGTTGAGTTTTTATCCTTTGCTTGACAAAAACATGTCAATATTTTCCAGTGGAAGTTCCACACCCAGCCCAAAACTTCCACAGGAAATGAGATAAGCGAATGAACATCTTTGGACATTTGATGTTTACATATTTCTACAGGAACTTCAGATTTCCTGTGGAGACAAAATGAACATTTATGGTCATTAAAATTTGTTCATTATTGCACCTTTTAGTTCATTAGATTAATCTAATTTGTTTAACATTTTCCAATTATTAAACAGAAGTGAAGTCCCCCAGAGTTTCATTTCCACTGGAGCCGGGCGGCAAACACCAGAAAAAATAAATTTTTTCTGGTGACAAACACTCTCCCATATTAAGTAGACTGCATATTTAAATATTTTTCTTTGAACGTATTTATAACAGAAAGCAGAAAATAATGAAAGTTTTTTCATTTTTTTACAAGTTATTATGGCTAATTACTGAATAAATGTTCATTAGATAAATGTAAAATTCTTTATAAGTTTTGCGTTGGCTTATGTAATACTCGTGAAAATTGCTTACCTTTCAAAACCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTTTTTAAGATCAACATAGAAACGTTTCTATATTTTGCTGAAAAATTTAGCATCCCAGGTGGTTTGCAGCTACAAAGTTACAAAGTAAATAGGAGATAAAAAAGT
TGATGACCCTCCATTGGAAATTGTGCTCCTAGATTATTATAGATCAATTTTCCAGAGGAAACATAACACATGTTGTTAATTTTTCCCCCATCCATATAACTAAATGTAATAATTTAGTTATGATAAATGCCATAGATATATAGTATCTCCATTGGAAATAGAGGAAACATTGGAAAGGCAACTATTCCTTTAACTGTTGAGTTTTTATCCTTTGCTTGACAAAAACATGTCAATATTTTCCAGTGGAAGTTCCACACCCAGCCCAAAACTTCCACAGGAAATGAGATAAGCGAATGAACATCTTTGGACATTTGATGTTTACATATTTCTACAGGAACTTCAGATTTCCTGTGGAGACAAAATGAACATTTATGGTCATTAAAATTTGTTCATTATTGCACCTTTTAGTTCATTAGATTAATCTAATTTGTTTAACATTTTCCAATTATTAAACAGAAGTGAAGTCCCCCAGAGTTTCATTTCCACTGGAGCCGGGCGGCAAACACCAGAAAAAATAAATTTTTTCTGGTGACAAACACTCTCCCATATTAAGTAGACTGCATATTTAAATATTTTTCTTTGAACGTATTTATAACAGAAAGCAGAAAATAATGAAAGTTTTTTCATTTTTTTACAAGTTATTATGGCTAATTACTGAATAAATGTTCATTAGATAAATGTAAAATTCTTTATAAGTTTTGCGTTGGCTTATGTAATACTCGTGAAAATTGCTTACCTTTCAAAACCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTTTTTAAGATCAACATAGAAACGTTTCTATATTTTGCTGAAAAATTTAGCATCCCAGGTGGTTTGCAGCTACAAAGTTACAAAGTAAATAGGAGATAAAAAAGT
ORB     AT-rich region
The information of repeat sequences

Motif YTCCAKTGGAAATWNARCWCHYRK

StartP-valueSite
2382.25e-12TGTCAATATTTTCCAGTGGAAGTTCCACACCCAGCCCAAAACTT
91.17e-11TGATGACCCTCCATTGGAAATTGTGCTCCTAGATTATTATAG
7513.23e-11CAAAACCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTTTTTAA
503.22e-10TAGATCAATTTTCCAGAGGAAACATAACACATGTTGTTAATTTT
1473.61e-10TATATAGTATCTCCATTGGAAATAGAGGAAACATTGGAAAGGCA

Motif ATTTCYWCWGGARMY

StartP-valueSite
4792.19e-10CCAGAGTTTCATTTCCACTGGAGCCGGGCGGCAAA
3442.50e-08GGAACTTCAGATTTCCTGTGGAGACAAAATGAACA
2681.66e-07CCAGCCCAAAACTTCCACAGGAAATGAGATAAGCG
3251.86e-07ATGTTTACATATTTCTACAGGAACTTCAGATTTCC
5195.46e-07GAAAAAATAAATTTTTTCTGGTGACAAACACTCTC

Motif AWTGAACATYTWWGGTCATTWG

StartP-valueSite
2934.94e-11GAGATAAGCGAATGAACATCTTTGGACATTTGATGTTTACAT
3958.58e-10TTTGTTCATTATTGCACCTTTTAGTTCATTAGATTAATCTAA
3618.58e-10GTGGAGACAAAATGAACATTTATGGTCATTAAAATTTGTTCA
8211.42e-09TTGCTGAAAAATTTAGCATCCCAGGTGGTTTGCAGCTACAAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010186 100.0 881 0 0 1 881 1 881 0.0 1628
aORI10010016 100.0 881 0 0 1 881 881 1 0.0 1628
aORI10010303 94.118 51 2 1 738 787 162 112 1.9e-15 77
aORI10010386 88.136 59 7 0 740 798 534 592 8.85e-14 71
aORI10010304 95.238 42 2 0 746 787 759 800 1.15e-12 68
aORI10010388 86.441 59 8 0 740 798 533 591 4.12e-12 66
aORI10010395 95.122 41 1 1 743 782 536 576 1.48e-11 64
aORI10010394 94.872 39 2 0 740 778 533 571 5.33e-11 62
aORI10010369 94.872 39 2 0 742 780 180 142 5.33e-11 62
aORI10010389 88.0 50 6 0 749 798 144 95 1.92e-10 60
aORI10010374 88.0 50 6 0 749 798 160 111 1.92e-10 60
aORI10010262 89.583 48 4 1 740 787 207 161 1.92e-10 60
aORI10010078 87.037 54 5 2 746 798 705 757 1.92e-10 60
aORI10010057 88.0 50 6 0 749 798 534 583 1.92e-10 60
aORI10010387 100.0 31 0 0 466 496 604 574 6.89e-10 58
aORI10010295 100.0 31 0 0 750 780 320 350 6.89e-10 58
aORI10010121 100.0 31 0 0 750 780 371 401 6.89e-10 58
aORI10010108 94.737 38 1 1 746 782 768 805 6.89e-10 58
aORI10010105 100.0 31 0 0 749 779 315 345 6.89e-10 58
aORI10010105 94.286 35 1 1 746 780 67 34 3.21e-08 53
aORI10010079 100.0 31 0 0 749 779 460 490 6.89e-10 58
aORI10010377 100.0 29 0 0 749 777 288 260 8.92e-09 55
aORI10010377 100.0 28 0 0 466 493 569 542 3.21e-08 53
aORI10010301 94.444 36 1 1 748 782 764 799 8.92e-09 55