RefSeq NZ_CP010835.1
DoriC accession number aORI10010295
OriC length 808 nt
OriC AT content 0.3317
The location of oriC region 30574..31381 nt
Browse in NCBI
OriC map
OriC sequences
ACGTTTCTATTTTTATCTTAAAACCCCCAGAGTTTCATTTCCACTGGAACTTCTCTGGGAAGGTATCTACCAAAAATTTTCCTGAGAGCTCGGATATTTACAAACTCACACTATATGACACATGTCATCTTTACATTTATCAACAAACATTTGTTTATTTAATGTACATTTTTGTACATTTAAATTATTCATTTTTTCATTAGAAGCATTACTTCACTTATAAAATGTTCAGAGAAAATTATTTAAATAGAAGATCGAGCTAATATGGGAGAGTGTTTGTAATGGATAAAAATTAATTATTCTGGGTGTTTGCCCGCGAGTTCCAGTGGAAATGAAACTCTGGGGGGTTTCACTTCTGTTTAACTTTAACTGAGCTTTTAATCGAATATGCTTAACAAAATTGGGCAAAAGTGAGTAACAATGTCTTAGTTTTTATGTACAAATTTGTTCATTGGATTTCCACAGGAAATTTTCTTGTACATTGGCCTTTGTAAACCATATCTCGTGGAGCATCCTGGAGCTCTTGAGGAATTTCTTGTGAAAGTTTTTCATATGAAATATATTTCAAATTTTATTTTGACATGCATGTGTATAAGCAAAACATAAAAACTCCGAGTGAAAGATAACCGTTGCTTTCCACTGGTTCGTGTGCTTCCTGTGGAAATAATACTCATGATGTGACAGTTTCACCTGAAAATCATGTCTTAATGTCACACTCATTTAAAGCTAATTAACAAAATGAGTTTCGTTTCCAGTGGAAATGAAGGTCATGTCATTAAAAAGCATGATTTCCAATGGAGGGACACCG
ACGTTTCTATTTTTATCTTAAAACCCCCAGAGTTTCATTTCCACTGGAACTTCTCTGGGAAGGTATCTACCAAAAATTTTCCTGAGAGCTCGGATATTTACAAACTCACACTATATGACACATGTCATCTTTACATTTATCAACAAACATTTGTTTATTTAATGTACATTTTTGTACATTTAAATTATTCATTTTTTCATTAGAAGCATTACTTCACTTATAAAATGTTCAGAGAAAATTATTTAAATAGAAGATCGAGCTAATATGGGAGAGTGTTTGTAATGGATAAAAATTAATTATTCTGGGTGTTTGCCCGCGAGTTCCAGTGGAAATGAAACTCTGGGGGGTTTCACTTCTGTTTAACTTTAACTGAGCTTTTAATCGAATATGCTTAACAAAATTGGGCAAAAGTGAGTAACAATGTCTTAGTTTTTATGTACAAATTTGTTCATTGGATTTCCACAGGAAATTTTCTTGTACATTGGCCTTTGTAAACCATATCTCGTGGAGCATCCTGGAGCTCTTGAGGAATTTCTTGTGAAAGTTTTTCATATGAAATATATTTCAAATTTTATTTTGACATGCATGTGTATAAGCAAAACATAAAAACTCCGAGTGAAAGATAACCGTTGCTTTCCACTGGTTCGTGTGCTTCCTGTGGAAATAATACTCATGATGTGACAGTTTCACCTGAAAATCATGTCTTAATGTCACACTCATTTAAAGCTAATTAACAAAATGAGTTTCGTTTCCAGTGGAAATGAAGGTCATGTCATTAAAAAGCATGATTTCCAATGGAGGGACACCG
ACGTTTCTATTTTTATCTTAAAACCCCCAGAGTTTCATTTCCACTGGAACTTCTCTGGGAAGGTATCTACCAAAAATTTTCCTGAGAGCTCGGATATTTACAAACTCACACTATATGACACATGTCATCTTTACATTTATCAACAAACATTTGTTTATTTAATGTACATTTTTGTACATTTAAATTATTCATTTTTTCATTAGAAGCATTACTTCACTTATAAAATGTTCAGAGAAAATTATTTAAATAGAAGATCGAGCTAATATGGGAGAGTGTTTGTAATGGATAAAAATTAATTATTCTGGGTGTTTGCCCGCGAGTTCCAGTGGAAATGAAACTCTGGGGGGTTTCACTTCTGTTTAACTTTAACTGAGCTTTTAATCGAATATGCTTAACAAAATTGGGCAAAAGTGAGTAACAATGTCTTAGTTTTTATGTACAAATTTGTTCATTGGATTTCCACAGGAAATTTTCTTGTACATTGGCCTTTGTAAACCATATCTCGTGGAGCATCCTGGAGCTCTTGAGGAATTTCTTGTGAAAGTTTTTCATATGAAATATATTTCAAATTTTATTTTGACATGCATGTGTATAAGCAAAACATAAAAACTCCGAGTGAAAGATAACCGTTGCTTTCCACTGGTTCGTGTGCTTCCTGTGGAAATAATACTCATGATGTGACAGTTTCACCTGAAAATCATGTCTTAATGTCACACTCATTTAAAGCTAATTAACAAAATGAGTTTCGTTTCCAGTGGAAATGAAGGTCATGTCATTAAAAAGCATGATTTCCAATGGAGGGACACCG
ORB     AT-rich region
The information of repeat sequences

Motif TTCCASTGGAAAT

StartP-valueSite
7501.98e-08TGAGTTTCGTTTCCAGTGGAAATGAAGGTCATG
3211.98e-08TGCCCGCGAGTTCCAGTGGAAATGAAACTCTGG
395.81e-08AGAGTTTCATTTCCACTGGAACTTCTCTGGGAA
6531.14e-07GTTCGTGTGCTTCCTGTGGAAATAATACTCATG
4581.14e-07TTCATTGGATTTCCACAGGAAATTTTCTTGTAC

Motif AAACTCMSAS

StartP-valueSite
211.78e-07TTTTATCTTAAAACCCCCAGAGTTTCATTT
6071.71e-06CAAAACATAAAAACTCCGAGTGAAAGATAA
1024.79e-06GGATATTTACAAACTCACACTATATGACAC

Motif TCTGGG

StartP-valueSite
3391.01e-04GAAATGAAACTCTGGGGGGTTTCACT
3011.01e-04AATTAATTATTCTGGGTGTTTGCCCG
541.01e-04CTGGAACTTCTCTGGGAAGGTATCTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010295 100.0 808 0 0 1 808 1 808 0.0 1493
aORI10010295 96.875 32 1 0 319 350 51 20 8.16e-09 55
aORI10010295 96.875 32 1 0 20 51 350 319 8.16e-09 55
aORI10010326 92.45 808 60 1 1 808 1 807 0.0 1153
aORI10010326 96.875 32 1 0 319 350 51 20 8.16e-09 55
aORI10010307 92.45 808 60 1 1 808 1 807 0.0 1153
aORI10010307 96.875 32 1 0 319 350 51 20 8.16e-09 55
aORI10010121 73.381 834 150 52 4 805 62 855 0.0 244
aORI10010121 96.97 33 1 0 318 350 110 78 2.27e-09 57
aORI10010121 96.875 32 1 0 20 51 401 370 8.16e-09 55
aORI10010101 90.196 51 5 0 2 52 774 724 1.05e-12 68
aORI10010101 96.875 32 1 0 319 350 725 756 8.16e-09 55
aORI10010079 90.196 51 3 2 314 362 453 503 3.77e-12 66
aORI10010105 84.375 64 8 2 288 349 282 345 4.88e-11 62
aORI10010105 94.286 35 0 2 320 352 64 30 2.94e-08 53
aORI10010369 100.0 32 0 0 319 350 173 142 1.75e-10 60
aORI10010369 96.97 33 1 0 19 51 141 173 2.27e-09 57
aORI10010186 100.0 31 0 0 320 350 750 780 6.31e-10 58
aORI10010016 100.0 31 0 0 320 350 132 102 6.31e-10 58
aORI10010262 94.595 37 1 1 15 50 161 197 2.27e-09 57
aORI10010395 100.0 29 0 0 320 348 543 571 8.16e-09 55
aORI10010394 100.0 29 0 0 320 348 543 571 8.16e-09 55
aORI10010389 100.0 29 0 0 320 348 143 115 8.16e-09 55
aORI10010388 100.0 29 0 0 320 348 543 571 8.16e-09 55
aORI10010386 100.0 29 0 0 320 348 544 572 8.16e-09 55
aORI10010377 87.5 48 4 2 320 366 287 241 8.16e-09 55
aORI10010374 100.0 29 0 0 320 348 159 131 8.16e-09 55
aORI10010304 100.0 29 0 0 320 348 763 791 8.16e-09 55
aORI10010303 100.0 29 0 0 320 348 149 121 8.16e-09 55
aORI10010108 100.0 29 0 0 320 348 772 800 8.16e-09 55
aORI10010078 100.0 29 0 0 320 348 709 737 8.16e-09 55
aORI10010057 100.0 29 0 0 320 348 535 563 8.16e-09 55