RefSeq NZ_LT900021.1
DoriC accession number aORI10010395
OriC length 701 nt
OriC AT content 0.3866
The location of oriC region 263961..264661 nt
Browse in NCBI
OriC map
OriC sequences
CTCCACAGGAACCACCAACTGAAATACGGCGTTGATGAATTAATGGTTTGCCCTTCCAGAGGAAACGAGGAAACCAAATGCACAGAGATGTGCACGAAATTTTGCATTTGGAAACCCGAAACAAATTAAGATTGGTTATTTCCACTGAAAGAAAAATGAACATGTATGGCCATCAAAAGATGAACACCAGGGAACAGTTTAGTTCATTTTAGTTAAACAATAACGATTGCAAAATTAGAAAAGTTAAACAGTTTGTATCCCCCCCAGAGTTTTGTTTCCAGTGGAGCGGGCTTTTGAAGCTTCCCACAGGAGATCGATTTAAAGTTGATAAAAAGCTCCCATTCTTTTTGTGGGTGTCAGTTTTTATACCTTTCTATGAACAACCAACTAAATTAACGTGGATAATGCATAAGGATTTTGAACGATATAATAAAATTCTACACAATTCATTGAATGATTCAACAGCTACGTACTTAAACAATCTCCCTAAATCTCTGTTACCTTTAACTACCCTGCTAAAACCGTCCGTTTTCCGAAAGCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGGCCATCGAAAAAGACCTTTGTTTCCACTGGAAAAACTGTGCTTCGTGGTATCTTGAGGACCATTGTTGAATTGTTTTGATTATGGGGCACATTTTTAAGGTTCGAGTGGAAACAAAGCCC
CTCCACAGGAACCACCAACTGAAATACGGCGTTGATGAATTAATGGTTTGCCCTTCCAGAGGAAACGAGGAAACCAAATGCACAGAGATGTGCACGAAATTTTGCATTTGGAAACCCGAAACAAATTAAGATTGGTTATTTCCACTGAAAGAAAAATGAACATGTATGGCCATCAAAAGATGAACACCAGGGAACAGTTTAGTTCATTTTAGTTAAACAATAACGATTGCAAAATTAGAAAAGTTAAACAGTTTGTATCCCCCCCAGAGTTTTGTTTCCAGTGGAGCGGGCTTTTGAAGCTTCCCACAGGAGATCGATTTAAAGTTGATAAAAAGCTCCCATTCTTTTTGTGGGTGTCAGTTTTTATACCTTTCTATGAACAACCAACTAAATTAACGTGGATAATGCATAAGGATTTTGAACGATATAATAAAATTCTACACAATTCATTGAATGATTCAACAGCTACGTACTTAAACAATCTCCCTAAATCTCTGTTACCTTTAACTACCCTGCTAAAACCGTCCGTTTTCCGAAAGCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGGCCATCGAAAAAGACCTTTGTTTCCACTGGAAAAACTGTGCTTCGTGGTATCTTGAGGACCATTGTTGAATTGTTTTGATTATGGGGCACATTTTTAAGGTTCGAGTGGAAACAAAGCCC
CTCCACAGGAACCACCAACTGAAATACGGCGTTGATGAATTAATGGTTTGCCCTTCCAGAGGAAACGAGGAAACCAAATGCACAGAGATGTGCACGAAATTTTGCATTTGGAAACCCGAAACAAATTAAGATTGGTTATTTCCACTGAAAGAAAAATGAACATGTATGGCCATCAAAAGATGAACACCAGGGAACAGTTTAGTTCATTTTAGTTAAACAATAACGATTGCAAAATTAGAAAAGTTAAACAGTTTGTATCCCCCCCAGAGTTTTGTTTCCAGTGGAGCGGGCTTTTGAAGCTTCCCACAGGAGATCGATTTAAAGTTGATAAAAAGCTCCCATTCTTTTTGTGGGTGTCAGTTTTTATACCTTTCTATGAACAACCAACTAAATTAACGTGGATAATGCATAAGGATTTTGAACGATATAATAAAATTCTACACAATTCATTGAATGATTCAACAGCTACGTACTTAAACAATCTCCCTAAATCTCTGTTACCTTTAACTACCCTGCTAAAACCGTCCGTTTTCCGAAAGCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGGCCATCGAAAAAGACCTTTGTTTCCACTGGAAAAACTGTGCTTCGTGGTATCTTGAGGACCATTGTTGAATTGTTTTGATTATGGGGCACATTTTTAAGGTTCGAGTGGAAACAAAGCCC
ORB     AT-rich region
The information of repeat sequences

Motif GBTTCCAGTGGAAA

StartP-valueSite
5422.80e-09TCCGAAAGCTGGTTCCAGTGGAAATGAAACTCTG
6802.63e-08ACATTTTTAAGGTTCGAGTGGAAACAAAGCCC
6014.08e-08AAAGACCTTTGTTTCCACTGGAAAAACTGTGCTT
2746.65e-08CCAGAGTTTTGTTTCCAGTGGAGCGGGCTTTTGA
521.73e-07AATGGTTTGCCCTTCCAGAGGAAACGAGGAAACC

Motif TGGCCATC

StartP-valueSite
5807.30e-06GTCTTTTCGATGGCCATCGAAAAAGACC
1677.30e-06TGAACATGTATGGCCATCAAAAGATGAA

Motif TGGGGVNCATTTTTDA

StartP-valueSite
6643.30e-08GTTTTGATTATGGGGCACATTTTTAAGGTTCGAGTG
5645.58e-08AATGAAACTCTGGGGGGTCTTTTCGATGGCCATCGA
6351.24e-07CGTGGTATCTTGAGGACCATTGTTGAATTGTTTTGA
3511.30e-07ATTCTTTTTGTGGGTGTCAGTTTTTATACCTTTCTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010395 100.0 701 0 0 1 701 1 701 0.0 1295
aORI10010374 88.889 702 76 2 1 701 701 1 0.0 863
aORI10010377 74.614 713 143 31 1 694 1 694 0.0 279
aORI10010377 92.5 40 3 0 531 570 299 260 5.45e-10 58
aORI10010387 90.0 100 9 1 522 621 558 656 4.1e-31 128
aORI10010386 95.122 82 3 1 536 616 536 617 4.1e-31 128
aORI10010108 90.426 94 8 1 519 612 749 841 1.91e-29 122
aORI10010078 89.474 95 9 1 519 613 686 779 2.47e-28 119
aORI10010394 92.683 82 5 1 536 616 535 616 8.87e-28 117
aORI10010301 87.129 101 13 0 532 632 755 855 3.19e-27 115
aORI10010388 91.463 82 6 1 536 616 535 616 4.13e-26 111
aORI10010304 88.043 92 10 1 522 613 743 833 5.34e-25 108
aORI10010303 86.957 92 10 2 522 612 170 80 2.48e-23 102
aORI10010057 85.417 96 14 0 519 614 511 606 8.93e-23 100
aORI10010389 90.411 73 7 0 542 614 144 72 1.16e-21 97
aORI10010186 95.122 41 1 1 536 576 743 782 1.17e-11 64
aORI10010016 95.122 41 1 1 536 576 139 100 1.17e-11 64
aORI10010105 96.97 33 1 0 539 571 312 344 1.96e-09 57
aORI10010105 94.286 35 1 1 543 577 64 31 2.54e-08 53
aORI10010079 100.0 30 0 0 542 571 460 489 1.96e-09 57
aORI10010369 100.0 29 0 0 543 571 172 144 7.05e-09 55
aORI10010295 100.0 29 0 0 543 571 320 348 7.05e-09 55
aORI10010121 100.0 29 0 0 543 571 371 399 7.05e-09 55
aORI10010262 84.906 53 7 1 518 569 223 171 2.54e-08 53