RefSeq NC_016051.1
DoriC accession number aORI10010108
OriC length 952 nt
OriC AT content 0.5746
The location of oriC region 1530315..1531266 nt
Browse in NCBI
OriC map
OriC sequences
AGGCACCACCGATTTTACTTCCAGTGGAAACGAAACTCCCCGCATCACATCCGGGTTGATTAAATCTTGTGTTCCGCAATATGAGACGCAATTAGGCGAGAGATCATGACACTATGCTCATTAATTCCACGGATATTGAGCAGATGTTGCAGTACTTTCCACCCGAAGCACCGGACACAGTGGAAAGCTAACCAATCTACGATGAGGGGTTTATAGCCTTTGCTTGTCAGGAACCTGTTCAAAGGAGGAGAAAGTTTCCACTGGATAGGCAAGGTGTTCCAAAGGAAACGGGAACTTTTAATGATCAGAGATGAACATTGAATTGTACAAACGTAAAATGAACAAGGCAGCGCATTTCAAATTTCCACTGAAAGAAAAATGAACATAAATGGCTATCAACTTTAGTTCATTGACGCACTGCTTTGGGCAGACGGGGTAAGCAGAAATAGTTAAAATTTAAGTAAAGTTAAACGGATTTGTAGCCCCAGGGGGTTTTGTTTCCACTGGAACCGGGATAATGCTACACCCTTTCTATCCTCGTAGTTTTGGTGAAAACACTCCCACTTTCTCTACGTTTTTGGCTTTTAATCTTTTGCATGAACAATGTTCATATTATACTCGATGATTTAAATGAAAATAGGGAGCTCCTGAACACATTCAAATTAACTCCAAAAGTGTGATGAACAGCATACTATTTACGTACTAAAAATCCCAACCAAAACGACTTTTTCAAATGCAATGTCCCCCTAACCCGTCCATTTCCGTATCCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGACGATCGAAAAAGACCTTTGTTTCCACTGGAGCTAAATGTTCATCGGAGCTCATTCCCCGGGTCTGGTGTACCAATGTTTTTAAGCCCTCTTCTCGATTTCACTACATGCTGCCGGTTACCGTCGTGAGGCGACTGCTTCGA
AGGCACCACCGATTTTACTTCCAGTGGAAACGAAACTCCCCGCATCACATCCGGGTTGATTAAATCTTGTGTTCCGCAATATGAGACGCAATTAGGCGAGAGATCATGACACTATGCTCATTAATTCCACGGATATTGAGCAGATGTTGCAGTACTTTCCACCCGAAGCACCGGACACAGTGGAAAGCTAACCAATCTACGATGAGGGGTTTATAGCCTTTGCTTGTCAGGAACCTGTTCAAAGGAGGAGAAAGTTTCCACTGGATAGGCAAGGTGTTCCAAAGGAAACGGGAACTTTTAATGATCAGAGATGAACATTGAATTGTACAAACGTAAAATGAACAAGGCAGCGCATTTCAAATTTCCACTGAAAGAAAAATGAACATAAATGGCTATCAACTTTAGTTCATTGACGCACTGCTTTGGGCAGACGGGGTAAGCAGAAATAGTTAAAATTTAAGTAAAGTTAAACGGATTTGTAGCCCCAGGGGGTTTTGTTTCCACTGGAACCGGGATAATGCTACACCCTTTCTATCCTCGTAGTTTTGGTGAAAACACTCCCACTTTCTCTACGTTTTTGGCTTTTAATCTTTTGCATGAACAATGTTCATATTATACTCGATGATTTAAATGAAAATAGGGAGCTCCTGAACACATTCAAATTAACTCCAAAAGTGTGATGAACAGCATACTATTTACGTACTAAAAATCCCAACCAAAACGACTTTTTCAAATGCAATGTCCCCCTAACCCGTCCATTTCCGTATCCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGACGATCGAAAAAGACCTTTGTTTCCACTGGAGCTAAATGTTCATCGGAGCTCATTCCCCGGGTCTGGTGTACCAATGTTTTTAAGCCCTCTTCTCGATTTCACTACATGCTGCCGGTTACCGTCGTGAGGCGACTGCTTCGA
AGGCACCACCGATTTTACTTCCAGTGGAAACGAAACTCCCCGCATCACATCCGGGTTGATTAAATCTTGTGTTCCGCAATATGAGACGCAATTAGGCGAGAGATCATGACACTATGCTCATTAATTCCACGGATATTGAGCAGATGTTGCAGTACTTTCCACCCGAAGCACCGGACACAGTGGAAAGCTAACCAATCTACGATGAGGGGTTTATAGCCTTTGCTTGTCAGGAACCTGTTCAAAGGAGGAGAAAGTTTCCACTGGATAGGCAAGGTGTTCCAAAGGAAACGGGAACTTTTAATGATCAGAGATGAACATTGAATTGTACAAACGTAAAATGAACAAGGCAGCGCATTTCAAATTTCCACTGAAAGAAAAATGAACATAAATGGCTATCAACTTTAGTTCATTGACGCACTGCTTTGGGCAGACGGGGTAAGCAGAAATAGTTAAAATTTAAGTAAAGTTAAACGGATTTGTAGCCCCAGGGGGTTTTGTTTCCACTGGAACCGGGATAATGCTACACCCTTTCTATCCTCGTAGTTTTGGTGAAAACACTCCCACTTTCTCTACGTTTTTGGCTTTTAATCTTTTGCATGAACAATGTTCATATTATACTCGATGATTTAAATGAAAATAGGGAGCTCCTGAACACATTCAAATTAACTCCAAAAGTGTGATGAACAGCATACTATTTACGTACTAAAAATCCCAACCAAAACGACTTTTTCAAATGCAATGTCCCCCTAACCCGTCCATTTCCGTATCCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGACGATCGAAAAAGACCTTTGTTTCCACTGGAGCTAAATGTTCATCGGAGCTCATTCCCCGGGTCTGGTGTACCAATGTTTTTAAGCCCTCTTCTCGATTTCACTACATGCTGCCGGTTACCGTCGTGAGGCGACTGCTTCGA
ORB     AT-rich region
The information of repeat sequences

Motif GTTTCCASTGGA

StartP-valueSite
8304.91e-08AAAGACCTTTGTTTCCACTGGAGCTAAATGTT
4974.91e-08AGGGGGTTTTGTTTCCACTGGAACCGGGATAA
2544.91e-08GGAGGAGAAAGTTTCCACTGGATAGGCAAGGT
7712.41e-07TCCGTATCCCGGTTCCAGTGGAAATGAAACTC
175.86e-07CACCGATTTTACTTCCAGTGGAAACGAAACTC

Motif ACTAYNCBCATTHTATCCDCGTWKWTT

StartP-valueSite
5203.27e-11CCGGGATAATGCTACACCCTTTCTATCCTCGTAGTTTTGGTGAAAAC
1117.17e-11AGATCATGACACTATGCTCATTAATTCCACGGATATTGAGCAGATGT
351.78e-10TGGAAACGAAACTCCCCGCATCACATCCGGGTTGATTAAATCTTGTG
6011.18e-09TTTTGCATGAACAATGTTCATATTATACTCGATGATTTAAATGAAAA
5543.43e-09TTTTGGTGAAAACACTCCCACTTTCTCTACGTTTTTGGCTTTTAATC

Motif GGGGGT

StartP-valueSite
7951.06e-04TGAAACTCTGGGGGGTCTTTTCGATG
4881.06e-04TGTAGCCCCAGGGGGTTTTGTTTCCA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010108 100.0 952 0 0 1 952 1 952 0.0 1759
aORI10010078 84.783 828 108 18 98 916 35 853 0.0 815
aORI10010373 79.346 489 77 20 156 632 158 634 0.0 322
aORI10010395 90.426 94 8 1 749 841 519 612 2.61e-29 122
aORI10010374 97.183 71 2 0 771 841 160 90 9.38e-29 121
aORI10010386 95.833 72 1 2 771 841 543 613 4.36e-27 115
aORI10010387 88.889 90 10 0 752 841 558 647 5.65e-26 111
aORI10010377 88.298 94 10 1 749 841 519 612 5.65e-26 111
aORI10010377 100.0 30 0 0 770 799 289 260 2.68e-09 57
aORI10010304 87.5 96 12 0 746 841 737 832 5.65e-26 111
aORI10010394 91.549 71 6 0 771 841 542 612 4.4e-22 99
aORI10010388 91.667 72 4 2 771 841 542 612 4.4e-22 99
aORI10010301 91.549 71 6 0 771 841 765 835 4.4e-22 99
aORI10010389 90.141 71 7 0 771 841 144 74 2.05e-20 94
aORI10010057 90.141 71 7 0 771 841 534 604 2.05e-20 94
aORI10010303 83.871 93 12 3 752 842 170 79 3.42e-18 86
aORI10010105 93.023 43 2 1 764 806 72 31 5.77e-11 62
aORI10010105 100.0 32 0 0 769 800 313 344 2.07e-10 60
aORI10010186 94.737 38 1 1 768 805 746 782 7.46e-10 58
aORI10010016 97.143 35 0 1 771 805 133 100 7.46e-10 58
aORI10010369 96.97 33 1 0 768 800 176 144 2.68e-09 57
aORI10010262 83.607 61 8 2 752 811 218 159 2.68e-09 57
aORI10010079 100.0 30 0 0 771 800 460 489 2.68e-09 57
aORI10010295 100.0 29 0 0 772 800 320 348 9.65e-09 55
aORI10010121 96.97 33 0 1 769 800 367 399 9.65e-09 55