RefSeq NZ_CP015101.1
DoriC accession number aORI10010386
OriC length 686 nt
OriC AT content 0.4023
The location of oriC region 1664501..1665186 nt
Browse in NCBI
OriC map
OriC sequences
GTTAACCACCACTAAAAATTGGACAAAGGGGTTAATAACGTTACACCCAAAACAAACTTCCACAGGAAACCAGGGAGTTCTTAGAACACTTGTGTACACCAAAAATTGCTGTTTGTAAACGGACAGAGAAAGTCATCGACCGGCTTCCACTGAAAGGAGAATGAACAGGAGCGAACATCAAAAGAGATACATTGGAGCACGAGAATACACATTTTGAGAAAACAGTTGCATTAACGTGTTAGAGAAAACGTTAACAAAATTGACCCCCAGGGAGTTTTGTTTCCTGTGGAGCGGGGTTTTGGGCTACTCCCATGTTTGGACTGATCTCCTGGTGAAACTCTCCCATCCTTTTTTCAACTTTTGGTATTTATATGTTTTTATGAACAATGTTCATAAAAAGGATGTAATTTGGAATAGTGATGAATGATAGTTCACCGTATCGTGAACCTTGTTTAAAAGTAGTCTCATTGCTCTTTGTAATCTGTATTATAAACCCTTCTTTTCATATTCACAGACTATAGCTCCGTCCATCGTCAAAACTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTAGATGGACATCGAAAAAGACCTTTGTTTCCACTGGAAAAATGAGTCCATCCGTGAATGGGCCTGGGCATGGGTGATAATTTTATTAAGGCAGGGGTCATAGTGCACATC
GTTAACCACCACTAAAAATTGGACAAAGGGGTTAATAACGTTACACCCAAAACAAACTTCCACAGGAAACCAGGGAGTTCTTAGAACACTTGTGTACACCAAAAATTGCTGTTTGTAAACGGACAGAGAAAGTCATCGACCGGCTTCCACTGAAAGGAGAATGAACAGGAGCGAACATCAAAAGAGATACATTGGAGCACGAGAATACACATTTTGAGAAAACAGTTGCATTAACGTGTTAGAGAAAACGTTAACAAAATTGACCCCCAGGGAGTTTTGTTTCCTGTGGAGCGGGGTTTTGGGCTACTCCCATGTTTGGACTGATCTCCTGGTGAAACTCTCCCATCCTTTTTTCAACTTTTGGTATTTATATGTTTTTATGAACAATGTTCATAAAAAGGATGTAATTTGGAATAGTGATGAATGATAGTTCACCGTATCGTGAACCTTGTTTAAAAGTAGTCTCATTGCTCTTTGTAATCTGTATTATAAACCCTTCTTTTCATATTCACAGACTATAGCTCCGTCCATCGTCAAAACTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTAGATGGACATCGAAAAAGACCTTTGTTTCCACTGGAAAAATGAGTCCATCCGTGAATGGGCCTGGGCATGGGTGATAATTTTATTAAGGCAGGGGTCATAGTGCACATC
GTTAACCACCACTAAAAATTGGACAAAGGGGTTAATAACGTTACACCCAAAACAAACTTCCACAGGAAACCAGGGAGTTCTTAGAACACTTGTGTACACCAAAAATTGCTGTTTGTAAACGGACAGAGAAAGTCATCGACCGGCTTCCACTGAAAGGAGAATGAACAGGAGCGAACATCAAAAGAGATACATTGGAGCACGAGAATACACATTTTGAGAAAACAGTTGCATTAACGTGTTAGAGAAAACGTTAACAAAATTGACCCCCAGGGAGTTTTGTTTCCTGTGGAGCGGGGTTTTGGGCTACTCCCATGTTTGGACTGATCTCCTGGTGAAACTCTCCCATCCTTTTTTCAACTTTTGGTATTTATATGTTTTTATGAACAATGTTCATAAAAAGGATGTAATTTGGAATAGTGATGAATGATAGTTCACCGTATCGTGAACCTTGTTTAAAAGTAGTCTCATTGCTCTTTGTAATCTGTATTATAAACCCTTCTTTTCATATTCACAGACTATAGCTCCGTCCATCGTCAAAACTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTAGATGGACATCGAAAAAGACCTTTGTTTCCACTGGAAAAATGAGTCCATCCGTGAATGGGCCTGGGCATGGGTGATAATTTTATTAAGGCAGGGGTCATAGTGCACATC
ORB     AT-rich region
The information of repeat sequences

Motif GBTTCCASTGGAA

StartP-valueSite
6022.20e-08AAAGACCTTTGTTTCCACTGGAAAAATGAGTCC
5438.31e-08GTCAAAACTGGGTTCCAGTGGAAATGAAACTCT
1431.46e-07TCATCGACCGGCTTCCACTGAAAGGAGAATGAA
566.21e-07CCCAAAACAAACTTCCACAGGAAACCAGGGAGT
2796.58e-07AGGGAGTTTTGTTTCCTGTGGAGCGGGGTTTTG

Motif CHCCCA

StartP-valueSite
3401.09e-04TGGTGAAACTCTCCCATCCTTTTTTC
3071.09e-04TTTTGGGCTACTCCCATGTTTGGACT
2641.80e-04ACAAAATTGACCCCCAGGGAGTTTTG
442.97e-04AATAACGTTACACCCAAAACAAACTT

Motif GGGGTY

StartP-valueSite
6691.17e-04TATTAAGGCAGGGGTCATAGTGCACA
5681.17e-04GAAACTCTGGGGGGTCTTTTAGATGG
2932.96e-04CCTGTGGAGCGGGGTTTTGGGCTACT
282.96e-04ATTGGACAAAGGGGTTAATAACGTTA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010386 100.0 686 0 0 1 686 1 686 0.0 1267
aORI10010394 80.747 696 106 22 4 686 4 684 0.0 518
aORI10010388 79.712 695 111 22 4 684 4 682 0.0 475
aORI10010387 75.255 392 72 23 245 623 279 658 1.10002e-41 163
aORI10010395 95.122 82 3 1 536 617 536 616 4.01e-31 128
aORI10010374 95.062 81 4 0 537 617 166 86 4.01e-31 128
aORI10010377 93.827 81 5 0 537 617 536 616 1.86e-29 122
aORI10010377 94.595 37 2 0 535 571 296 260 5.33e-10 58
aORI10010108 95.833 72 1 2 543 613 771 841 3.12e-27 115
aORI10010389 88.298 94 10 1 523 615 165 72 4.04e-26 111
aORI10010078 94.521 73 2 2 543 614 708 779 4.04e-26 111
aORI10010057 91.139 79 7 0 537 615 528 606 5.22e-25 108
aORI10010304 93.056 72 5 0 543 614 762 833 1.88e-24 106
aORI10010301 85.263 95 13 1 523 616 744 838 1.13e-21 97
aORI10010303 90.278 72 5 2 543 613 150 80 1.46e-20 94
aORI10010186 88.136 59 7 0 534 592 740 798 6.85e-14 71
aORI10010016 88.136 59 7 0 534 592 142 84 6.85e-14 71
aORI10010262 86.885 61 6 2 523 582 219 160 8.86e-13 68
aORI10010105 100.0 30 0 0 543 572 315 344 1.92e-09 57
aORI10010105 96.875 32 0 1 544 575 64 34 2.48e-08 53
aORI10010079 100.0 30 0 0 543 572 460 489 1.92e-09 57
aORI10010369 100.0 29 0 0 544 572 172 144 6.9e-09 55
aORI10010295 100.0 29 0 0 544 572 320 348 6.9e-09 55
aORI10010121 100.0 29 0 0 544 572 371 399 6.9e-09 55