RefSeq NC_022084.1
DoriC accession number aORI10010262
OriC length 406 nt
OriC AT content 0.3153
The location of oriC region 974680..975085 nt
Browse in NCBI
OriC map
OriC sequences
TGCATTAGAAGTTAAGGTCTAACCTTAAAAAGCTTCACTTTCCAGTGGAAATAAAACACCACAATTTTGGATAATGATGATTGATTTGACACGTCAATGATTAAAAGTTCCAGTGGAAATAAAGCTCTTTTTCCATACTTATCTAAGCGTTCATAAAATCATCTAACAAACCCCCAGAGTTTCATTTCCACTGGAACCTTGTTTTGAGAAATGGACGGATTTTGCGAATGAAGAAAATGTAAAAAGCATTTAAAAAGGCATTTAACGTTTACAAATATTGATTTGTTCACGATGCTTAAATGATAAACGAAGGATAGTTATTATCTTTACCATTTATTCGTGTCATATTTGAACAATGTTCATAGATAGGTATATATATCCAAAAACACAGAAATAGTGGGAGTGT
TGCATTAGAAGTTAAGGTCTAACCTTAAAAAGCTTCACTTTCCAGTGGAAATAAAACACCACAATTTTGGATAATGATGATTGATTTGACACGTCAATGATTAAAAGTTCCAGTGGAAATAAAGCTCTTTTTCCATACTTATCTAAGCGTTCATAAAATCATCTAACAAACCCCCAGAGTTTCATTTCCACTGGAACCTTGTTTTGAGAAATGGACGGATTTTGCGAATGAAGAAAATGTAAAAAGCATTTAAAAAGGCATTTAACGTTTACAAATATTGATTTGTTCACGATGCTTAAATGATAAACGAAGGATAGTTATTATCTTTACCATTTATTCGTGTCATATTTGAACAATGTTCATAGATAGGTATATATATCCAAAAACACAGAAATAGTGGGAGTGT
TGCATTAGAAGTTAAGGTCTAACCTTAAAAAGCTTCACTTTCCAGTGGAAATAAAACACCACAATTTTGGATAATGATGATTGATTTGACACGTCAATGATTAAAAGTTCCAGTGGAAATAAAGCTCTTTTTCCATACTTATCTAAGCGTTCATAAAATCATCTAACAAACCCCCAGAGTTTCATTTCCACTGGAACCTTGTTTTGAGAAATGGACGGATTTTGCGAATGAAGAAAATGTAAAAAGCATTTAAAAAGGCATTTAACGTTTACAAATATTGATTTGTTCACGATGCTTAAATGATAAACGAAGGATAGTTATTATCTTTACCATTTATTCGTGTCATATTTGAACAATGTTCATAGATAGGTATATATATCCAAAAACACAGAAATAGTGGGAGTGT
ORB     AT-rich region
The information of repeat sequences

Motif TTCCASTGGAA

StartP-valueSite
1081.63e-07TGATTAAAAGTTCCAGTGGAAATAAAGCTCT
401.63e-07AAGCTTCACTTTCCAGTGGAAATAAAACACC
1863.12e-07AGAGTTTCATTTCCACTGGAACCTTGTTTTG

Motif CMCCAS

StartP-valueSite
1725.98e-05TCTAACAAACCCCCAGAGTTTCATTT
571.28e-04GGAAATAAAACACCACAATTTTGGAT

Motif STTCAC

StartP-valueSite
331.28e-04CCTTAAAAAGCTTCACTTTCCAGTGG
2852.69e-04ATATTGATTTGTTCACGATGCTTAAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010262 100.0 406 0 0 1 406 1 406 0.0 750
aORI10010394 87.5 64 6 2 160 222 581 519 1.11e-14 73
aORI10010388 90.385 52 4 1 171 222 569 519 5.16e-13 68
aORI10010386 86.885 61 6 2 160 219 582 523 5.16e-13 68
aORI10010389 88.462 52 4 2 171 221 117 167 2.4e-11 62
aORI10010186 89.583 48 4 1 161 207 787 740 8.64e-11 60
aORI10010016 89.583 48 4 1 161 207 95 142 8.64e-11 60
aORI10010303 87.755 49 6 0 171 219 123 171 3.11e-10 58
aORI10010374 82.09 67 10 2 159 224 120 185 1.12e-09 57
aORI10010326 94.595 37 1 1 161 197 15 50 1.12e-09 57
aORI10010307 94.595 37 1 1 161 197 15 50 1.12e-09 57
aORI10010304 92.5 40 2 1 160 198 801 762 1.12e-09 57
aORI10010295 94.595 37 1 1 161 197 15 50 1.12e-09 57
aORI10010121 94.595 37 1 1 161 197 73 108 1.12e-09 57
aORI10010108 82.812 64 9 2 159 221 811 749 1.12e-09 57
aORI10010101 100.0 30 0 0 168 197 755 726 1.12e-09 57
aORI10010057 86.538 52 5 2 171 221 561 511 1.12e-09 57
aORI10010079 100.0 29 0 0 171 199 487 459 4.02e-09 55
aORI10010078 86.275 51 6 1 171 221 735 686 4.02e-09 55
aORI10010395 84.906 53 7 1 171 223 569 518 1.45e-08 53
aORI10010377 100.0 28 0 0 171 198 261 288 1.45e-08 53
aORI10010301 81.818 66 9 3 159 222 805 741 1.45e-08 53
aORI10010105 100.0 28 0 0 171 198 342 315 1.45e-08 53