RefSeq NZ_CP015102.1
DoriC accession number aORI10010387
OriC length 720 nt
OriC AT content 0.4
The location of oriC region 344429..345148 nt
Browse in NCBI
OriC map
OriC sequences
AGGAATCACCATGCCAAGTACGCGTCAGGGTTAATTAACTTTGCACAGGAAATCACAGTGGACAGTGATCATGTTCAAGCGAAACCGGCTGCCTCCACAGGAAACTGACGGGTTCGATGGATATTAACGGACATCGGAATTTTACAAATATAAATGAGCTGATGAATACGTTAGGGCATTTCCACTGAAAGGAGAATGAACATTAATGGACATGAAAATCCGAACAGTACTGACCATTATAGTGCATTTTAGGAAAACATTTTAGTTTCACAATTCAAAAAACGTTAACACAAGTGTACCCCCAGGGAGTTTCATTTCCAGTGGAAGCGGGTTTTGGCTACTCCATCTTTCCTTGTTGTTTTTGGTGAAACTCTCCCTTTTTCTTTACAAGTCTTGATATTTATAGATTATTGTGAACAATGTTCACAAAAATTATTTTAAAACAGGGTTTAAATGAATATTAATCCACAAAATCTCAAAGGGGCTTAAAAGCAGTTGATTTTCCATTTGTAATCTACCTTATAAACCTCGCTTTCTATTTTTTCCTCCTGTATGAGCCGTCCATCTCCGAAACCCGGCTCCAGTGGAAATGAAACTCTGGGGGGTCTTTCAGATGGCCATCTGAAAAGACCTTTGTTTCCACTGGAAAAACTGTGTCATTGGCGACCCCCTGTGTGCAGCAGTGATAGGTTTTTAAATATCCTGGGGGTACTCCTGAAC
AGGAATCACCATGCCAAGTACGCGTCAGGGTTAATTAACTTTGCACAGGAAATCACAGTGGACAGTGATCATGTTCAAGCGAAACCGGCTGCCTCCACAGGAAACTGACGGGTTCGATGGATATTAACGGACATCGGAATTTTACAAATATAAATGAGCTGATGAATACGTTAGGGCATTTCCACTGAAAGGAGAATGAACATTAATGGACATGAAAATCCGAACAGTACTGACCATTATAGTGCATTTTAGGAAAACATTTTAGTTTCACAATTCAAAAAACGTTAACACAAGTGTACCCCCAGGGAGTTTCATTTCCAGTGGAAGCGGGTTTTGGCTACTCCATCTTTCCTTGTTGTTTTTGGTGAAACTCTCCCTTTTTCTTTACAAGTCTTGATATTTATAGATTATTGTGAACAATGTTCACAAAAATTATTTTAAAACAGGGTTTAAATGAATATTAATCCACAAAATCTCAAAGGGGCTTAAAAGCAGTTGATTTTCCATTTGTAATCTACCTTATAAACCTCGCTTTCTATTTTTTCCTCCTGTATGAGCCGTCCATCTCCGAAACCCGGCTCCAGTGGAAATGAAACTCTGGGGGGTCTTTCAGATGGCCATCTGAAAAGACCTTTGTTTCCACTGGAAAAACTGTGTCATTGGCGACCCCCTGTGTGCAGCAGTGATAGGTTTTTAAATATCCTGGGGGTACTCCTGAAC
AGGAATCACCATGCCAAGTACGCGTCAGGGTTAATTAACTTTGCACAGGAAATCACAGTGGACAGTGATCATGTTCAAGCGAAACCGGCTGCCTCCACAGGAAACTGACGGGTTCGATGGATATTAACGGACATCGGAATTTTACAAATATAAATGAGCTGATGAATACGTTAGGGCATTTCCACTGAAAGGAGAATGAACATTAATGGACATGAAAATCCGAACAGTACTGACCATTATAGTGCATTTTAGGAAAACATTTTAGTTTCACAATTCAAAAAACGTTAACACAAGTGTACCCCCAGGGAGTTTCATTTCCAGTGGAAGCGGGTTTTGGCTACTCCATCTTTCCTTGTTGTTTTTGGTGAAACTCTCCCTTTTTCTTTACAAGTCTTGATATTTATAGATTATTGTGAACAATGTTCACAAAAATTATTTTAAAACAGGGTTTAAATGAATATTAATCCACAAAATCTCAAAGGGGCTTAAAAGCAGTTGATTTTCCATTTGTAATCTACCTTATAAACCTCGCTTTCTATTTTTTCCTCCTGTATGAGCCGTCCATCTCCGAAACCCGGCTCCAGTGGAAATGAAACTCTGGGGGGTCTTTCAGATGGCCATCTGAAAAGACCTTTGTTTCCACTGGAAAAACTGTGTCATTGGCGACCCCCTGTGTGCAGCAGTGATAGGTTTTTAAATATCCTGGGGGTACTCCTGAAC
ORB     AT-rich region
The information of repeat sequences

Motif TCCASWGGAAA

StartP-valueSite
6392.29e-07GACCTTTGTTTCCACTGGAAAAACTGTGTCA
5806.84e-07GAAACCCGGCTCCAGTGGAAATGAAACTCTG
946.84e-07ACCGGCTGCCTCCACAGGAAACTGACGGGTT
3171.60e-06GAGTTTCATTTCCAGTGGAAGCGGGTTTTGG
422.20e-06TAATTAACTTTGCACAGGAAATCACAGTGGA

Motif RATGAAYATTAWHGGRCAT

StartP-valueSite
1952.04e-10CTGAAAGGAGAATGAACATTAATGGACATGAAAATCCGA
1161.66e-09TGACGGGTTCGATGGATATTAACGGACATCGGAATTTTA
1614.07e-08TAAATGAGCTGATGAATACGTTAGGGCATTTCCACTGAA
4534.79e-08ACAGGGTTTAAATGAATATTAATCCACAAAATCTCAAAG
2294.79e-08TCCGAACAGTACTGACCATTATAGTGCATTTTAGGAAAA

Motif CGAAACCSG

StartP-valueSite
5693.39e-06CGTCCATCTCCGAAACCCGGCTCCAGTGG
803.39e-06CATGTTCAAGCGAAACCGGCTGCCTCCAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010387 100.0 720 0 0 1 720 1 720 0.0 1330
aORI10010057 75.556 495 85 29 174 649 129 606 0.0 211
aORI10010388 74.194 496 99 26 177 658 142 622 0.0 180
aORI10010389 73.992 496 92 29 174 649 550 72 8.92627e-43 167
aORI10010386 75.255 392 72 23 279 658 245 623 1.15005e-41 163
aORI10010394 72.946 499 100 31 177 658 142 622 5.41e-35 141
aORI10010395 90.0 100 9 1 558 656 522 621 4.21e-31 128
aORI10010377 87.736 106 11 2 558 662 522 626 1.96e-29 122
aORI10010108 88.889 90 10 0 558 647 752 841 4.24e-26 111
aORI10010374 86.869 99 12 1 558 655 180 82 1.53e-25 110
aORI10010078 87.912 91 11 0 558 648 689 779 5.49e-25 108
aORI10010304 84.783 92 12 2 558 648 743 833 5.53e-20 92
aORI10010303 84.783 92 11 3 558 647 170 80 1.99e-19 90
aORI10010186 100.0 31 0 0 574 604 496 466 5.61e-10 58
aORI10010016 100.0 31 0 0 574 604 386 416 5.61e-10 58