RefSeq NC_011529.1
DoriC accession number aORI10010057
OriC length 677 nt
OriC AT content 0.6425
The location of oriC region 1510250..1510926 nt
Browse in NCBI
OriC map
OriC sequences
TGAAATCACCAAGGGAACTTTCGATTCGAAACTTAATAACGGTATCGTTCCAGCGGAAACTGAAGGGGTCAAAGAACATAATAGTGCATCAAACATTTACATTCGAAAATGAACAATAGCATCCAGATGGGCATTTCCACTGAAAGAAGAATGAACATTTTTGGACAGAAAATCATGTACACTAATGCTCCAAATCGTACTATTTTGGTAAACATATGTACTAAACACAAGACAGAACATTAAACGGTTTCGTAGTCCCCCAGAGTTCTGTTTCCGGTGGAGGCGGGCTTTGGCTACTCCCATATTGTCCTTTGGTTTTTGGTGAAACTCTCCCGCTTTCTTTACAATTCCCAATATTTATATTTTTTCATGAACAATGTTCATAAAAAATCTCAAACTCATAAAGATCATGAAAATTAGTCTAAATATTCAAAGAGTAGATTTAAAATCTGTTGATTTTATGTTTGTAATGTCCTTTATAAATGGAGCTTTCTGTTTTTTCTGGCATGTAATCCATCCATTCTCCGAAATTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTCAAATAATCATCGAAAAAGACCTTTGTTTCCAGTGGAAATCTAACTCCATTACTGGACACCACAAAGCATTAATGATACTTTTTTAAACCTGCTAACGATAGTGTACAAC
TGAAATCACCAAGGGAACTTTCGATTCGAAACTTAATAACGGTATCGTTCCAGCGGAAACTGAAGGGGTCAAAGAACATAATAGTGCATCAAACATTTACATTCGAAAATGAACAATAGCATCCAGATGGGCATTTCCACTGAAAGAAGAATGAACATTTTTGGACAGAAAATCATGTACACTAATGCTCCAAATCGTACTATTTTGGTAAACATATGTACTAAACACAAGACAGAACATTAAACGGTTTCGTAGTCCCCCAGAGTTCTGTTTCCGGTGGAGGCGGGCTTTGGCTACTCCCATATTGTCCTTTGGTTTTTGGTGAAACTCTCCCGCTTTCTTTACAATTCCCAATATTTATATTTTTTCATGAACAATGTTCATAAAAAATCTCAAACTCATAAAGATCATGAAAATTAGTCTAAATATTCAAAGAGTAGATTTAAAATCTGTTGATTTTATGTTTGTAATGTCCTTTATAAATGGAGCTTTCTGTTTTTTCTGGCATGTAATCCATCCATTCTCCGAAATTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTCAAATAATCATCGAAAAAGACCTTTGTTTCCAGTGGAAATCTAACTCCATTACTGGACACCACAAAGCATTAATGATACTTTTTTAAACCTGCTAACGATAGTGTACAAC
TGAAATCACCAAGGGAACTTTCGATTCGAAACTTAATAACGGTATCGTTCCAGCGGAAACTGAAGGGGTCAAAGAACATAATAGTGCATCAAACATTTACATTCGAAAATGAACAATAGCATCCAGATGGGCATTTCCACTGAAAGAAGAATGAACATTTTTGGACAGAAAATCATGTACACTAATGCTCCAAATCGTACTATTTTGGTAAACATATGTACTAAACACAAGACAGAACATTAAACGGTTTCGTAGTCCCCCAGAGTTCTGTTTCCGGTGGAGGCGGGCTTTGGCTACTCCCATATTGTCCTTTGGTTTTTGGTGAAACTCTCCCGCTTTCTTTACAATTCCCAATATTTATATTTTTTCATGAACAATGTTCATAAAAAATCTCAAACTCATAAAGATCATGAAAATTAGTCTAAATATTCAAAGAGTAGATTTAAAATCTGTTGATTTTATGTTTGTAATGTCCTTTATAAATGGAGCTTTCTGTTTTTTCTGGCATGTAATCCATCCATTCTCCGAAATTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTCAAATAATCATCGAAAAAGACCTTTGTTTCCAGTGGAAATCTAACTCCATTACTGGACACCACAAAGCATTAATGATACTTTTTTAAACCTGCTAACGATAGTGTACAAC
ORB     AT-rich region
The information of repeat sequences

Motif SKTTCCAGTGGAAAY

StartP-valueSite
5343.28e-09TCCGAAATTGGGTTCCAGTGGAAATGAAACTCTGG
5935.64e-09AAAGACCTTTGTTTCCAGTGGAAATCTAACTCCAT
468.00e-09ATAACGGTATCGTTCCAGCGGAAACTGAAGGGGTC
2703.20e-08CCAGAGTTCTGTTTCCGGTGGAGGCGGGCTTTGGC
182.30e-07ACCAAGGGAACTTTCGATTCGAAACTTAATAACGG

Motif GGGGTC

StartP-valueSite
5594.93e-05GAAACTCTGGGGGGTCTTTCAAATAA
654.93e-05GGAAACTGAAGGGGTCAAAGAACATA

Motif YTTTGG

StartP-valueSite
3101.68e-04CCATATTGTCCTTTGGTTTTTGGTGA
2881.68e-04TGGAGGCGGGCTTTGGCTACTCCCAT
3174.49e-04GTCCTTTGGTTTTTGGTGAAACTCTC
2034.49e-04AATCGTACTATTTTGGTAAACATATG
1594.49e-04GAATGAACATTTTTGGACAGAAAATC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010057 100.0 677 0 0 1 677 1 677 0.0 1251
aORI10010389 96.593 675 22 1 4 677 675 1 0.0 1118
aORI10010387 75.556 495 85 29 129 606 174 649 0.0 211
aORI10010388 75.9 361 66 18 257 606 264 614 3.00999e-42 165
aORI10010394 74.93 359 73 15 257 606 264 614 3.03e-37 148
aORI10010374 90.0 90 9 0 517 606 177 88 8.56e-28 117
aORI10010386 91.139 79 7 0 528 606 537 615 5.15e-25 108
aORI10010395 85.417 96 14 0 511 606 519 614 8.62e-23 100
aORI10010377 85.417 96 14 0 511 606 519 614 8.62e-23 100
aORI10010377 92.308 39 3 0 524 562 298 260 1.89e-09 57
aORI10010301 85.417 96 14 0 511 606 742 837 8.62e-23 100
aORI10010078 91.667 72 6 0 534 605 708 779 8.62e-23 100
aORI10010108 90.141 71 7 0 534 604 771 841 1.44e-20 94
aORI10010304 87.5 72 9 0 534 605 762 833 8.68e-18 84
aORI10010303 87.5 72 7 2 534 604 150 80 3.12e-17 82
aORI10010105 95.0 40 0 2 535 573 64 26 4.07e-11 62
aORI10010105 100.0 30 0 0 534 563 315 344 1.89e-09 57
aORI10010186 88.0 50 6 0 534 583 749 798 1.46e-10 60
aORI10010016 88.0 50 6 0 534 583 133 84 1.46e-10 60
aORI10010262 86.538 52 5 2 511 561 221 171 1.89e-09 57
aORI10010079 100.0 30 0 0 534 563 460 489 1.89e-09 57
aORI10010369 92.308 39 2 1 535 573 172 135 6.81e-09 55
aORI10010295 100.0 29 0 0 535 563 320 348 6.81e-09 55
aORI10010121 100.0 29 0 0 535 563 371 399 6.81e-09 55