RefSeq NC_003413.1
DoriC accession number aORI10010016
OriC length 881 nt
OriC AT content 0.6822
The location of oriC region 15355..16235 nt
Browse in NCBI
OriC map
OriC sequences
ACTTTTTTATCTCCTATTTACTTTGTAACTTTGTAGCTGCAAACCACCTGGGATGCTAAATTTTTCAGCAAAATATAGAAACGTTTCTATGTTGATCTTAAAAACCCCCCAGAGTTTCATTTCCACTGGAACCAGGTTTTGAAAGGTAAGCAATTTTCACGAGTATTACATAAGCCAACGCAAAACTTATAAAGAATTTTACATTTATCTAATGAACATTTATTCAGTAATTAGCCATAATAACTTGTAAAAAAATGAAAAAACTTTCATTATTTTCTGCTTTCTGTTATAAATACGTTCAAAGAAAAATATTTAAATATGCAGTCTACTTAATATGGGAGAGTGTTTGTCACCAGAAAAAATTTATTTTTTCTGGTGTTTGCCGCCCGGCTCCAGTGGAAATGAAACTCTGGGGGACTTCACTTCTGTTTAATAATTGGAAAATGTTAAACAAATTAGATTAATCTAATGAACTAAAAGGTGCAATAATGAACAAATTTTAATGACCATAAATGTTCATTTTGTCTCCACAGGAAATCTGAAGTTCCTGTAGAAATATGTAAACATCAAATGTCCAAAGATGTTCATTCGCTTATCTCATTTCCTGTGGAAGTTTTGGGCTGGGTGTGGAACTTCCACTGGAAAATATTGACATGTTTTTGTCAAGCAAAGGATAAAAACTCAACAGTTAAAGGAATAGTTGCCTTTCCAATGTTTCCTCTATTTCCAATGGAGATACTATATATCTATGGCATTTATCATAACTAAATTATTACATTTAGTTATATGGATGGGGGAAAAATTAACAACATGTGTTATGTTTCCTCTGGAAAATTGATCTATAATAATCTAGGAGCACAATTTCCAATGGAGGGTCATCA
ACTTTTTTATCTCCTATTTACTTTGTAACTTTGTAGCTGCAAACCACCTGGGATGCTAAATTTTTCAGCAAAATATAGAAACGTTTCTATGTTGATCTTAAAAACCCCCCAGAGTTTCATTTCCACTGGAACCAGGTTTTGAAAGGTAAGCAATTTTCACGAGTATTACATAAGCCAACGCAAAACTTATAAAGAATTTTACATTTATCTAATGAACATTTATTCAGTAATTAGCCATAATAACTTGTAAAAAAATGAAAAAACTTTCATTATTTTCTGCTTTCTGTTATAAATACGTTCAAAGAAAAATATTTAAATATGCAGTCTACTTAATATGGGAGAGTGTTTGTCACCAGAAAAAATTTATTTTTTCTGGTGTTTGCCGCCCGGCTCCAGTGGAAATGAAACTCTGGGGGACTTCACTTCTGTTTAATAATTGGAAAATGTTAAACAAATTAGATTAATCTAATGAACTAAAAGGTGCAATAATGAACAAATTTTAATGACCATAAATGTTCATTTTGTCTCCACAGGAAATCTGAAGTTCCTGTAGAAATATGTAAACATCAAATGTCCAAAGATGTTCATTCGCTTATCTCATTTCCTGTGGAAGTTTTGGGCTGGGTGTGGAACTTCCACTGGAAAATATTGACATGTTTTTGTCAAGCAAAGGATAAAAACTCAACAGTTAAAGGAATAGTTGCCTTTCCAATGTTTCCTCTATTTCCAATGGAGATACTATATATCTATGGCATTTATCATAACTAAATTATTACATTTAGTTATATGGATGGGGGAAAAATTAACAACATGTGTTATGTTTCCTCTGGAAAATTGATCTATAATAATCTAGGAGCACAATTTCCAATGGAGGGTCATCA
ACTTTTTTATCTCCTATTTACTTTGTAACTTTGTAGCTGCAAACCACCTGGGATGCTAAATTTTTCAGCAAAATATAGAAACGTTTCTATGTTGATCTTAAAAACCCCCCAGAGTTTCATTTCCACTGGAACCAGGTTTTGAAAGGTAAGCAATTTTCACGAGTATTACATAAGCCAACGCAAAACTTATAAAGAATTTTACATTTATCTAATGAACATTTATTCAGTAATTAGCCATAATAACTTGTAAAAAAATGAAAAAACTTTCATTATTTTCTGCTTTCTGTTATAAATACGTTCAAAGAAAAATATTTAAATATGCAGTCTACTTAATATGGGAGAGTGTTTGTCACCAGAAAAAATTTATTTTTTCTGGTGTTTGCCGCCCGGCTCCAGTGGAAATGAAACTCTGGGGGACTTCACTTCTGTTTAATAATTGGAAAATGTTAAACAAATTAGATTAATCTAATGAACTAAAAGGTGCAATAATGAACAAATTTTAATGACCATAAATGTTCATTTTGTCTCCACAGGAAATCTGAAGTTCCTGTAGAAATATGTAAACATCAAATGTCCAAAGATGTTCATTCGCTTATCTCATTTCCTGTGGAAGTTTTGGGCTGGGTGTGGAACTTCCACTGGAAAATATTGACATGTTTTTGTCAAGCAAAGGATAAAAACTCAACAGTTAAAGGAATAGTTGCCTTTCCAATGTTTCCTCTATTTCCAATGGAGATACTATATATCTATGGCATTTATCATAACTAAATTATTACATTTAGTTATATGGATGGGGGAAAAATTAACAACATGTGTTATGTTTCCTCTGGAAAATTGATCTATAATAATCTAGGAGCACAATTTCCAATGGAGGGTCATCA
ORB     AT-rich region
The information of repeat sequences

Motif MYRDGWGYTNWATTTCCAMTGGAR

StartP-valueSite
6212.25e-12AAGTTTTGGGCTGGGTGTGGAACTTCCACTGGAAAATATTGACA
8501.17e-11CTATAATAATCTAGGAGCACAATTTCCAATGGAGGGTCATCA
1083.23e-11TTAAAAACCCCCCAGAGTTTCATTTCCACTGGAACCAGGTTTTG
8093.22e-10AAAATTAACAACATGTGTTATGTTTCCTCTGGAAAATTGATCTA
7123.61e-10TGCCTTTCCAATGTTTCCTCTATTTCCAATGGAGATACTATATA

Motif RKYTCCWGWRGAAAT

StartP-valueSite
3892.19e-10TTTGCCGCCCGGCTCCAGTGGAAATGAAACTCTGG
5242.50e-08TGTTCATTTTGTCTCCACAGGAAATCTGAAGTTCC
6001.66e-07CGCTTATCTCATTTCCTGTGGAAGTTTTGGGCTGG
5431.86e-07GGAAATCTGAAGTTCCTGTAGAAATATGTAAACAT
3495.46e-07GAGAGTGTTTGTCACCAGAAAAAATTTATTTTTTC

Motif GGGGGA

StartP-valueSite
7933.57e-05TTATATGGATGGGGGAAAAATTAACA
4123.57e-05ATGAAACTCTGGGGGACTTCACTTCT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010186 100.0 881 0 0 1 881 881 1 0.0 1628
aORI10010016 100.0 881 0 0 1 881 1 881 0.0 1628
aORI10010303 94.118 51 2 1 95 144 112 162 1.9e-15 77
aORI10010386 88.136 59 7 0 84 142 592 534 8.85e-14 71
aORI10010304 95.238 42 2 0 95 136 800 759 1.15e-12 68
aORI10010388 86.441 59 8 0 84 142 591 533 4.12e-12 66
aORI10010395 95.122 41 1 1 100 139 576 536 1.48e-11 64
aORI10010394 94.872 39 2 0 104 142 571 533 5.33e-11 62
aORI10010369 94.872 39 2 0 102 140 142 180 5.33e-11 62
aORI10010389 88.0 50 6 0 84 133 95 144 1.92e-10 60
aORI10010374 88.0 50 6 0 84 133 111 160 1.92e-10 60
aORI10010262 89.583 48 4 1 95 142 161 207 1.92e-10 60
aORI10010078 87.037 54 5 2 84 136 757 705 1.92e-10 60
aORI10010057 88.0 50 6 0 84 133 583 534 1.92e-10 60
aORI10010387 100.0 31 0 0 386 416 574 604 6.89e-10 58
aORI10010295 100.0 31 0 0 102 132 350 320 6.89e-10 58
aORI10010121 100.0 31 0 0 102 132 401 371 6.89e-10 58
aORI10010108 94.737 38 1 1 100 136 805 768 6.89e-10 58
aORI10010105 100.0 31 0 0 103 133 345 315 6.89e-10 58
aORI10010105 94.286 35 1 1 102 136 34 67 3.21e-08 53
aORI10010079 100.0 31 0 0 103 133 490 460 6.89e-10 58
aORI10010377 100.0 29 0 0 105 133 260 288 8.92e-09 55
aORI10010377 100.0 28 0 0 389 416 542 569 3.21e-08 53
aORI10010301 94.444 36 1 1 100 134 799 764 8.92e-09 55