RefSeq NZ_CP014862.1
DoriC accession number aORI10010304
OriC length 902 nt
OriC AT content 0.4135
The location of oriC region 142376..143277 nt
Browse in NCBI
OriC map
OriC sequences
AGCCACCACCGATTTGAGTTCCAGTGGAAATGAAACTCCCCCATGCACATGCAGGCACACATACATGCCGAATAGTGAAAGATCATCACGATCCCATGCAGTTCGGCGAGAGTTATGTTACATATATCCCAGCGGTTGATACGTAGAGGACGGGTATTTCCACTTGAAGCACCGGTCACAGTGGAAAGCAAACCATGATTGCAGTGAAGGGTTTATATCGTTTGTTGGACAGGAAGTTGTCCAAAGGGGCCCTTTGTTTCCAGTGGATAGACAGGGTTCCAGAGGAAACGGCGAGAAGGCAAAGAACATTAATGTTCATTAGACTTTACGTTCGTAAAAGATGAAGACGGGGGAGATTCCGTTTCCACTGAAAGAAGAATGAACATCTATGGACATGAAAATCCGTACTGTAAGGTACAGATAAGCACATTTGAGGTAAACAAAACAACTTAAAATTTCTGAAATGTTATACAAAATCTGCCCCCCTGGGGGTTTTGTTTCCACTGGAAGCGAGCTATGGAAACACCTTAGTTGCATATTGAACTTTGGTGAAAACACTCCCACTTTTTCATCGTTTTTCTTTTTTTATTTCTTTCTATGAACAATGATCAATATTTGGGATAAAATAGGGCCTATAAATGAACATATGATAGAATAAATCAAAATTTTGTGAACGTCTCTAAAGTTTACATTTGAAAATCCCATTATAATTATCGGATTTGCATAGTCCAGCCTGCCTACCCCGTCCTTTTCCCTATCCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTAGATGGTCATCGAAATGGAGTTTTGTTTCCACTGGAAGTATCGGTTCTCTGGGGTACTGATGAGTTCCTCAGTGAGGTTTTTAAGTCATGTTGGGCAGTATCGATC
AGCCACCACCGATTTGAGTTCCAGTGGAAATGAAACTCCCCCATGCACATGCAGGCACACATACATGCCGAATAGTGAAAGATCATCACGATCCCATGCAGTTCGGCGAGAGTTATGTTACATATATCCCAGCGGTTGATACGTAGAGGACGGGTATTTCCACTTGAAGCACCGGTCACAGTGGAAAGCAAACCATGATTGCAGTGAAGGGTTTATATCGTTTGTTGGACAGGAAGTTGTCCAAAGGGGCCCTTTGTTTCCAGTGGATAGACAGGGTTCCAGAGGAAACGGCGAGAAGGCAAAGAACATTAATGTTCATTAGACTTTACGTTCGTAAAAGATGAAGACGGGGGAGATTCCGTTTCCACTGAAAGAAGAATGAACATCTATGGACATGAAAATCCGTACTGTAAGGTACAGATAAGCACATTTGAGGTAAACAAAACAACTTAAAATTTCTGAAATGTTATACAAAATCTGCCCCCCTGGGGGTTTTGTTTCCACTGGAAGCGAGCTATGGAAACACCTTAGTTGCATATTGAACTTTGGTGAAAACACTCCCACTTTTTCATCGTTTTTCTTTTTTTATTTCTTTCTATGAACAATGATCAATATTTGGGATAAAATAGGGCCTATAAATGAACATATGATAGAATAAATCAAAATTTTGTGAACGTCTCTAAAGTTTACATTTGAAAATCCCATTATAATTATCGGATTTGCATAGTCCAGCCTGCCTACCCCGTCCTTTTCCCTATCCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTAGATGGTCATCGAAATGGAGTTTTGTTTCCACTGGAAGTATCGGTTCTCTGGGGTACTGATGAGTTCCTCAGTGAGGTTTTTAAGTCATGTTGGGCAGTATCGATC
AGCCACCACCGATTTGAGTTCCAGTGGAAATGAAACTCCCCCATGCACATGCAGGCACACATACATGCCGAATAGTGAAAGATCATCACGATCCCATGCAGTTCGGCGAGAGTTATGTTACATATATCCCAGCGGTTGATACGTAGAGGACGGGTATTTCCACTTGAAGCACCGGTCACAGTGGAAAGCAAACCATGATTGCAGTGAAGGGTTTATATCGTTTGTTGGACAGGAAGTTGTCCAAAGGGGCCCTTTGTTTCCAGTGGATAGACAGGGTTCCAGAGGAAACGGCGAGAAGGCAAAGAACATTAATGTTCATTAGACTTTACGTTCGTAAAAGATGAAGACGGGGGAGATTCCGTTTCCACTGAAAGAAGAATGAACATCTATGGACATGAAAATCCGTACTGTAAGGTACAGATAAGCACATTTGAGGTAAACAAAACAACTTAAAATTTCTGAAATGTTATACAAAATCTGCCCCCCTGGGGGTTTTGTTTCCACTGGAAGCGAGCTATGGAAACACCTTAGTTGCATATTGAACTTTGGTGAAAACACTCCCACTTTTTCATCGTTTTTCTTTTTTTATTTCTTTCTATGAACAATGATCAATATTTGGGATAAAATAGGGCCTATAAATGAACATATGATAGAATAAATCAAAATTTTGTGAACGTCTCTAAAGTTTACATTTGAAAATCCCATTATAATTATCGGATTTGCATAGTCCAGCCTGCCTACCCCGTCCTTTTCCCTATCCTGGTTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTAGATGGTCATCGAAATGGAGTTTTGTTTCCACTGGAAGTATCGGTTCTCTGGGGTACTGATGAGTTCCTCAGTGAGGTTTTTAAGTCATGTTGGGCAGTATCGATC
ORB     AT-rich region
The information of repeat sequences

Motif TTYTGTTTCCASTGGAA

StartP-valueSite
8171.69e-10CGAAATGGAGTTTTGTTTCCACTGGAAGTATCGGTTC
4931.69e-10CCCCTGGGGGTTTTGTTTCCACTGGAAGCGAGCTATG
7584.14e-09CTTTTCCCTATCCTGGTTCCAGTGGAAATGAAACTCT
3574.14e-09ACGGGGGAGATTCCGTTTCCACTGAAAGAAGAATGAA
2524.74e-09CAAAGGGGCCCTTTGTTTCCAGTGGATAGACAGGGTT

Motif TGAAAMTCCS

StartP-valueSite
316.45e-07CCAGTGGAAATGAAACTCCCCCATGCACAT
6942.39e-06AGTTTACATTTGAAAATCCCATTATAATTA
3963.56e-06TCTATGGACATGAAAATCCGTACTGTAAGG
7765.69e-06CCAGTGGAAATGAAACTCTGGGGGGTCTTT

Motif TTCCASWGGAA

StartP-valueSite
192.56e-07CCGATTTGAGTTCCAGTGGAAATGAAACTCC
2777.35e-07ATAGACAGGGTTCCAGAGGAAACGGCGAGAA
1585.01e-06GGACGGGTATTTCCACTTGAAGCACCGGTCA
1767.17e-06GAAGCACCGGTCACAGTGGAAAGCAAACCAT
2251.52e-05ATATCGTTTGTTGGACAGGAAGTTGTCCAAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010304 100.0 902 0 0 1 902 1 902 0.0 1666
aORI10010303 90.11 91 8 1 743 832 170 80 1.15e-27 117
aORI10010108 87.5 96 12 0 737 832 746 841 5.34e-26 111
aORI10010395 88.043 92 10 1 743 833 522 613 6.91e-25 108
aORI10010386 93.056 72 5 0 762 833 543 614 2.49e-24 106
aORI10010078 86.316 95 13 0 739 833 685 779 8.94e-24 104
aORI10010301 90.541 74 5 2 761 833 764 836 1.5e-21 97
aORI10010394 90.278 72 7 0 762 833 542 613 5.38e-21 95
aORI10010374 90.278 72 7 0 762 833 160 89 5.38e-21 95
aORI10010377 84.946 93 13 1 742 833 521 613 1.94e-20 94
aORI10010377 100.0 29 0 0 762 790 288 260 9.13e-09 55
aORI10010387 84.783 92 12 2 743 833 558 648 6.96e-20 92
aORI10010388 88.889 72 8 0 762 833 542 613 2.5e-19 90
aORI10010389 87.5 72 9 0 762 833 144 73 1.16e-17 84
aORI10010057 87.5 72 9 0 762 833 534 605 1.16e-17 84
aORI10010186 95.238 42 2 0 759 800 746 787 1.17e-12 68
aORI10010016 95.238 42 2 0 759 800 136 95 1.17e-12 68
aORI10010262 92.5 40 2 1 762 801 198 160 2.54e-09 57
aORI10010105 100.0 30 0 0 762 791 315 344 2.54e-09 57
aORI10010105 92.308 39 2 1 756 794 71 34 9.13e-09 55
aORI10010079 100.0 30 0 0 762 791 460 489 2.54e-09 57
aORI10010369 100.0 29 0 0 763 791 172 144 9.13e-09 55
aORI10010295 100.0 29 0 0 763 791 320 348 9.13e-09 55
aORI10010121 100.0 29 0 0 763 791 371 399 9.13e-09 55