RefSeq NC_006624.1
DoriC accession number aORI10010021
OriC length 907 nt
OriC AT content 0.6108
The location of oriC region 1711251..1712157 nt
Browse in NCBI
OriC map
OriC sequences
GCAAGGGGTTAAAAACGTTGGGACGTGGTTAAGTGAACTTTAATGAACATAAGAATACCACTAGGCACAAGTTTTCCAGTGGAAACGGAACTCTTTTTCGATACTCATCGAAAAGACCCCCCAGAGTTTTATTTCCACTGGAACCAACTTTCGGAGAATGGATGGATTTGATGGCTTTAAACAACAGAAAGGGTATTTTTAAAGCGTCTGTGTCAATGTAAATATGATTTTGTTCATTTAAACTTTGTTCTTTCAGTATTTTTTCAATCTTACATCTTAATACCCGCTAATTATTGAACATTGTTTATGGAAAATTATAAATACATGATGGGAAAGAAAAAGCGGGAGTGTTTGCACCAAAATTCGATATTGAAAATGGGTGTAGCAACGAAAGCTGCCTCCACTGGAAACAGAACTCTGGGGGACTACAAAATTGTTTATTTTTTGAGATTGCGAAAACAAAGATGTTTTCTAAAAATGATCCCTTTTGTCCATCATTGTTCGTGTTTTCATGTATATCCCTGTTCATTCCTCTTTCAGTGGAAATAGGCACACCTACCGATGTTTTGTTTGTCTAATGCAAACTTGTATGTGCATCCCTGATCATTGCTTGCTTCGCGTTTCCTCTGGAGAGGTCTTTTTGCACAGGTTAGAACTGGAACTTCGAGTGGAATTCTTTGACAGCTCCATGTTCAACAATCCATATAAACCAGCGGCCTACACATAGGTATGCCTTCCAGTGTATCCGCTGGTTCCTGTGGAGTCCCTCGTGAATGTTCAATATTTCCCCATATTTCCTATCAAAATGTTGAAATAAGGATATGTACTGGTCATTTCGATGGAAAGCGCACTATCATATTGACGGAACGACTTCCATCGAGTATGATTTCAAGTGGAGAGTGGGACG
GCAAGGGGTTAAAAACGTTGGGACGTGGTTAAGTGAACTTTAATGAACATAAGAATACCACTAGGCACAAGTTTTCCAGTGGAAACGGAACTCTTTTTCGATACTCATCGAAAAGACCCCCCAGAGTTTTATTTCCACTGGAACCAACTTTCGGAGAATGGATGGATTTGATGGCTTTAAACAACAGAAAGGGTATTTTTAAAGCGTCTGTGTCAATGTAAATATGATTTTGTTCATTTAAACTTTGTTCTTTCAGTATTTTTTCAATCTTACATCTTAATACCCGCTAATTATTGAACATTGTTTATGGAAAATTATAAATACATGATGGGAAAGAAAAAGCGGGAGTGTTTGCACCAAAATTCGATATTGAAAATGGGTGTAGCAACGAAAGCTGCCTCCACTGGAAACAGAACTCTGGGGGACTACAAAATTGTTTATTTTTTGAGATTGCGAAAACAAAGATGTTTTCTAAAAATGATCCCTTTTGTCCATCATTGTTCGTGTTTTCATGTATATCCCTGTTCATTCCTCTTTCAGTGGAAATAGGCACACCTACCGATGTTTTGTTTGTCTAATGCAAACTTGTATGTGCATCCCTGATCATTGCTTGCTTCGCGTTTCCTCTGGAGAGGTCTTTTTGCACAGGTTAGAACTGGAACTTCGAGTGGAATTCTTTGACAGCTCCATGTTCAACAATCCATATAAACCAGCGGCCTACACATAGGTATGCCTTCCAGTGTATCCGCTGGTTCCTGTGGAGTCCCTCGTGAATGTTCAATATTTCCCCATATTTCCTATCAAAATGTTGAAATAAGGATATGTACTGGTCATTTCGATGGAAAGCGCACTATCATATTGACGGAACGACTTCCATCGAGTATGATTTCAAGTGGAGAGTGGGACG
GCAAGGGGTTAAAAACGTTGGGACGTGGTTAAGTGAACTTTAATGAACATAAGAATACCACTAGGCACAAGTTTTCCAGTGGAAACGGAACTCTTTTTCGATACTCATCGAAAAGACCCCCCAGAGTTTTATTTCCACTGGAACCAACTTTCGGAGAATGGATGGATTTGATGGCTTTAAACAACAGAAAGGGTATTTTTAAAGCGTCTGTGTCAATGTAAATATGATTTTGTTCATTTAAACTTTGTTCTTTCAGTATTTTTTCAATCTTACATCTTAATACCCGCTAATTATTGAACATTGTTTATGGAAAATTATAAATACATGATGGGAAAGAAAAAGCGGGAGTGTTTGCACCAAAATTCGATATTGAAAATGGGTGTAGCAACGAAAGCTGCCTCCACTGGAAACAGAACTCTGGGGGACTACAAAATTGTTTATTTTTTGAGATTGCGAAAACAAAGATGTTTTCTAAAAATGATCCCTTTTGTCCATCATTGTTCGTGTTTTCATGTATATCCCTGTTCATTCCTCTTTCAGTGGAAATAGGCACACCTACCGATGTTTTGTTTGTCTAATGCAAACTTGTATGTGCATCCCTGATCATTGCTTGCTTCGCGTTTCCTCTGGAGAGGTCTTTTTGCACAGGTTAGAACTGGAACTTCGAGTGGAATTCTTTGACAGCTCCATGTTCAACAATCCATATAAACCAGCGGCCTACACATAGGTATGCCTTCCAGTGTATCCGCTGGTTCCTGTGGAGTCCCTCGTGAATGTTCAATATTTCCCCATATTTCCTATCAAAATGTTGAAATAAGGATATGTACTGGTCATTTCGATGGAAAGCGCACTATCATATTGACGGAACGACTTCCATCGAGTATGATTTCAAGTGGAGAGTGGGACG
ORB     AT-rich region
The information of repeat sequences

Motif TTCCACTGGAAASVGMWYTCT

StartP-valueSite
3991.28e-11CGAAAGCTGCCTCCACTGGAAACAGAACTCTGGGGGACTAC
741.74e-11GGCACAAGTTTTCCAGTGGAAACGGAACTCTTTTTCGATAC
1331.39e-09AGAGTTTTATTTCCACTGGAACCAACTTTCGGAGAATGGAT
8346.13e-09GTACTGGTCATTTCGATGGAAAGCGCACTATCATATTGACG
6229.17e-09TGCTTCGCGTTTCCTCTGGAGAGGTCTTTTTGCACAGGTTA

Motif TTCCAGTGGA

StartP-valueSite
6631.72e-06GAACTGGAACTTCGAGTGGAATTCTTTGAC
7532.64e-06TATCCGCTGGTTCCTGTGGAGTCCCTCGTG
8883.91e-06CGAGTATGATTTCAAGTGGAGAGTGGGACG
7355.21e-06TAGGTATGCCTTCCAGTGTATCCGCTGGTT
5356.64e-06TTCATTCCTCTTTCAGTGGAAATAGGCACA

Motif TKCRWDYTTDYATSTDHATMCCYGHTMATTVYT

StartP-valueSite
5791.94e-16GTTTGTCTAATGCAAACTTGTATGTGCATCCCTGATCATTGCTTGCTTCGCGT
5015.70e-15TCCATCATTGTTCGTGTTTTCATGTATATCCCTGTTCATTCCTCTTTCAGTGG
2633.77e-14TCAGTATTTTTTCAATCTTACATCTTAATACCCGCTAATTATTGAACATTGTT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010021 100.0 907 0 0 1 907 1 907 0.0 1676
aORI10010301 81.668 911 143 21 8 905 902 3 0.0 736
aORI10010389 72.938 388 70 29 70 440 69 438 3.23e-23 102