RefSeq NZ_CP015106.1
DoriC accession number aORI10010388
OriC length 684 nt
OriC AT content 0.405
The location of oriC region 1531396..1532079 nt
Browse in NCBI
OriC map
OriC sequences
GCGAACCACCAGTAGAAATTGGGCAAAGGGGTTAATAACGTTACACTCGAAACAGGTTTCCACCGGAAGCGAAGGGGTTTTCAGCACACTTCTGTACTCCGAAAGTTTCCATTTGTAAACGAACAGATGAACCCATTCGTCCACTTCCACTGAAAGGAGAATGAACATGAATGAACATCAAAAAGCATACATCATAGCCCATGAAAGGGCATTTTGGGAAAACATCAATGTTAACATTACGGCAAAAAGATTAACGAAATTAACCCCCAGGGAGTTTCGTTTCCTGTGGAGCGGGGTTATTGCTACTCCCCAATACTGCTTGTACTTTTGGTGAAACTCTCCCGTCTTCTCTACAACTTCTAATATTTATACATTTTCATGAACAATGTTCATAAAAAAGATGCAATTTAAAGTAGTGATGAAAGATAGTTCAGTAAGTCACCAACACTCTTTAAAAATTGTGAATTTGCTCTTTGTAATCTGCCTTATAAATCCCCCTTTCCATATCCATTGGCCTCAAATCCGTCCATAGTCAAAACTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCATTCAGATGGACATCGAAAAAGACCTCTGTTTCCACTGGAAAAATGAGTCCATCCGTGGATGTACTGGGACATGGGTGATAATTTTTTAAAGCAGGTGTCATAGTGTACACC
GCGAACCACCAGTAGAAATTGGGCAAAGGGGTTAATAACGTTACACTCGAAACAGGTTTCCACCGGAAGCGAAGGGGTTTTCAGCACACTTCTGTACTCCGAAAGTTTCCATTTGTAAACGAACAGATGAACCCATTCGTCCACTTCCACTGAAAGGAGAATGAACATGAATGAACATCAAAAAGCATACATCATAGCCCATGAAAGGGCATTTTGGGAAAACATCAATGTTAACATTACGGCAAAAAGATTAACGAAATTAACCCCCAGGGAGTTTCGTTTCCTGTGGAGCGGGGTTATTGCTACTCCCCAATACTGCTTGTACTTTTGGTGAAACTCTCCCGTCTTCTCTACAACTTCTAATATTTATACATTTTCATGAACAATGTTCATAAAAAAGATGCAATTTAAAGTAGTGATGAAAGATAGTTCAGTAAGTCACCAACACTCTTTAAAAATTGTGAATTTGCTCTTTGTAATCTGCCTTATAAATCCCCCTTTCCATATCCATTGGCCTCAAATCCGTCCATAGTCAAAACTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCATTCAGATGGACATCGAAAAAGACCTCTGTTTCCACTGGAAAAATGAGTCCATCCGTGGATGTACTGGGACATGGGTGATAATTTTTTAAAGCAGGTGTCATAGTGTACACC
GCGAACCACCAGTAGAAATTGGGCAAAGGGGTTAATAACGTTACACTCGAAACAGGTTTCCACCGGAAGCGAAGGGGTTTTCAGCACACTTCTGTACTCCGAAAGTTTCCATTTGTAAACGAACAGATGAACCCATTCGTCCACTTCCACTGAAAGGAGAATGAACATGAATGAACATCAAAAAGCATACATCATAGCCCATGAAAGGGCATTTTGGGAAAACATCAATGTTAACATTACGGCAAAAAGATTAACGAAATTAACCCCCAGGGAGTTTCGTTTCCTGTGGAGCGGGGTTATTGCTACTCCCCAATACTGCTTGTACTTTTGGTGAAACTCTCCCGTCTTCTCTACAACTTCTAATATTTATACATTTTCATGAACAATGTTCATAAAAAAGATGCAATTTAAAGTAGTGATGAAAGATAGTTCAGTAAGTCACCAACACTCTTTAAAAATTGTGAATTTGCTCTTTGTAATCTGCCTTATAAATCCCCCTTTCCATATCCATTGGCCTCAAATCCGTCCATAGTCAAAACTGGGTTCCAGTGGAAATGAAACTCTGGGGGGTCATTCAGATGGACATCGAAAAAGACCTCTGTTTCCACTGGAAAAATGAGTCCATCCGTGGATGTACTGGGACATGGGTGATAATTTTTTAAAGCAGGTGTCATAGTGTACACC
ORB     AT-rich region
The information of repeat sequences

Motif GTTTCCABTGGAA

StartP-valueSite
6012.49e-08AAAGACCTCTGTTTCCACTGGAAAAATGAGTCC
5426.57e-08GTCAAAACTGGGTTCCAGTGGAAATGAAACTCT
569.36e-08CTCGAAACAGGTTTCCACCGGAAGCGAAGGGGT
2792.49e-07AGGGAGTTTCGTTTCCTGTGGAGCGGGGTTATT
1059.52e-07TACTCCGAAAGTTTCCATTTGTAAACGAACAGA

Motif GGGGTT

StartP-valueSite
2931.12e-04CCTGTGGAGCGGGGTTATTGCTACTC
741.12e-04CGGAAGCGAAGGGGTTTTCAGCACAC
281.12e-04ATTGGGCAAAGGGGTTAATAACGTTA
5661.92e-04TGAAACTCTGGGGGGTCATTCAGATG

Motif ATRARYCCMYYYKTSSAYDTMCWBKG

StartP-valueSite
1273.80e-13AAACGAACAGATGAACCCATTCGTCCACTTCCACTGAAAGGAGAAT
6162.84e-12CACTGGAAAAATGAGTCCATCCGTGGATGTACTGGGACATGGGTGA
4888.88e-12AATCTGCCTTATAAATCCCCCTTTCCATATCCATTGGCCTCAAATC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010388 100.0 684 0 0 1 684 1 684 0.0 1264
aORI10010394 94.868 682 35 0 1 682 1 682 0.0 1066
aORI10010386 79.683 694 113 22 4 682 4 684 0.0 475
aORI10010387 74.141 495 101 24 142 622 177 658 0.0 180
aORI10010057 75.9 361 66 18 264 614 257 606 3.05063e-42 165
aORI10010389 75.758 363 64 21 264 614 422 72 3.94003e-41 161
aORI10010374 87.129 101 12 1 517 616 186 86 1.12e-26 113
aORI10010395 91.463 82 6 1 535 616 536 616 4.02e-26 111
aORI10010377 90.123 81 8 0 536 616 536 616 1.87e-24 106
aORI10010377 94.595 37 2 0 534 570 296 260 5.32e-10 58
aORI10010108 91.667 72 4 2 542 612 771 841 3.13e-22 99
aORI10010301 84.0 100 15 1 517 615 739 838 4.05e-21 95
aORI10010078 90.411 73 5 2 542 613 708 779 4.05e-21 95
aORI10010304 88.889 72 8 0 542 613 762 833 1.89e-19 90
aORI10010303 87.5 72 7 2 542 612 150 80 3.16e-17 82
aORI10010262 90.385 52 4 1 519 569 222 171 8.83e-13 68
aORI10010186 86.441 59 8 0 533 591 740 798 3.18e-12 66
aORI10010016 86.441 59 8 0 533 591 142 84 3.18e-12 66
aORI10010105 100.0 30 0 0 542 571 315 344 1.91e-09 57
aORI10010105 100.0 28 0 0 543 570 64 37 2.47e-08 53
aORI10010079 100.0 30 0 0 542 571 460 489 1.91e-09 57
aORI10010369 100.0 29 0 0 543 571 172 144 6.88e-09 55
aORI10010295 100.0 29 0 0 543 571 320 348 6.88e-09 55
aORI10010121 100.0 29 0 0 543 571 371 399 6.88e-09 55