RefSeq NZ_CP014855.1
DoriC accession number aORI10010303
OriC length 985 nt
OriC AT content 0.3888
The location of oriC region 1617815..1618799 nt
Browse in NCBI
OriC map
OriC sequences
TTTGGAGACATCTTCACTTATACCAACGGGTCTAACGGCAAATAAAGGGACATTGTCCTCTTCTTTTTATTGGCTTCACTCCACTGGAAACAAAACCTCTTTTCGATGCCCATCTTAAAGACCCCCCAGAGTTTCATTTCCACTGGAACCAGGATTTGGAAAAAGGACGGACTAGCGAGGATTTACAAAGATACAGAAACTTTAACTCTAAGTTTGTGTATAGAAACCCCAGTTGGGTTCAATCAAAACTTAAATAATTTTTAAAAATATCCATTTATTGGGAACAATTTCGGCTAAATTCTAGACAATGTTCATAGAAAAAAATAAAATAGGAAAGTTGCATAGAAAATGGGAGTGTTTTCACCAAAAATTGACGATCCATTTGGGTGTAGCTAAAACCCGCTTCCAGTGGAAATGGAACTCTGGGGGACTACAAAACTATTTAACAATTAGATTTTTTCAAGCGTCGTTGTTTTCGTGAACTTCTCATATGTGCACCATAATGAACTTGTTTTTGTGTACATACCTGTTCATTTCTCGTCCATTGGAAATCCCTGCTCTGTGCTTCGGAGATTTTTCAAATGTAAAATATCATGAACATCTTTGTGCTTCTGCACTTGGGGATTTCCTTTGGAACACCCGGACTTCCCCTGAAGAACTCGAAGTGTGTTGTCATGAACTTGTTAAACTATCCGTTGTTGCCTGTGGAATAACTTCTCGATTTTGATTTCTAGATTTTCCGTGCACTTTCTTTTGAACAACCTCATGACAAGCAAAGGATATAAACCCCTCAATTGATATGACCTTGCTTTCCACTGGGTCTAATGCTTCCAGTGGAGATGGTCATGATATCCTGGAGAGTATCTCGTCAGTATGGCAAAAATATTTGTTAATAATTGGAGATTTGCATCTAATATGGTCTGAAATCTGATGATTTGGCGGCTGTTGAGTTTCACTTCCACTGGAGCTCGAATCGGTGAGGGCC
TTTGGAGACATCTTCACTTATACCAACGGGTCTAACGGCAAATAAAGGGACATTGTCCTCTTCTTTTTATTGGCTTCACTCCACTGGAAACAAAACCTCTTTTCGATGCCCATCTTAAAGACCCCCCAGAGTTTCATTTCCACTGGAACCAGGATTTGGAAAAAGGACGGACTAGCGAGGATTTACAAAGATACAGAAACTTTAACTCTAAGTTTGTGTATAGAAACCCCAGTTGGGTTCAATCAAAACTTAAATAATTTTTAAAAATATCCATTTATTGGGAACAATTTCGGCTAAATTCTAGACAATGTTCATAGAAAAAAATAAAATAGGAAAGTTGCATAGAAAATGGGAGTGTTTTCACCAAAAATTGACGATCCATTTGGGTGTAGCTAAAACCCGCTTCCAGTGGAAATGGAACTCTGGGGGACTACAAAACTATTTAACAATTAGATTTTTTCAAGCGTCGTTGTTTTCGTGAACTTCTCATATGTGCACCATAATGAACTTGTTTTTGTGTACATACCTGTTCATTTCTCGTCCATTGGAAATCCCTGCTCTGTGCTTCGGAGATTTTTCAAATGTAAAATATCATGAACATCTTTGTGCTTCTGCACTTGGGGATTTCCTTTGGAACACCCGGACTTCCCCTGAAGAACTCGAAGTGTGTTGTCATGAACTTGTTAAACTATCCGTTGTTGCCTGTGGAATAACTTCTCGATTTTGATTTCTAGATTTTCCGTGCACTTTCTTTTGAACAACCTCATGACAAGCAAAGGATATAAACCCCTCAATTGATATGACCTTGCTTTCCACTGGGTCTAATGCTTCCAGTGGAGATGGTCATGATATCCTGGAGAGTATCTCGTCAGTATGGCAAAAATATTTGTTAATAATTGGAGATTTGCATCTAATATGGTCTGAAATCTGATGATTTGGCGGCTGTTGAGTTTCACTTCCACTGGAGCTCGAATCGGTGAGGGCC
TTTGGAGACATCTTCACTTATACCAACGGGTCTAACGGCAAATAAAGGGACATTGTCCTCTTCTTTTTATTGGCTTCACTCCACTGGAAACAAAACCTCTTTTCGATGCCCATCTTAAAGACCCCCCAGAGTTTCATTTCCACTGGAACCAGGATTTGGAAAAAGGACGGACTAGCGAGGATTTACAAAGATACAGAAACTTTAACTCTAAGTTTGTGTATAGAAACCCCAGTTGGGTTCAATCAAAACTTAAATAATTTTTAAAAATATCCATTTATTGGGAACAATTTCGGCTAAATTCTAGACAATGTTCATAGAAAAAAATAAAATAGGAAAGTTGCATAGAAAATGGGAGTGTTTTCACCAAAAATTGACGATCCATTTGGGTGTAGCTAAAACCCGCTTCCAGTGGAAATGGAACTCTGGGGGACTACAAAACTATTTAACAATTAGATTTTTTCAAGCGTCGTTGTTTTCGTGAACTTCTCATATGTGCACCATAATGAACTTGTTTTTGTGTACATACCTGTTCATTTCTCGTCCATTGGAAATCCCTGCTCTGTGCTTCGGAGATTTTTCAAATGTAAAATATCATGAACATCTTTGTGCTTCTGCACTTGGGGATTTCCTTTGGAACACCCGGACTTCCCCTGAAGAACTCGAAGTGTGTTGTCATGAACTTGTTAAACTATCCGTTGTTGCCTGTGGAATAACTTCTCGATTTTGATTTCTAGATTTTCCGTGCACTTTCTTTTGAACAACCTCATGACAAGCAAAGGATATAAACCCCTCAATTGATATGACCTTGCTTTCCACTGGGTCTAATGCTTCCAGTGGAGATGGTCATGATATCCTGGAGAGTATCTCGTCAGTATGGCAAAAATATTTGTTAATAATTGGAGATTTGCATCTAATATGGTCTGAAATCTGATGATTTGGCGGCTGTTGAGTTTCACTTCCACTGGAGCTCGAATCGGTGAGGGCC
ORB     AT-rich region
The information of repeat sequences

Motif CDCTTCCABTGGARMTVG

StartP-valueSite
4012.32e-11AGCTAAAACCCGCTTCCAGTGGAAATGGAACTCTGGGG
9541.62e-10TGTTGAGTTTCACTTCCACTGGAGCTCGAATCGGTGAG
8261.11e-09CTGGGTCTAATGCTTCCAGTGGAGATGGTCATGATATC
1359.39e-09CCCAGAGTTTCATTTCCACTGGAACCAGGATTTGGAAA
5371.10e-08CTGTTCATTTCTCGTCCATTGGAAATCCCTGCTCTGTG

Motif ATGAMCWTSTT

StartP-valueSite
6756.16e-07GTGTGTTGTCATGAACTTGTTAAACTATCCG
5036.16e-07GTGCACCATAATGAACTTGTTTTTGTGTACA
5943.55e-06GTAAAATATCATGAACATCTTTGTGCTTCTG
8004.96e-06CTCAATTGATATGACCTTGCTTTCCACTGGG
1069.19e-06CCTCTTTTCGATGCCCATCTTAAAGACCCCC

Motif GAMMMCCCRG

StartP-valueSite
1205.96e-07CCATCTTAAAGACCCCCCAGAGTTTCATTT
2231.46e-06TTTGTGTATAGAAACCCCAGTTGGGTTCAA
6342.47e-06ATTTCCTTTGGAACACCCGGACTTCCCCTG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010303 100.0 985 0 0 1 985 1 985 0.0 1820
aORI10010304 90.11 91 8 1 80 170 832 743 1.26e-27 117
aORI10010395 86.957 92 10 2 80 170 612 522 3.52e-23 102
aORI10010386 84.536 97 11 4 80 174 613 519 2.12e-20 94
aORI10010374 84.783 92 12 2 80 170 90 180 7.62e-20 92
aORI10010387 84.783 92 11 3 80 170 647 558 2.74e-19 90
aORI10010394 88.889 72 6 2 80 150 612 542 9.85e-19 88
aORI10010377 83.696 92 13 2 80 170 612 522 3.54e-18 86
aORI10010377 100.0 29 0 0 122 150 260 288 9.99e-09 55
aORI10010108 83.871 93 12 3 79 170 842 752 3.54e-18 86
aORI10010301 87.671 73 7 2 80 151 835 764 1.27e-17 84
aORI10010389 87.5 72 7 2 80 150 74 144 4.58e-17 82
aORI10010388 87.5 72 7 2 80 150 612 542 4.58e-17 82
aORI10010057 82.474 97 13 4 80 174 604 510 4.58e-17 82
aORI10010078 82.609 92 13 3 80 170 778 689 5.93e-16 79
aORI10010186 94.118 51 2 1 112 162 787 738 2.13e-15 77
aORI10010016 94.118 51 2 1 112 162 95 144 2.13e-15 77
aORI10010262 87.755 49 6 0 123 171 171 219 7.72e-10 58
aORI10010105 100.0 30 0 0 121 150 344 315 2.78e-09 57
aORI10010105 94.444 36 0 2 118 153 34 67 9.99e-09 55
aORI10010079 100.0 30 0 0 121 150 489 460 2.78e-09 57
aORI10010369 100.0 29 0 0 121 149 144 172 9.99e-09 55
aORI10010295 100.0 29 0 0 121 149 348 320 9.99e-09 55
aORI10010121 100.0 29 0 0 121 149 399 371 9.99e-09 55