RefSeq NZ_CP008887.1
DoriC accession number aORI10010377
OriC length 702 nt
OriC AT content 0.3932
The location of oriC region 425720..426421 nt
Browse in NCBI
OriC map
OriC sequences
CTCCACAGGAACCACCCTAAGAAATACGATGTGGGGACATTAATGGTTTGCCCTTCCACGAGAAACGGGAAAGTTTAGTGCACAGGTATGTGCACGAAAATTTGCATTTGGAAACACTAAAAAAGATAGGGCCACTTATTTCCACTGAAAGAGAAATGAACATAAATGAACAGCCACAAAAGAGCATTAGTGAACTTTACAATACAAACCAGTTAAATAGAAATCGTTACTATTTTGCAGAAGTTAAACAGCACATATCCCCCCCAGAGTTTCATTTCCACTGGAACCGACTTTTGGAAGCTTCCAATAGAAGACCGTTTGTTTGTTGGTAAAAGCTCCCGTTCTTTTTTTCTGCGCTGGTTTTTATATTTTTCTATGAACATTCGACGAATTTGTCTGGAATTTCAACCAGAATTTCTGAACGACATCATAAACCATGGGAAAACTCACTGAACAACATGATGGCTACATACCTCAAAAATCCATCATCTTGGTGTTTGCATTTAGCCACCCATCTAAACCCGTCCTTTTTCCGAAAGTGGGCTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGGCCATCGAAAAAGACCTTTATTTCCACTGGAAAAACTGGTCTTTGTAGTATTTTTCTGAACATTTCTGGATAGTTTTGTGGTGGGGGTATATTTTTAAGTTTTGAGTGGAAACCATCATAC
CTCCACAGGAACCACCCTAAGAAATACGATGTGGGGACATTAATGGTTTGCCCTTCCACGAGAAACGGGAAAGTTTAGTGCACAGGTATGTGCACGAAAATTTGCATTTGGAAACACTAAAAAAGATAGGGCCACTTATTTCCACTGAAAGAGAAATGAACATAAATGAACAGCCACAAAAGAGCATTAGTGAACTTTACAATACAAACCAGTTAAATAGAAATCGTTACTATTTTGCAGAAGTTAAACAGCACATATCCCCCCCAGAGTTTCATTTCCACTGGAACCGACTTTTGGAAGCTTCCAATAGAAGACCGTTTGTTTGTTGGTAAAAGCTCCCGTTCTTTTTTTCTGCGCTGGTTTTTATATTTTTCTATGAACATTCGACGAATTTGTCTGGAATTTCAACCAGAATTTCTGAACGACATCATAAACCATGGGAAAACTCACTGAACAACATGATGGCTACATACCTCAAAAATCCATCATCTTGGTGTTTGCATTTAGCCACCCATCTAAACCCGTCCTTTTTCCGAAAGTGGGCTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGGCCATCGAAAAAGACCTTTATTTCCACTGGAAAAACTGGTCTTTGTAGTATTTTTCTGAACATTTCTGGATAGTTTTGTGGTGGGGGTATATTTTTAAGTTTTGAGTGGAAACCATCATAC
CTCCACAGGAACCACCCTAAGAAATACGATGTGGGGACATTAATGGTTTGCCCTTCCACGAGAAACGGGAAAGTTTAGTGCACAGGTATGTGCACGAAAATTTGCATTTGGAAACACTAAAAAAGATAGGGCCACTTATTTCCACTGAAAGAGAAATGAACATAAATGAACAGCCACAAAAGAGCATTAGTGAACTTTACAATACAAACCAGTTAAATAGAAATCGTTACTATTTTGCAGAAGTTAAACAGCACATATCCCCCCCAGAGTTTCATTTCCACTGGAACCGACTTTTGGAAGCTTCCAATAGAAGACCGTTTGTTTGTTGGTAAAAGCTCCCGTTCTTTTTTTCTGCGCTGGTTTTTATATTTTTCTATGAACATTCGACGAATTTGTCTGGAATTTCAACCAGAATTTCTGAACGACATCATAAACCATGGGAAAACTCACTGAACAACATGATGGCTACATACCTCAAAAATCCATCATCTTGGTGTTTGCATTTAGCCACCCATCTAAACCCGTCCTTTTTCCGAAAGTGGGCTCCAGTGGAAATGAAACTCTGGGGGGTCTTTTCGATGGCCATCGAAAAAGACCTTTATTTCCACTGGAAAAACTGGTCTTTGTAGTATTTTTCTGAACATTTCTGGATAGTTTTGTGGTGGGGGTATATTTTTAAGTTTTGAGTGGAAACCATCATAC
ORB     AT-rich region
The information of repeat sequences

Motif TCCACTGGAA

StartP-valueSite
6047.87e-07GACCTTTATTTCCACTGGAAAAACTGGTCT
2777.87e-07GAGTTTCATTTCCACTGGAACCGACTTTTG
5451.54e-06GAAAGTGGGCTCCAGTGGAAATGAAACTCT
22.36e-06CTCCACAGGAACCACCCTAAG
1413.62e-06GCCACTTATTTCCACTGAAAGAGAAATGAA

Motif GTGGGG

StartP-valueSite
6627.95e-05TAGTTTTGTGGTGGGGGTATATTTTT
317.95e-05GAAATACGATGTGGGGACATTAATGG
5651.31e-04ATGAAACTCTGGGGGGTCTTTTCGAT
5392.14e-04TTTTCCGAAAGTGGGCTCCAGTGGAA

Motif TGAACA

StartP-valueSite
6383.40e-04AGTATTTTTCTGAACATTTCTGGATA
4513.40e-04GAAAACTCACTGAACAACATGATGGC
3773.40e-04TATTTTTCTATGAACATTCGACGAAT
1673.40e-04TGAACATAAATGAACAGCCACAAAAG
1573.40e-04GAAAGAGAAATGAACATAAATGAACA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010377 100.0 702 0 0 1 702 1 702 0.0 1297
aORI10010374 75.07 710 143 28 1 693 701 9 0.0 300
aORI10010395 74.614 713 143 31 1 694 1 694 0.0 279
aORI10010387 87.736 106 11 2 522 626 558 662 1.91e-29 122
aORI10010386 93.827 81 5 0 536 616 537 617 1.91e-29 122
aORI10010394 91.358 81 7 0 536 616 536 616 4.13e-26 111
aORI10010108 88.298 94 10 1 519 612 749 841 4.13e-26 111
aORI10010078 87.368 95 11 1 519 613 686 779 5.35e-25 108
aORI10010388 90.123 81 8 0 536 616 536 616 1.92e-24 106
aORI10010057 85.417 96 14 0 519 614 511 606 8.95e-23 100
aORI10010389 85.556 90 13 0 525 614 161 72 4.16e-21 95
aORI10010304 84.946 93 13 1 521 613 742 833 1.5e-20 94
aORI10010303 83.871 93 11 4 522 612 170 80 2.51e-18 86
aORI10010079 100.0 29 0 0 585 613 149 121 7.06e-09 55
aORI10010186 100.0 28 0 0 542 569 493 466 2.54e-08 53
aORI10010016 100.0 28 0 0 542 569 389 416 2.54e-08 53