RefSeq NC_015680.1
DoriC accession number aORI10010105
OriC length 774 nt
OriC AT content 0.5982
The location of oriC region 1426398..1427171 nt
Browse in NCBI
OriC map
OriC sequences
ATTATCTTCTTACCGCTTCTACAAATATTTGACAAGCCCCCCAGAGTTTCATTTCCACTGGAACAGGGATACAGAGGTTCCCCTAGGAAATACGTCTTGACAAACATAGAAAATTTTATGAGTTTTTCTTTACATTTGTTGCGTGAACATTTTTCAGTTAAGGGGAGCTTTTATCGACATGTTATGAACGCTTGTCTAATTTCTCTGCGTTTTCTTTTTAAATCTGTTCATAGAAACATTTATATATGCCCTCGCAGATAGAAAACGGGAGCGTTTGCACCAAAAAATAAAGATCTCTTGGGCGTTTGGCGGCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTTCAAAACCATTTAACTTCCGCCAAATTATTAAGTTGTTATGTTTAATCAAATGCTCTAAAACATCCATTGGTGAACAGCTTTAAATGAACATTTATGCACATTTTCCTTCCACTGGAAAGGTTTCCCGGCTTTTCTAAATGCAAACACTTAATGCTCATCTATGTGCATCAACCTGTGGGATTTCCAGTGGAACCTTTGACATGGAGTTGCTCAACAAAGCATAAAAACCTCGGAGGAAAAAGGTTCCTTGCTTTCCACTGCTTCCCCTGCTTCCAGTGGAAGAGGAATGCTTACATGTTAATTATATCGGCCAGGCTTCGTTACTAAGTGTGATAATATCTACGAAATTTATGCTCCTGTGAGCAATGTTTCCACTGGAAATGCTGGGAAGTGAACCTATGGGGTACGATTTCCAGTGGAGGTACGACG
ATTATCTTCTTACCGCTTCTACAAATATTTGACAAGCCCCCCAGAGTTTCATTTCCACTGGAACAGGGATACAGAGGTTCCCCTAGGAAATACGTCTTGACAAACATAGAAAATTTTATGAGTTTTTCTTTACATTTGTTGCGTGAACATTTTTCAGTTAAGGGGAGCTTTTATCGACATGTTATGAACGCTTGTCTAATTTCTCTGCGTTTTCTTTTTAAATCTGTTCATAGAAACATTTATATATGCCCTCGCAGATAGAAAACGGGAGCGTTTGCACCAAAAAATAAAGATCTCTTGGGCGTTTGGCGGCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTTCAAAACCATTTAACTTCCGCCAAATTATTAAGTTGTTATGTTTAATCAAATGCTCTAAAACATCCATTGGTGAACAGCTTTAAATGAACATTTATGCACATTTTCCTTCCACTGGAAAGGTTTCCCGGCTTTTCTAAATGCAAACACTTAATGCTCATCTATGTGCATCAACCTGTGGGATTTCCAGTGGAACCTTTGACATGGAGTTGCTCAACAAAGCATAAAAACCTCGGAGGAAAAAGGTTCCTTGCTTTCCACTGCTTCCCCTGCTTCCAGTGGAAGAGGAATGCTTACATGTTAATTATATCGGCCAGGCTTCGTTACTAAGTGTGATAATATCTACGAAATTTATGCTCCTGTGAGCAATGTTTCCACTGGAAATGCTGGGAAGTGAACCTATGGGGTACGATTTCCAGTGGAGGTACGACG
ATTATCTTCTTACCGCTTCTACAAATATTTGACAAGCCCCCCAGAGTTTCATTTCCACTGGAACAGGGATACAGAGGTTCCCCTAGGAAATACGTCTTGACAAACATAGAAAATTTTATGAGTTTTTCTTTACATTTGTTGCGTGAACATTTTTCAGTTAAGGGGAGCTTTTATCGACATGTTATGAACGCTTGTCTAATTTCTCTGCGTTTTCTTTTTAAATCTGTTCATAGAAACATTTATATATGCCCTCGCAGATAGAAAACGGGAGCGTTTGCACCAAAAAATAAAGATCTCTTGGGCGTTTGGCGGCCGGTTCCAGTGGAAATGAAACTCTGGGGGGTTCAAAACCATTTAACTTCCGCCAAATTATTAAGTTGTTATGTTTAATCAAATGCTCTAAAACATCCATTGGTGAACAGCTTTAAATGAACATTTATGCACATTTTCCTTCCACTGGAAAGGTTTCCCGGCTTTTCTAAATGCAAACACTTAATGCTCATCTATGTGCATCAACCTGTGGGATTTCCAGTGGAACCTTTGACATGGAGTTGCTCAACAAAGCATAAAAACCTCGGAGGAAAAAGGTTCCTTGCTTTCCACTGCTTCCCCTGCTTCCAGTGGAAGAGGAATGCTTACATGTTAATTATATCGGCCAGGCTTCGTTACTAAGTGTGATAATATCTACGAAATTTATGCTCCTGTGAGCAATGTTTCCACTGGAAATGCTGGGAAGTGAACCTATGGGGTACGATTTCCAGTGGAGGTACGACG
ORB     AT-rich region
The information of repeat sequences

Motif TTCCASTGGAAADG

StartP-valueSite
7157.82e-09TGAGCAATGTTTCCACTGGAAATGCTGGGAAGTG
4521.41e-08CACATTTTCCTTCCACTGGAAAGGTTTCCCGGCT
3171.82e-08TGGCGGCCGGTTCCAGTGGAAATGAAACTCTGGG
532.61e-08AGAGTTTCATTTCCACTGGAACAGGGATACAGAG
6164.12e-08CTTCCCCTGCTTCCAGTGGAAGAGGAATGCTTAC

Motif AACCTVTGGGG

StartP-valueSite
7394.26e-07CTGGGAAGTGAACCTATGGGGTACGATTTCC
3319.35e-07AGTGGAAATGAAACTCTGGGGGGTTCAAAAC
5711.31e-06AAAGCATAAAAACCTCGGAGGAAAAAGGTTC
5151.75e-06TATGTGCATCAACCTGTGGGATTTCCAGTGG

Motif TCCABTGS

StartP-valueSite
7571.87e-05GGGTACGATTTCCAGTGGAGGTACGACG
5281.87e-05CTGTGGGATTTCCAGTGGAACCTTTGAC
5993.75e-05TTCCTTGCTTTCCACTGCTTCCCCTGCT
4086.57e-05CTCTAAAACATCCATTGGTGAACAGCTT
6089.40e-05TTCCACTGCTTCCCCTGCTTCCAGTGGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010105 100.0 774 0 0 1 774 1 774 0.0 1430
aORI10010105 100.0 28 0 0 316 343 64 37 2.81e-08 53
aORI10010105 96.774 31 1 0 37 67 343 313 2.81e-08 53
aORI10010121 85.938 64 6 3 284 345 338 400 3.61e-12 66
aORI10010121 100.0 28 0 0 37 64 398 371 2.81e-08 53
aORI10010389 95.0 40 0 2 26 64 105 143 4.67e-11 62
aORI10010389 100.0 30 0 0 315 344 144 115 2.17e-09 57
aORI10010295 84.375 64 8 2 282 345 288 349 4.67e-11 62
aORI10010295 100.0 28 0 0 37 64 347 320 2.81e-08 53
aORI10010108 93.023 43 2 1 34 75 803 761 4.67e-11 62
aORI10010108 100.0 32 0 0 313 344 769 800 1.68e-10 60
aORI10010078 93.023 43 2 1 34 75 740 698 4.67e-11 62
aORI10010078 100.0 32 0 0 313 344 706 737 1.68e-10 60
aORI10010057 95.0 40 0 2 26 64 573 535 4.67e-11 62
aORI10010057 100.0 30 0 0 315 344 534 563 2.17e-09 57
aORI10010186 100.0 31 0 0 315 345 749 779 6.04e-10 58
aORI10010186 96.875 32 0 1 37 67 777 746 2.81e-08 53
aORI10010079 100.0 31 0 0 315 345 460 490 6.04e-10 58
aORI10010079 100.0 28 0 0 37 64 488 461 2.81e-08 53
aORI10010016 100.0 31 0 0 315 345 133 103 6.04e-10 58
aORI10010016 94.286 35 1 1 34 67 102 136 2.81e-08 53
aORI10010395 96.97 33 1 0 312 344 539 571 2.17e-09 57
aORI10010395 96.875 32 0 1 34 64 574 543 2.81e-08 53
aORI10010394 100.0 30 0 0 315 344 542 571 2.17e-09 57
aORI10010394 100.0 28 0 0 37 64 570 543 2.81e-08 53
aORI10010388 100.0 30 0 0 315 344 542 571 2.17e-09 57
aORI10010388 100.0 28 0 0 37 64 570 543 2.81e-08 53
aORI10010386 100.0 30 0 0 315 344 543 572 2.17e-09 57
aORI10010386 96.875 32 0 1 34 64 575 544 2.81e-08 53
aORI10010377 100.0 30 0 0 314 343 289 260 2.17e-09 57
aORI10010377 100.0 28 0 0 37 64 260 287 2.81e-08 53
aORI10010374 100.0 30 0 0 315 344 160 131 2.17e-09 57
aORI10010374 94.286 35 1 1 31 64 125 159 2.81e-08 53
aORI10010369 100.0 30 0 0 316 345 172 143 2.17e-09 57
aORI10010369 94.286 35 2 0 34 68 142 176 7.81e-09 55
aORI10010304 100.0 30 0 0 315 344 762 791 2.17e-09 57
aORI10010304 92.308 39 2 1 34 71 794 756 7.81e-09 55
aORI10010303 100.0 30 0 0 315 344 150 121 2.17e-09 57
aORI10010303 94.444 36 0 2 34 67 118 153 7.81e-09 55
aORI10010301 100.0 28 0 0 315 342 765 792 2.81e-08 53
aORI10010262 96.774 31 1 0 315 345 198 168 2.81e-08 53